RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 CALM2P0DP24 149 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 CALM3P0DP25 149 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 PPP1R42Q7Z4L9 355 aa15.85■□□□□ 0.13
LRCH3-206ENST00000438796 METAP2P50579 478 aaKnown RBP eCLIP15.84■□□□□ 0.13
LRCH3-206ENST00000438796 CCDC183Q5T5S1 534 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 BIN2Q9UBW5 565 aaPredicted RBP15.84■□□□□ 0.13
LRCH3-206ENST00000438796 GJB2P29033 226 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 KIF5BP33176 963 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 UBE3BQ7Z3V4 1068 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 MAATS1Q7Z4T9 603 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 ATP6V1AP38606 617 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 CBX1P83916 185 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 MAP9Q49MG5 647 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 AMPD3Q01432 767 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 PHF8Q9UPP1 1060 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 AFMP43652 599 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 ZSWIM4Q9H7M6 989 aa15.84■□□□□ 0.13
LRCH3-206ENST00000438796 SP4Q02446 784 aa15.83■□□□□ 0.13
LRCH3-206ENST00000438796 CCDC184Q52MB2 194 aa15.83■□□□□ 0.13
LRCH3-206ENST00000438796 GIGYF2Q6Y7W6 1299 aaKnown RBP15.83■□□□□ 0.13
LRCH3-206ENST00000438796 TRERF1Q96PN7 1200 aa15.83■□□□□ 0.13
LRCH3-206ENST00000438796 JAG2Q9Y219 1238 aa15.83■□□□□ 0.13
LRCH3-206ENST00000438796 KIAA1107Q9UPP5 1409 aa15.83■□□□□ 0.13
LRCH3-206ENST00000438796 JADE2Q9NQC1 790 aa15.83■□□□□ 0.13
LRCH3-206ENST00000438796 RIMBP2O15034 1052 aa15.83■□□□□ 0.12
LRCH3-206ENST00000438796 TBCAO75347 108 aaKnown RBP15.83■□□□□ 0.12
LRCH3-206ENST00000438796 PDCL2Q8N4E4 241 aa15.83■□□□□ 0.12
LRCH3-206ENST00000438796 LRRC2Q9BYS8 371 aa15.83■□□□□ 0.12
LRCH3-206ENST00000438796 TAOK3Q9H2K8 898 aa15.83■□□□□ 0.12
LRCH3-206ENST00000438796 EXOC1Q9NV70 894 aa15.83■□□□□ 0.12
LRCH3-206ENST00000438796 ATP2B3Q16720 1220 aa15.83■□□□□ 0.12
LRCH3-206ENST00000438796 PPM1EQ8WY54 764 aa15.83■□□□□ 0.12
LRCH3-206ENST00000438796 MRVI1Q9Y6F6 885 aa15.83■□□□□ 0.12
LRCH3-206ENST00000438796 HMGB1P09429 215 aaKnown RBP15.83■□□□□ 0.12
LRCH3-206ENST00000438796 MCM4P33991 863 aa15.83■□□□□ 0.12
LRCH3-206ENST00000438796 CCDC12Q8WUD4 166 aaPredicted RBP15.83■□□□□ 0.12
LRCH3-206ENST00000438796 BACH2Q9BYV9 841 aa15.83■□□□□ 0.12
LRCH3-206ENST00000438796 FSD2A1L4K1 749 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 HMGB2P26583 209 aaKnown RBP15.82■□□□□ 0.12
LRCH3-206ENST00000438796 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
LRCH3-206ENST00000438796 UBA7P41226 1012 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 TTC21AQ8NDW8 1320 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 LRSAM1Q6UWE0 723 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 STXBP4Q6ZWJ1 553 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 SSH1Q8WYL5 1049 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 ALS2CR12Q96Q35 445 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 SETDB2Q96T68 719 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 FAM107BQ9H098 131 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 ERICH3Q5RHP9 1530 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 STX6O43752 255 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 FERMT1Q9BQL6 677 aa15.82■□□□□ 0.12
LRCH3-206ENST00000438796 CRNKL1Q9BZJ0 848 aaKnown RBP15.82■□□□□ 0.12
LRCH3-206ENST00000438796 EPRSP07814 1512 aaKnown RBP15.81■□□□□ 0.12
LRCH3-206ENST00000438796 ATP2C2O75185 946 aa15.81■□□□□ 0.12
LRCH3-206ENST00000438796 PROCA1Q8NCQ7 364 aaPredicted RBP15.81■□□□□ 0.12
LRCH3-206ENST00000438796 C16orf45Q96MC5 204 aaPredicted RBP15.81■□□□□ 0.12
LRCH3-206ENST00000438796 TTF1Q15361 905 aaPredicted RBP15.81■□□□□ 0.12
LRCH3-206ENST00000438796 IFIT1BQ5T764 474 aaKnown RBP15.81■□□□□ 0.12
LRCH3-206ENST00000438796 IKBKGQ9Y6K9 419 aa15.81■□□□□ 0.12
LRCH3-206ENST00000438796 A0A1W2PRG0 241 aa15.81■□□□□ 0.12
LRCH3-206ENST00000438796 CYP7A1P22680 504 aa15.81■□□□□ 0.12
LRCH3-206ENST00000438796 ZMYND15Q9H091 742 aa15.81■□□□□ 0.12
LRCH3-206ENST00000438796 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
LRCH3-206ENST00000438796 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
LRCH3-206ENST00000438796 SUPT6HQ7KZ85 1726 aaKnown RBP15.81■□□□□ 0.12
LRCH3-206ENST00000438796 ARID5AQ03989 594 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 TBC1D5Q92609 795 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 GBP3Q9H0R5 595 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 FAM83GA6ND36 823 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 LDHCP07864 332 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 ACTN2P35609 894 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 FBXO31Q5XUX0 539 aaPredicted RBP15.8■□□□□ 0.12
LRCH3-206ENST00000438796 TRIM47Q96LD4 638 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 KIF18AQ8NI77 898 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 SSFA2P28290 1259 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 CCDC152Q4G0S7 254 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 HDAC9Q9UKV0 1011 aa15.8■□□□□ 0.12
LRCH3-206ENST00000438796 SLC4A4Q9Y6R1 1079 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 TAF12Q16514 161 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
LRCH3-206ENST00000438796 CTR9Q6PD62 1173 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 OGFOD1Q8N543 542 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 TCHPQ9BT92 498 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 HFM1A2PYH4 1435 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 ANKRD24Q8TF21 1146 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 ORC3Q9UBD5 711 aaPredicted RBP15.79■□□□□ 0.12
LRCH3-206ENST00000438796 FBLN1P23142 703 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 SLFN5Q08AF3 891 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 EVI5LQ96CN4 794 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 USP25Q9UHP3 1055 aa15.79■□□□□ 0.12
LRCH3-206ENST00000438796 CCDC175P0C221 793 aa15.78■□□□□ 0.12
LRCH3-206ENST00000438796 ZNF408Q9H9D4 720 aa15.78■□□□□ 0.12
LRCH3-206ENST00000438796 RBM27Q9P2N5 1060 aaKnown RBP15.78■□□□□ 0.12
LRCH3-206ENST00000438796 UBAP1LF5GYI3 381 aa15.78■□□□□ 0.12
LRCH3-206ENST00000438796 STAT6P42226 847 aa15.78■□□□□ 0.12
LRCH3-206ENST00000438796 LIMCH1Q9UPQ0 1083 aa15.78■□□□□ 0.12
LRCH3-206ENST00000438796 SBNO2Q9Y2G9 1366 aa15.78■□□□□ 0.12
LRCH3-206ENST00000438796 GSTO1P78417 241 aa15.78■□□□□ 0.12
LRCH3-206ENST00000438796 C20orf194Q5TEA3 1177 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms