RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SEPT3Q9UH03 358 aa6.88□□□□□ -1.31
TRAPPC13-204ENST00000438419 ADAMTS2O95450 1211 aa6.87□□□□□ -1.31
TRAPPC13-204ENST00000438419 PROCP04070 461 aa6.87□□□□□ -1.31
TRAPPC13-204ENST00000438419 CD33P20138 364 aa6.87□□□□□ -1.31
TRAPPC13-204ENST00000438419 MX2P20592 715 aa6.87□□□□□ -1.31
TRAPPC13-204ENST00000438419 SRSF11Q05519 484 aaKnown RBP6.87□□□□□ -1.31
TRAPPC13-204ENST00000438419 TYRO3Q06418 890 aa6.87□□□□□ -1.31
TRAPPC13-204ENST00000438419 C11orf91Q3C1V1 193 aa6.87□□□□□ -1.31
TRAPPC13-204ENST00000438419 FAM26DQ5JW98 314 aa6.87□□□□□ -1.31
TRAPPC13-204ENST00000438419 BTLAQ7Z6A9 289 aa6.87□□□□□ -1.31
TRAPPC13-204ENST00000438419 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.87□□□□□ -1.312e-6■■■■■ 149.1
TRAPPC13-204ENST00000438419 IGF1RP08069 1367 aa6.87□□□□□ -1.31
TRAPPC13-204ENST00000438419 TGFBR3LH3BV60 316 aa6.86□□□□□ -1.31
TRAPPC13-204ENST00000438419 TNFRSF10BO14763 440 aa6.86□□□□□ -1.31
TRAPPC13-204ENST00000438419 PTCD1O75127 700 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-204ENST00000438419 PDIA4P13667 645 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-204ENST00000438419 SFSWAPQ12872 951 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-204ENST00000438419 IER5Q5VY09 327 aa6.86□□□□□ -1.31
TRAPPC13-204ENST00000438419 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
TRAPPC13-204ENST00000438419 DCAF5Q96JK2 942 aa6.86□□□□□ -1.31
TRAPPC13-204ENST00000438419 TRAIPQ9BWF2 469 aa6.86□□□□□ -1.31
TRAPPC13-204ENST00000438419 LAMC2Q13753 1193 aa6.85□□□□□ -1.31
TRAPPC13-204ENST00000438419 HIF1AQ16665 826 aa6.85□□□□□ -1.31
TRAPPC13-204ENST00000438419 FAM182BQ5T319 152 aa6.85□□□□□ -1.31
TRAPPC13-204ENST00000438419 CEP63Q96MT8 703 aa6.85□□□□□ -1.31
TRAPPC13-204ENST00000438419 GRNP28799 593 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-204ENST00000438419 KCNQ4P56696 695 aa6.84□□□□□ -1.31
TRAPPC13-204ENST00000438419 ACDQ96AP0 544 aa6.84□□□□□ -1.31
TRAPPC13-204ENST00000438419 IFT43Q96FT9 208 aa6.84□□□□□ -1.31
TRAPPC13-204ENST00000438419 BRD7Q9NPI1 651 aa6.84□□□□□ -1.31
TRAPPC13-204ENST00000438419 MARK1Q9P0L2 795 aa6.84□□□□□ -1.31
TRAPPC13-204ENST00000438419 OPLAHO14841 1288 aa6.84□□□□□ -1.32
TRAPPC13-204ENST00000438419 MICAL2O94851 1124 aa6.84□□□□□ -1.32
TRAPPC13-204ENST00000438419 BMP4P12644 408 aa6.84□□□□□ -1.32
TRAPPC13-204ENST00000438419 INPP5BP32019 993 aa6.84□□□□□ -1.32
TRAPPC13-204ENST00000438419 LYPD4Q6UWN0 246 aa6.84□□□□□ -1.32
TRAPPC13-204ENST00000438419 ETFBKMTQ8IXQ9 262 aa6.84□□□□□ -1.32
TRAPPC13-204ENST00000438419 PHF20L1A8MW92 1017 aa6.83□□□□□ -1.32
TRAPPC13-204ENST00000438419 ITGB2P05107 769 aa6.83□□□□□ -1.32
TRAPPC13-204ENST00000438419 MAP2K3P46734 347 aa6.83□□□□□ -1.32
TRAPPC13-204ENST00000438419 IDH3AP50213 366 aa6.83□□□□□ -1.32
TRAPPC13-204ENST00000438419 SLC30A3Q99726 388 aa6.83□□□□□ -1.32
TRAPPC13-204ENST00000438419 KLF15Q9UIH9 416 aa6.83□□□□□ -1.32
TRAPPC13-204ENST00000438419 ZBTB39O15060 712 aa6.82□□□□□ -1.32
TRAPPC13-204ENST00000438419 BRD1O95696 1058 aa6.82□□□□□ -1.32
TRAPPC13-204ENST00000438419 CELA2BP08218 269 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-204ENST00000438419 MAP3K10Q02779 954 aa6.82□□□□□ -1.32
TRAPPC13-204ENST00000438419 C1orf229Q6ZS94 237 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-204ENST00000438419 TREML1Q86YW5 311 aa6.82□□□□□ -1.32
TRAPPC13-204ENST00000438419 GTF3C2Q8WUA4 911 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-204ENST00000438419 NSFL1CQ9UNZ2 370 aaKnown RBP6.82□□□□□ -1.32
TRAPPC13-204ENST00000438419 KCNH4Q9UQ05 1017 aa6.82□□□□□ -1.32
TRAPPC13-204ENST00000438419 BRD2P25440 801 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-204ENST00000438419 OXCT2Q9BYC2 517 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC13-204ENST00000438419 STIM2Q9P246 746 aa6.81□□□□□ -1.32
TRAPPC13-204ENST00000438419 MTMR7Q9Y216 660 aa6.81□□□□□ -1.32
TRAPPC13-204ENST00000438419 PATL2C9JE40 543 aaKnown RBP6.8□□□□□ -1.32
TRAPPC13-204ENST00000438419 ARAFP10398 606 aa6.8□□□□□ -1.32
TRAPPC13-204ENST00000438419 BAG6P46379 1132 aa6.8□□□□□ -1.32
TRAPPC13-204ENST00000438419 HELQQ8TDG4 1101 aa6.8□□□□□ -1.32
TRAPPC13-204ENST00000438419 USP20Q9Y2K6 914 aa6.8□□□□□ -1.32
TRAPPC13-204ENST00000438419 ARSDP51689 593 aa6.79□□□□□ -1.32
TRAPPC13-204ENST00000438419 PCBP4P57723 403 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-204ENST00000438419 SPEM2Q0P670 501 aa6.79□□□□□ -1.32
TRAPPC13-204ENST00000438419 MTMR3Q13615 1198 aa6.79□□□□□ -1.32
TRAPPC13-204ENST00000438419 ZNF468Q5VIY5 522 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC13-204ENST00000438419 GSX2Q9BZM3 304 aa6.79□□□□□ -1.32
TRAPPC13-204ENST00000438419 GGA1Q9UJY5 639 aa6.79□□□□□ -1.32
TRAPPC13-204ENST00000438419 FURINP09958 794 aa6.78□□□□□ -1.32
TRAPPC13-204ENST00000438419 BCRP11274 1271 aa6.78□□□□□ -1.32
TRAPPC13-204ENST00000438419 KCNA1Q09470 495 aa6.78□□□□□ -1.32
TRAPPC13-204ENST00000438419 RAB44Q7Z6P3 723 aaPredicted RBP6.78□□□□□ -1.32
TRAPPC13-204ENST00000438419 TXNDC2Q86VQ3 553 aa6.78□□□□□ -1.32
TRAPPC13-204ENST00000438419 PRR12Q9ULL5 1215 aa6.78□□□□□ -1.32
TRAPPC13-204ENST00000438419 RTCBQ9Y3I0 505 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-204ENST00000438419 NEURL1BA8MQ27 555 aa6.77□□□□□ -1.33
TRAPPC13-204ENST00000438419 OIP5O43482 229 aa6.77□□□□□ -1.33
TRAPPC13-204ENST00000438419 ARID4AP29374 1257 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC13-204ENST00000438419 SYT9Q86SS6 491 aa6.77□□□□□ -1.33
TRAPPC13-204ENST00000438419 FCHSD1Q86WN1 690 aa6.77□□□□□ -1.33
TRAPPC13-204ENST00000438419 AVENQ9NQS1 362 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC13-204ENST00000438419 ENAMQ9NRM1 1142 aa6.77□□□□□ -1.33
TRAPPC13-204ENST00000438419 GDF2Q9UK05 429 aaPredicted RBP6.77□□□□□ -1.33
TRAPPC13-204ENST00000438419 SHISA8B8ZZ34 492 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 NPR3P17342 541 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 ADH6P28332 368 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 ZAP70P43403 619 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 SERPINB4P48594 390 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 SLCO4C1Q6ZQN7 724 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 PODNQ7Z5L7 613 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 ATCAYQ86WG3 371 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 RGL4Q8IZJ4 473 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 GOLGA6L1Q8N7Z2 621 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 MDFIQ99750 246 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 ANO2Q9NQ90 1003 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 LRRC4BQ9NT99 713 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 KCNMB2Q9Y691 235 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 EPB42P16452 691 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 MPSTP25325 297 aa6.76□□□□□ -1.33
TRAPPC13-204ENST00000438419 ZNF211Q13398 564 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms