RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 GRIPAP1Q4V328 841 aa26.3■■□□□ 1.8
UBE2F-215ENST00000441728 RBM17Q96I25 401 aaKnown RBP26.3■■□□□ 1.8
UBE2F-215ENST00000441728 CRY2Q49AN0 593 aa26.29■■□□□ 1.8
UBE2F-215ENST00000441728 TTLL7Q6ZT98 887 aa26.29■■□□□ 1.8
UBE2F-215ENST00000441728 KDM3BQ7LBC6 1761 aa26.28■■□□□ 1.8
UBE2F-215ENST00000441728 DLG5Q8TDM6 1919 aa26.28■■□□□ 1.8
UBE2F-215ENST00000441728 PPP1R42Q7Z4L9 355 aa26.28■■□□□ 1.8
UBE2F-215ENST00000441728 CNTROBQ8N137 903 aa26.28■■□□□ 1.8
UBE2F-215ENST00000441728 LARGE2Q8N3Y3 721 aa26.28■■□□□ 1.8
UBE2F-215ENST00000441728 NUP98P52948 1817 aa26.28■■□□□ 1.8
UBE2F-215ENST00000441728 TCERG1O14776 1098 aaKnown RBP26.27■■□□□ 1.8
UBE2F-215ENST00000441728 THUMPD2Q9BTF0 503 aaKnown RBP26.27■■□□□ 1.8
UBE2F-215ENST00000441728 IBTKQ9P2D0 1353 aaPredicted RBP26.27■■□□□ 1.8
UBE2F-215ENST00000441728 PPEF1O14829 653 aaPredicted RBP26.26■■□□□ 1.79
UBE2F-215ENST00000441728 ITGBL1O95965 494 aaPredicted RBP26.26■■□□□ 1.79
UBE2F-215ENST00000441728 MAP1SQ66K74 1059 aaPredicted RBP26.26■■□□□ 1.79
UBE2F-215ENST00000441728 TSPYL4Q9UJ04 414 aa26.26■■□□□ 1.79
UBE2F-215ENST00000441728 ABT1Q9ULW3 272 aaKnown RBP26.26■■□□□ 1.79
UBE2F-215ENST00000441728 ERBB4Q15303 1308 aa26.25■■□□□ 1.79
UBE2F-215ENST00000441728 FOXN1O15353 648 aa26.25■■□□□ 1.79
UBE2F-215ENST00000441728 CTCFP49711 727 aaPredicted RBP26.25■■□□□ 1.79
UBE2F-215ENST00000441728 VEGFBP49765 207 aa26.25■■□□□ 1.79
UBE2F-215ENST00000441728 SUSD4Q5VX71 490 aa26.25■■□□□ 1.79
UBE2F-215ENST00000441728 NIM1KQ8IY84 436 aa26.25■■□□□ 1.79
UBE2F-215ENST00000441728 PARP10Q53GL7 1025 aa26.24■■□□□ 1.79
UBE2F-215ENST00000441728 NLRP3Q96P20 1036 aa26.24■■□□□ 1.79
UBE2F-215ENST00000441728 RIC1Q4ADV7 1423 aa26.23■■□□□ 1.79
UBE2F-215ENST00000441728 PCNTO95613 3336 aa26.23■■□□□ 1.79
UBE2F-215ENST00000441728 UBN2Q6ZU65 1347 aa26.23■■□□□ 1.79
UBE2F-215ENST00000441728 HOXA10P31260 410 aaPredicted RBP26.23■■□□□ 1.79
UBE2F-215ENST00000441728 DEFB115Q30KQ5 88 aa26.23■■□□□ 1.79
UBE2F-215ENST00000441728 GIGYF2Q6Y7W6 1299 aaKnown RBP26.23■■□□□ 1.79
UBE2F-215ENST00000441728 CRAMP1Q96RY5 1269 aa26.23■■□□□ 1.79
UBE2F-215ENST00000441728 PLEKHF1Q96S99 279 aa26.23■■□□□ 1.79
UBE2F-215ENST00000441728 EIF2S2P20042 333 aaKnown RBP26.22■■□□□ 1.79
UBE2F-215ENST00000441728 PRDM10Q9NQV6 1147 aa26.22■■□□□ 1.79
UBE2F-215ENST00000441728 PAXIP1Q6ZW49 1069 aaPredicted RBP26.21■■□□□ 1.79
UBE2F-215ENST00000441728 ZNF34Q8IZ26 560 aa26.21■■□□□ 1.79
UBE2F-215ENST00000441728 PPIP5K2O43314 1243 aa26.2■■□□□ 1.78
UBE2F-215ENST00000441728 NTSR2O95665 410 aa26.2■■□□□ 1.78
UBE2F-215ENST00000441728 UTP14AQ9BVJ6 771 aaKnown RBP26.19■■□□□ 1.78
UBE2F-215ENST00000441728 ADAMTSL1Q8N6G6 1762 aa26.18■■□□□ 1.78
UBE2F-215ENST00000441728 LMOD3Q0VAK6 560 aa26.18■■□□□ 1.78
UBE2F-215ENST00000441728 SUPT20HQ8NEM7 779 aa26.18■■□□□ 1.78
UBE2F-215ENST00000441728 RASSF10A6NK89 507 aa26.17■■□□□ 1.78
UBE2F-215ENST00000441728 RIPK4P57078 832 aa26.17■■□□□ 1.78
UBE2F-215ENST00000441728 MAP2K1Q02750 393 aaPredicted RBP26.17■■□□□ 1.78
UBE2F-215ENST00000441728 HSP90AB3PQ58FF7 597 aa26.17■■□□□ 1.78
UBE2F-215ENST00000441728 DDX21Q9NR30 783 aaKnown RBP eCLIP26.17■■□□□ 1.78
UBE2F-215ENST00000441728 SNED1Q8TER0 1413 aa26.16■■□□□ 1.78
UBE2F-215ENST00000441728 USP50Q70EL3 339 aaPredicted RBP26.16■■□□□ 1.78
UBE2F-215ENST00000441728 BEGAINQ9BUH8 593 aa26.16■■□□□ 1.78
UBE2F-215ENST00000441728 WDR33Q9C0J8 1336 aaKnown RBP26.15■■□□□ 1.78
UBE2F-215ENST00000441728 EPS15P42566 896 aa26.15■■□□□ 1.78
UBE2F-215ENST00000441728 ECE1P42892 770 aa26.14■■□□□ 1.78
UBE2F-215ENST00000441728 SCNN1DP51172 638 aa26.14■■□□□ 1.78
UBE2F-215ENST00000441728 LBX1P52954 281 aa26.14■■□□□ 1.78
UBE2F-215ENST00000441728 GRM1Q13255 1194 aa26.14■■□□□ 1.78
UBE2F-215ENST00000441728 AOC3Q16853 763 aa26.14■■□□□ 1.78
UBE2F-215ENST00000441728 VPS33BQ9H267 617 aa26.14■■□□□ 1.78
UBE2F-215ENST00000441728 WBP1LQ9NX94 342 aa26.14■■□□□ 1.78
UBE2F-215ENST00000441728 ATP6V0A2Q9Y487 856 aa26.14■■□□□ 1.78
UBE2F-215ENST00000441728 AIMP1Q12904 312 aaKnown RBP26.13■■□□□ 1.77
UBE2F-215ENST00000441728 DPP8Q6V1X1 898 aaPredicted RBP26.12■■□□□ 1.77
UBE2F-215ENST00000441728 C3orf67Q6ZVT6 689 aa26.12■■□□□ 1.77
UBE2F-215ENST00000441728 NECTIN2Q92692 538 aa26.12■■□□□ 1.77
UBE2F-215ENST00000441728 BABAM1Q9NWV8 329 aa26.12■■□□□ 1.77
UBE2F-215ENST00000441728 ANXA1P04083 346 aa26.11■■□□□ 1.77
UBE2F-215ENST00000441728 DDX46Q7L014 1031 aaKnown RBP26.11■■□□□ 1.77
UBE2F-215ENST00000441728 ADARB2Q9NS39 739 aaKnown RBP26.11■■□□□ 1.77
UBE2F-215ENST00000441728 COL4A5P29400 1685 aa26.11■■□□□ 1.77
UBE2F-215ENST00000441728 ABCC4O15439 1325 aa26.11■■□□□ 1.77
UBE2F-215ENST00000441728 BBOX1O75936 387 aa26.1■■□□□ 1.77
UBE2F-215ENST00000441728 SLC10A5Q5PT55 438 aa26.1■■□□□ 1.77
UBE2F-215ENST00000441728 BCL2L13Q9BXK5 485 aa26.1■■□□□ 1.77
UBE2F-215ENST00000441728 ZNRF3Q9ULT6 936 aa26.1■■□□□ 1.77
UBE2F-215ENST00000441728 COPS6Q7L5N1 327 aa26.09■■□□□ 1.77
UBE2F-215ENST00000441728 MPNDQ8N594 471 aa26.09■■□□□ 1.77
UBE2F-215ENST00000441728 TRMT112Q9UI30 125 aaKnown RBP26.09■■□□□ 1.77
UBE2F-215ENST00000441728 PDIA6Q15084 440 aa26.08■■□□□ 1.77
UBE2F-215ENST00000441728 XAGE3Q8WTP9 111 aa26.08■■□□□ 1.77
UBE2F-215ENST00000441728 CAPNS2Q96L46 248 aa26.08■■□□□ 1.77
UBE2F-215ENST00000441728 GPRC5DQ9NZD1 345 aa26.08■■□□□ 1.77
UBE2F-215ENST00000441728 HCLS1P14317 486 aaPredicted RBP26.07■■□□□ 1.76
UBE2F-215ENST00000441728 TMPOP42166 694 aaKnown RBP26.07■■□□□ 1.76
UBE2F-215ENST00000441728 RALBP1Q15311 655 aa26.07■■□□□ 1.76
UBE2F-215ENST00000441728 NEUROD2Q15784 382 aa26.07■■□□□ 1.76
UBE2F-215ENST00000441728 PROSER3Q2NL68 480 aa26.07■■□□□ 1.76
UBE2F-215ENST00000441728 SP8Q8IXZ3 490 aa26.07■■□□□ 1.76
UBE2F-215ENST00000441728 LAS1LQ9Y4W2 734 aaKnown RBP26.07■■□□□ 1.76
UBE2F-215ENST00000441728 LTBP1Q14766 1721 aa26.07■■□□□ 1.76
UBE2F-215ENST00000441728 SH3TC1Q8TE82 1336 aa26.07■■□□□ 1.76
UBE2F-215ENST00000441728 HSPA8P11142 646 aaKnown RBP26.06■■□□□ 1.76
UBE2F-215ENST00000441728 TNIP1Q15025 636 aa26.06■■□□□ 1.76
UBE2F-215ENST00000441728 CIAPIN1Q6FI81 312 aa26.06■■□□□ 1.76
UBE2F-215ENST00000441728 SLC51AQ86UW1 340 aa26.06■■□□□ 1.76
UBE2F-215ENST00000441728 NLRP10Q86W26 655 aa26.06■■□□□ 1.76
UBE2F-215ENST00000441728 TRAF5O00463 557 aa26.05■■□□□ 1.76
UBE2F-215ENST00000441728 CXCL9Q07325 125 aa26.05■■□□□ 1.76
UBE2F-215ENST00000441728 GPR101Q96P66 508 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms