RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TTLL6Q8N841 843 aa15.63■□□□□ 0.09
LTBR-204ENST00000444814 CAPN15O75808 1086 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 FLIIQ13045 1269 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 TRIM28Q13263 835 aaKnown RBP15.62■□□□□ 0.09
LTBR-204ENST00000444814 FKBP5Q13451 457 aaPredicted RBP15.62■□□□□ 0.09
LTBR-204ENST00000444814 SOGA3Q5TF21 947 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 STYK1Q6J9G0 422 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 ZNF622Q969S3 477 aaKnown RBP eCLIP15.62■□□□□ 0.09
LTBR-204ENST00000444814 MASTLQ96GX5 879 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 PHAXQ9H814 394 aaKnown RBP15.62■□□□□ 0.09
LTBR-204ENST00000444814 TRMT112Q9UI30 125 aaKnown RBP15.62■□□□□ 0.09
LTBR-204ENST00000444814 SH3TC1Q8TE82 1336 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 RIC1Q4ADV7 1423 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 NPR1P16066 1061 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 ALDH1B1P30837 517 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 SUSD4Q5VX71 490 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 NLRP10Q86W26 655 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 RPGRQ92834 1020 aaKnown RBP15.62■□□□□ 0.09
LTBR-204ENST00000444814 NLRP3Q96P20 1036 aa15.62■□□□□ 0.09
LTBR-204ENST00000444814 METTL22Q9BUU2 404 aaPredicted RBP15.62■□□□□ 0.09
LTBR-204ENST00000444814 TMX4Q9H1E5 349 aaPredicted RBP15.62■□□□□ 0.09
LTBR-204ENST00000444814 CHRNA5P30532 468 aa15.61■□□□□ 0.09
LTBR-204ENST00000444814 CCDC191Q8NCU4 936 aa15.61■□□□□ 0.09
LTBR-204ENST00000444814 MAP3K2Q9Y2U5 619 aa15.61■□□□□ 0.09
LTBR-204ENST00000444814 UBN2Q6ZU65 1347 aa15.6■□□□□ 0.09
LTBR-204ENST00000444814 NTSR2O95665 410 aa15.6■□□□□ 0.09
LTBR-204ENST00000444814 ALDH1L2Q3SY69 923 aa15.6■□□□□ 0.09
LTBR-204ENST00000444814 MYD88Q99836 296 aa15.6■□□□□ 0.09
LTBR-204ENST00000444814 ISCA1Q9BUE6 129 aa15.6■□□□□ 0.09
LTBR-204ENST00000444814 CWC25Q9NXE8 425 aaPredicted RBP15.6■□□□□ 0.09
LTBR-204ENST00000444814 AFDNP55196 1824 aaKnown RBP15.6■□□□□ 0.09
LTBR-204ENST00000444814 ZBED9Q6R2W3 1325 aa15.6■□□□□ 0.09
LTBR-204ENST00000444814 NUP98P52948 1817 aa15.59■□□□□ 0.09
LTBR-204ENST00000444814 PI4KAP2A4QPH2 592 aa15.59■□□□□ 0.09
LTBR-204ENST00000444814 TCERG1O14776 1098 aaKnown RBP15.59■□□□□ 0.09
LTBR-204ENST00000444814 SRGNP10124 158 aa15.59■□□□□ 0.09
LTBR-204ENST00000444814 PI4KAP1Q8N8J0 262 aa15.59■□□□□ 0.09
LTBR-204ENST00000444814 RBM17Q96I25 401 aaKnown RBP15.59■□□□□ 0.09
LTBR-204ENST00000444814 KLRG2A4D1S0 409 aaPredicted RBP15.58■□□□□ 0.09
LTBR-204ENST00000444814 ERFEQ4G0M1 354 aa15.58■□□□□ 0.09
LTBR-204ENST00000444814 SLC10A5Q5PT55 438 aa15.58■□□□□ 0.09
LTBR-204ENST00000444814 NUTM1Q86Y26 1132 aa15.58■□□□□ 0.09
LTBR-204ENST00000444814 ATP5J2-PTCD1G3V325 749 aa15.58■□□□□ 0.08
LTBR-204ENST00000444814 YBX3P16989 372 aaKnown RBP eCLIP15.58■□□□□ 0.08
LTBR-204ENST00000444814 KCNA3P22001 575 aa15.58■□□□□ 0.08
LTBR-204ENST00000444814 TRMT2AQ8IZ69 625 aaKnown RBP15.58■□□□□ 0.08
LTBR-204ENST00000444814 CCDC24Q8N4L8 307 aa15.58■□□□□ 0.08
LTBR-204ENST00000444814 DNAAF4Q8WXU2 420 aa15.58■□□□□ 0.08
LTBR-204ENST00000444814 PTPRCP08575 1304 aa15.57■□□□□ 0.08
LTBR-204ENST00000444814 GRIPAP1Q4V328 841 aa15.57■□□□□ 0.08
LTBR-204ENST00000444814 ARHGAP27Q6ZUM4 889 aa15.57■□□□□ 0.08
LTBR-204ENST00000444814 ZBTB38Q8NAP3 1195 aaPredicted RBP15.57■□□□□ 0.08
LTBR-204ENST00000444814 CDCA7LQ96GN5 454 aa15.57■□□□□ 0.08
LTBR-204ENST00000444814 SMC4Q9NTJ3 1288 aa15.56■□□□□ 0.08
LTBR-204ENST00000444814 WWC3Q9ULE0 1092 aa15.56■□□□□ 0.08
LTBR-204ENST00000444814 GTF3C3Q9Y5Q9 886 aa15.56■□□□□ 0.08
LTBR-204ENST00000444814 CACNA1FO60840 1977 aa15.56■□□□□ 0.08
LTBR-204ENST00000444814 ANKRD36CQ5JPF3 1778 aa15.55■□□□□ 0.08
LTBR-204ENST00000444814 PCCAP05165 728 aaPredicted RBP15.55■□□□□ 0.08
LTBR-204ENST00000444814 YY1P25490 414 aa15.55■□□□□ 0.08
LTBR-204ENST00000444814 CRY2Q49AN0 593 aa15.55■□□□□ 0.08
LTBR-204ENST00000444814 CC2D2BQ6DHV5 1058 aa15.55■□□□□ 0.08
LTBR-204ENST00000444814 LINS1Q8NG48 757 aa15.55■□□□□ 0.08
LTBR-204ENST00000444814 N4BP2Q86UW6 1770 aaPredicted RBP15.54■□□□□ 0.08
LTBR-204ENST00000444814 DDX46Q7L014 1031 aaKnown RBP15.54■□□□□ 0.08
LTBR-204ENST00000444814 TMC4Q7Z404 712 aa15.54■□□□□ 0.08
LTBR-204ENST00000444814 CRAMP1Q96RY5 1269 aa15.54■□□□□ 0.08
LTBR-204ENST00000444814 ABCC12Q96J65 1359 aa15.54■□□□□ 0.08
LTBR-204ENST00000444814 IRS4O14654 1257 aaPredicted RBP15.53■□□□□ 0.08
LTBR-204ENST00000444814 HOXA10P31260 410 aaPredicted RBP15.53■□□□□ 0.08
LTBR-204ENST00000444814 PRPF40BQ6NWY9 871 aaKnown RBP15.53■□□□□ 0.08
LTBR-204ENST00000444814 G2E3Q7L622 706 aa15.53■□□□□ 0.08
LTBR-204ENST00000444814 KIF16BQ96L93 1317 aa15.53■□□□□ 0.08
LTBR-204ENST00000444814 ARFGEF2Q9Y6D5 1785 aa15.53■□□□□ 0.08
LTBR-204ENST00000444814 ADCY9O60503 1353 aa15.53■□□□□ 0.08
LTBR-204ENST00000444814 IPO8O15397 1037 aaKnown RBP15.53■□□□□ 0.08
LTBR-204ENST00000444814 CCDC93Q567U6 631 aa15.53■□□□□ 0.08
LTBR-204ENST00000444814 FAM89AQ96GI7 184 aa15.53■□□□□ 0.08
LTBR-204ENST00000444814 KIAA1551Q9HCM1 1747 aa15.52■□□□□ 0.08
LTBR-204ENST00000444814 NEURL1BA8MQ27 555 aa15.52■□□□□ 0.07
LTBR-204ENST00000444814 ALDH1L1O75891 902 aa15.52■□□□□ 0.07
LTBR-204ENST00000444814 RTKN2Q8IZC4 609 aa15.52■□□□□ 0.07
LTBR-204ENST00000444814 MRPL50Q8N5N7 158 aaKnown RBP15.52■□□□□ 0.07
LTBR-204ENST00000444814 API5Q9BZZ5 524 aaKnown RBP15.52■□□□□ 0.07
LTBR-204ENST00000444814 CDHR2Q9BYE9 1310 aa15.52■□□□□ 0.07
LTBR-204ENST00000444814 DLEC1Q9Y238 1755 aa15.51■□□□□ 0.07
LTBR-204ENST00000444814 PDE8AO60658 829 aa15.51■□□□□ 0.07
LTBR-204ENST00000444814 BBOX1O75936 387 aa15.51■□□□□ 0.07
LTBR-204ENST00000444814 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
LTBR-204ENST00000444814 CCDC152Q4G0S7 254 aa15.51■□□□□ 0.07
LTBR-204ENST00000444814 SLC4A10Q6U841 1118 aa15.51■□□□□ 0.07
LTBR-204ENST00000444814 SSH1Q8WYL5 1049 aa15.51■□□□□ 0.07
LTBR-204ENST00000444814 SRCIN1Q9C0H9 1055 aa15.51■□□□□ 0.07
LTBR-204ENST00000444814 HDAC5Q9UQL6 1122 aa15.51■□□□□ 0.07
LTBR-204ENST00000444814 C21orf2O43822 256 aa15.5■□□□□ 0.07
LTBR-204ENST00000444814 BRPF1P55201 1214 aaPredicted RBP15.5■□□□□ 0.07
LTBR-204ENST00000444814 SF3B3Q15393 1217 aaKnown RBP15.5■□□□□ 0.07
LTBR-204ENST00000444814 ANKRD31Q8N7Z5 1873 aa15.5■□□□□ 0.07
LTBR-204ENST00000444814 PPEF1O14829 653 aaPredicted RBP15.49■□□□□ 0.07
LTBR-204ENST00000444814 GCKRQ14397 625 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms