RNA–Protein interactions for RNA: ENST00000440652.5

UBE2D4-203, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 1,299 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-203ENST00000440652 RNF19BQ6ZMZ0 732 aa9.48□□□□□ -0.89
UBE2D4-203ENST00000440652 ZNF598Q86UK7 904 aaKnown RBP9.48□□□□□ -0.89
UBE2D4-203ENST00000440652 NLRP2Q9NX02 1062 aa9.48□□□□□ -0.89
UBE2D4-203ENST00000440652 CENPBP07199 599 aaPredicted RBP9.47□□□□□ -0.89
UBE2D4-203ENST00000440652 IL2RBP14784 551 aa9.47□□□□□ -0.89
UBE2D4-203ENST00000440652 KRI1Q8N9T8 703 aaKnown RBP9.47□□□□□ -0.89
UBE2D4-203ENST00000440652 KCNH5Q8NCM2 988 aa9.47□□□□□ -0.89
UBE2D4-203ENST00000440652 SYTL4Q96C24 671 aaPredicted RBP9.47□□□□□ -0.89
UBE2D4-203ENST00000440652 PRDM9Q9NQV7 894 aa9.47□□□□□ -0.89
UBE2D4-203ENST00000440652 TFCP2L1Q9NZI6 479 aa9.47□□□□□ -0.89
UBE2D4-203ENST00000440652 HOXA2O43364 376 aa9.46□□□□□ -0.9
UBE2D4-203ENST00000440652 Q3C1V9 767 aa9.46□□□□□ -0.9
UBE2D4-203ENST00000440652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.9
UBE2D4-203ENST00000440652 HLA-CQ95604 372 aa9.46□□□□□ -0.9
UBE2D4-203ENST00000440652 LY75O60449 1722 aa9.45□□□□□ -0.9
UBE2D4-203ENST00000440652 DDX54Q8TDD1 881 aaKnown RBP9.45□□□□□ -0.9
UBE2D4-203ENST00000440652 KTN1Q86UP2 1357 aaKnown RBP9.45□□□□□ -0.9
UBE2D4-203ENST00000440652 USP54Q70EL1 1684 aa9.45□□□□□ -0.9
UBE2D4-203ENST00000440652 ANP32CO43423 234 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 PRR20EP86478 221 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 PRR20CP86479 221 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 PRR20DP86480 221 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 PRR20BP86481 221 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 PRR20AP86496 221 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 NME9Q86XW9 330 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 ANKRD24Q8TF21 1146 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 CARD11Q9BXL7 1154 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 GPBP1L1Q9HC44 474 aaPredicted RBP9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 FCF1Q9Y324 198 aaKnown RBP9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 ADCY9O60503 1353 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 NSD2O96028 1365 aa9.44□□□□□ -0.9
UBE2D4-203ENST00000440652 EVC2Q86UK5 1308 aa9.43□□□□□ -0.9
UBE2D4-203ENST00000440652 TTC21AQ8NDW8 1320 aa9.43□□□□□ -0.9
UBE2D4-203ENST00000440652 HSPA6P17066 643 aa9.43□□□□□ -0.9
UBE2D4-203ENST00000440652 RPIAP49247 311 aa9.43□□□□□ -0.9
UBE2D4-203ENST00000440652 MMP16P51512 607 aa9.43□□□□□ -0.9
UBE2D4-203ENST00000440652 ZNF697Q5TEC3 545 aa9.43□□□□□ -0.9
UBE2D4-203ENST00000440652 LTV1Q96GA3 475 aaPredicted RBP9.43□□□□□ -0.9
UBE2D4-203ENST00000440652 KAT6BQ8WYB5 2073 aa9.43□□□□□ -0.9
UBE2D4-203ENST00000440652 C5P01031 1676 aa9.42□□□□□ -0.9
UBE2D4-203ENST00000440652 FAM208AQ9UK61 1670 aaKnown RBP9.42□□□□□ -0.9
UBE2D4-203ENST00000440652 MEGF6O75095 1541 aa9.42□□□□□ -0.9
UBE2D4-203ENST00000440652 CD163L1Q9NR16 1453 aa9.42□□□□□ -0.9
UBE2D4-203ENST00000440652 GDF9O60383 454 aa9.42□□□□□ -0.9
UBE2D4-203ENST00000440652 SSTR3P32745 418 aaPredicted RBP9.42□□□□□ -0.9
UBE2D4-203ENST00000440652 TRAF7Q6Q0C0 670 aa9.42□□□□□ -0.9
UBE2D4-203ENST00000440652 SLC16A10Q8TF71 515 aa9.42□□□□□ -0.9
UBE2D4-203ENST00000440652 ANKRD36BQ8N2N9 1353 aa9.41□□□□□ -0.9
UBE2D4-203ENST00000440652 GRIN3BO60391 1043 aa9.41□□□□□ -0.9
UBE2D4-203ENST00000440652 GUCA2AQ02747 115 aa9.41□□□□□ -0.9
UBE2D4-203ENST00000440652 SLC27A3Q5K4L6 730 aa9.41□□□□□ -0.9
UBE2D4-203ENST00000440652 COL23A1Q86Y22 540 aaPredicted RBP9.41□□□□□ -0.9
UBE2D4-203ENST00000440652 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
UBE2D4-203ENST00000440652 CCNL1Q9UK58 526 aaPredicted RBP9.41□□□□□ -0.9
UBE2D4-203ENST00000440652 RGPD2P0DJD1 1756 aa9.41□□□□□ -0.9
UBE2D4-203ENST00000440652 TOGARAM1Q9Y4F4 1720 aa9.41□□□□□ -0.9
UBE2D4-203ENST00000440652 SBNO2Q9Y2G9 1366 aa9.4□□□□□ -0.9
UBE2D4-203ENST00000440652 DXOO77932 396 aaKnown RBP9.4□□□□□ -0.9
UBE2D4-203ENST00000440652 PKD2L1Q9P0L9 805 aa9.4□□□□□ -0.9
UBE2D4-203ENST00000440652 ROCK2O75116 1388 aaKnown RBP9.39□□□□□ -0.91
UBE2D4-203ENST00000440652 USP47Q96K76 1375 aa9.39□□□□□ -0.91
UBE2D4-203ENST00000440652 WASHC2AQ641Q2 1341 aa9.39□□□□□ -0.91
UBE2D4-203ENST00000440652 TRIM66O15016 1216 aa9.39□□□□□ -0.91
UBE2D4-203ENST00000440652 SMIM5Q71RC9 77 aa9.39□□□□□ -0.91
UBE2D4-203ENST00000440652 NUTM1Q86Y26 1132 aa9.39□□□□□ -0.91
UBE2D4-203ENST00000440652 YTHDC1Q96MU7 727 aaKnown RBP9.39□□□□□ -0.91
UBE2D4-203ENST00000440652 USP31Q70CQ4 1352 aa9.38□□□□□ -0.91
UBE2D4-203ENST00000440652 CCER2I3L3R5 266 aa9.38□□□□□ -0.91
UBE2D4-203ENST00000440652 TTLL12Q14166 644 aaPredicted RBP9.38□□□□□ -0.91
UBE2D4-203ENST00000440652 GIGYF2Q6Y7W6 1299 aaKnown RBP9.38□□□□□ -0.91
UBE2D4-203ENST00000440652 AMIGO3Q86WK7 504 aa9.38□□□□□ -0.91
UBE2D4-203ENST00000440652 PCDHGC3Q9UN70 934 aa9.38□□□□□ -0.91
UBE2D4-203ENST00000440652 IGSF1Q8N6C5 1336 aa9.37□□□□□ -0.91
UBE2D4-203ENST00000440652 PARP9Q8IXQ6 854 aa9.37□□□□□ -0.91
UBE2D4-203ENST00000440652 TMC1Q8TDI8 760 aa9.37□□□□□ -0.91
UBE2D4-203ENST00000440652 SPIRE2Q8WWL2 714 aa9.37□□□□□ -0.91
UBE2D4-203ENST00000440652 AK7Q96M32 723 aa9.37□□□□□ -0.91
UBE2D4-203ENST00000440652 A0A1W2PP64 1363 aa9.37□□□□□ -0.91
UBE2D4-203ENST00000440652 C4BP0C0L5 1744 aa9.36□□□□□ -0.91
UBE2D4-203ENST00000440652 TAF1LQ8IZX4 1826 aa9.36□□□□□ -0.91
UBE2D4-203ENST00000440652 ST20-MTHFSA0A0A6YYL1 179 aa9.36□□□□□ -0.91
UBE2D4-203ENST00000440652 TNFRSF10AO00220 468 aa9.36□□□□□ -0.91
UBE2D4-203ENST00000440652 FBLN1P23142 703 aa9.36□□□□□ -0.91
UBE2D4-203ENST00000440652 USHBP1Q8N6Y0 703 aa9.36□□□□□ -0.91
UBE2D4-203ENST00000440652 SYMPKQ92797 1274 aaKnown RBP9.36□□□□□ -0.91
UBE2D4-203ENST00000440652 POLR3GLQ9BT43 218 aa9.36□□□□□ -0.91
UBE2D4-203ENST00000440652 KIF7Q2M1P5 1343 aa9.35□□□□□ -0.91
UBE2D4-203ENST00000440652 CICQ96RK0 1608 aaPredicted RBP9.35□□□□□ -0.91
UBE2D4-203ENST00000440652 CD2BP2O95400 341 aaKnown RBP9.35□□□□□ -0.91
UBE2D4-203ENST00000440652 HTRA3P83110 453 aa9.35□□□□□ -0.91
UBE2D4-203ENST00000440652 EDC4Q6P2E9 1401 aaKnown RBP9.35□□□□□ -0.91
UBE2D4-203ENST00000440652 WDR90Q96KV7 1748 aa9.35□□□□□ -0.91
UBE2D4-203ENST00000440652 PALLDQ8WX93 1383 aa9.35□□□□□ -0.91
UBE2D4-203ENST00000440652 DGAT1O75907 488 aa9.34□□□□□ -0.91
UBE2D4-203ENST00000440652 FDX1P10109 184 aa9.34□□□□□ -0.91
UBE2D4-203ENST00000440652 CD2APQ9Y5K6 639 aa9.34□□□□□ -0.91
UBE2D4-203ENST00000440652 UBR3Q6ZT12 1888 aa9.34□□□□□ -0.91
UBE2D4-203ENST00000440652 MAP3K19Q56UN5 1328 aa9.33□□□□□ -0.92
UBE2D4-203ENST00000440652 MOXD2PA6NHM9 499 aa9.33□□□□□ -0.92
UBE2D4-203ENST00000440652 MS4A1P11836 297 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms