RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 TRPM4Q8TD43 1214 aa12.59□□□□□ -0.39
RPE-210ENST00000438204 CUL9Q8IWT3 2517 aa12.59□□□□□ -0.39
RPE-210ENST00000438204 KLRG2A4D1S0 409 aaPredicted RBP12.58□□□□□ -0.4
RPE-210ENST00000438204 A1BGP04217 495 aa12.58□□□□□ -0.4
RPE-210ENST00000438204 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
RPE-210ENST00000438204 PIP4K2AP48426 406 aaPredicted RBP12.58□□□□□ -0.4
RPE-210ENST00000438204 RGMBQ6NW40 437 aa12.58□□□□□ -0.4
RPE-210ENST00000438204 HTTP42858 3142 aa12.57□□□□□ -0.4
RPE-210ENST00000438204 ABCC12Q96J65 1359 aa12.57□□□□□ -0.4
RPE-210ENST00000438204 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
RPE-210ENST00000438204 KIAA0100Q14667 2235 aaKnown RBP12.57□□□□□ -0.4
RPE-210ENST00000438204 SHTN1A0MZ66 631 aa12.57□□□□□ -0.4
RPE-210ENST00000438204 GMPSP49915 693 aaPredicted RBP12.57□□□□□ -0.4
RPE-210ENST00000438204 HIRAP54198 1017 aaPredicted RBP12.57□□□□□ -0.4
RPE-210ENST00000438204 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
RPE-210ENST00000438204 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
RPE-210ENST00000438204 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
RPE-210ENST00000438204 CEP290O15078 2479 aa12.56□□□□□ -0.4
RPE-210ENST00000438204 NPC1L1Q9UHC9 1359 aa12.56□□□□□ -0.4
RPE-210ENST00000438204 RBBP6Q7Z6E9 1792 aaKnown RBP12.56□□□□□ -0.4
RPE-210ENST00000438204 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
RPE-210ENST00000438204 USP48Q86UV5 1035 aa12.56□□□□□ -0.4
RPE-210ENST00000438204 AOC3Q16853 763 aa12.55□□□□□ -0.4
RPE-210ENST00000438204 TTC5Q8N0Z6 440 aa12.55□□□□□ -0.4
RPE-210ENST00000438204 PGAP2Q9UHJ9 254 aa12.55□□□□□ -0.4
RPE-210ENST00000438204 BRCA2P51587 3418 aa12.55□□□□□ -0.4
RPE-210ENST00000438204 CENPFP49454 3210 aa12.54□□□□□ -0.4
RPE-210ENST00000438204 TCERG1O14776 1098 aaKnown RBP12.54□□□□□ -0.4
RPE-210ENST00000438204 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
RPE-210ENST00000438204 ZNF157P51786 506 aaPredicted RBP12.54□□□□□ -0.4
RPE-210ENST00000438204 CDC37L1Q7L3B6 337 aa12.54□□□□□ -0.4
RPE-210ENST00000438204 CSRNP1Q96S65 589 aa12.54□□□□□ -0.4
RPE-210ENST00000438204 SLC10A3P09131 477 aa12.53□□□□□ -0.4
RPE-210ENST00000438204 ALDH1B1P30837 517 aa12.53□□□□□ -0.4
RPE-210ENST00000438204 CXCL9Q07325 125 aa12.53□□□□□ -0.4
RPE-210ENST00000438204 GBA2Q9HCG7 927 aaPredicted RBP12.53□□□□□ -0.4
RPE-210ENST00000438204 HDAC9Q9UKV0 1011 aa12.53□□□□□ -0.4
RPE-210ENST00000438204 NIP7Q9Y221 180 aaKnown RBP eCLIP12.53□□□□□ -0.4
RPE-210ENST00000438204 POTEFA5A3E0 1075 aa12.52□□□□□ -0.41
RPE-210ENST00000438204 ADM5C9JUS6 153 aa12.52□□□□□ -0.41
RPE-210ENST00000438204 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
RPE-210ENST00000438204 ZNF296Q8WUU4 475 aaPredicted RBP12.52□□□□□ -0.41
RPE-210ENST00000438204 COLQQ9Y215 455 aaPredicted RBP12.52□□□□□ -0.41
RPE-210ENST00000438204 RIC1Q4ADV7 1423 aa12.52□□□□□ -0.41
RPE-210ENST00000438204 PKN2Q16513 984 aaKnown RBP12.51□□□□□ -0.41
RPE-210ENST00000438204 CDCA8Q53HL2 280 aa12.51□□□□□ -0.41
RPE-210ENST00000438204 TPTE2Q6XPS3 522 aa12.51□□□□□ -0.41
RPE-210ENST00000438204 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
RPE-210ENST00000438204 CCDC102AQ96A19 550 aa12.51□□□□□ -0.41
RPE-210ENST00000438204 NUP98P52948 1817 aa12.51□□□□□ -0.41
RPE-210ENST00000438204 TBC1D8O95759 1140 aa12.5□□□□□ -0.41
RPE-210ENST00000438204 HMOX1P09601 288 aa12.5□□□□□ -0.41
RPE-210ENST00000438204 IL13P35225 146 aa12.5□□□□□ -0.41
RPE-210ENST00000438204 MTHFSDQ2M296 383 aaKnown RBP12.5□□□□□ -0.41
RPE-210ENST00000438204 CRY2Q49AN0 593 aa12.5□□□□□ -0.41
RPE-210ENST00000438204 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
RPE-210ENST00000438204 ZNF790Q6PG37 636 aa12.5□□□□□ -0.41
RPE-210ENST00000438204 FBXO46Q6PJ61 603 aaPredicted RBP12.5□□□□□ -0.41
RPE-210ENST00000438204 NUTM1Q86Y26 1132 aa12.5□□□□□ -0.41
RPE-210ENST00000438204 BCL2L13Q9BXK5 485 aa12.5□□□□□ -0.41
RPE-210ENST00000438204 ZNF652Q9Y2D9 606 aa12.5□□□□□ -0.41
RPE-210ENST00000438204 COL6A3P12111 3177 aa12.5□□□□□ -0.41
RPE-210ENST00000438204 CDHR2Q9BYE9 1310 aa12.49□□□□□ -0.41
RPE-210ENST00000438204 PRAMEF22A3QJZ6 481 aa12.49□□□□□ -0.41
RPE-210ENST00000438204 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
RPE-210ENST00000438204 RAD17O75943 681 aa12.49□□□□□ -0.41
RPE-210ENST00000438204 KRT26Q7Z3Y9 468 aa12.49□□□□□ -0.41
RPE-210ENST00000438204 RASAL3Q86YV0 1011 aa12.49□□□□□ -0.41
RPE-210ENST00000438204 C2orf69Q8N8R5 385 aa12.49□□□□□ -0.41
RPE-210ENST00000438204 SLC17A8Q8NDX2 589 aa12.49□□□□□ -0.41
RPE-210ENST00000438204 A0A0C4DFX4 3053 aa12.49□□□□□ -0.41
RPE-210ENST00000438204 KCNQ3O43525 872 aa12.48□□□□□ -0.41
RPE-210ENST00000438204 EGFRP00533 1210 aa12.48□□□□□ -0.41
RPE-210ENST00000438204 CLEC4GQ6UXB4 293 aa12.48□□□□□ -0.41
RPE-210ENST00000438204 MICALL2Q8IY33 904 aa12.48□□□□□ -0.41
RPE-210ENST00000438204 RPGRQ92834 1020 aaKnown RBP12.48□□□□□ -0.41
RPE-210ENST00000438204 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
RPE-210ENST00000438204 ZNRF3Q9ULT6 936 aa12.48□□□□□ -0.41
RPE-210ENST00000438204 LAMB2P55268 1798 aa12.48□□□□□ -0.41
RPE-210ENST00000438204 GTF2E1P29083 439 aaPredicted RBP12.47□□□□□ -0.41
RPE-210ENST00000438204 HLFQ16534 295 aa12.47□□□□□ -0.41
RPE-210ENST00000438204 SAMD7Q7Z3H4 446 aa12.47□□□□□ -0.41
RPE-210ENST00000438204 CNOT7Q9UIV1 285 aaKnown RBP12.47□□□□□ -0.41
RPE-210ENST00000438204 TBC1D10BQ4KMP7 808 aaPredicted RBP12.46□□□□□ -0.41
RPE-210ENST00000438204 C3orf67Q6ZVT6 689 aa12.46□□□□□ -0.41
RPE-210ENST00000438204 FMNL2Q96PY5 1086 aa12.46□□□□□ -0.41
RPE-210ENST00000438204 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.41
RPE-210ENST00000438204 USP16Q9Y5T5 823 aa12.46□□□□□ -0.41
RPE-210ENST00000438204 DUOX1Q9NRD9 1551 aa12.46□□□□□ -0.42
RPE-210ENST00000438204 TAF1P21675 1872 aa12.46□□□□□ -0.42
RPE-210ENST00000438204 LAMB4A4D0S4 1761 aa12.46□□□□□ -0.42
RPE-210ENST00000438204 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
RPE-210ENST00000438204 TEFQ10587 303 aa12.45□□□□□ -0.42
RPE-210ENST00000438204 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
RPE-210ENST00000438204 ASTN2O75129 1339 aaPredicted RBP12.44□□□□□ -0.42
RPE-210ENST00000438204 KDM3BQ7LBC6 1761 aa12.44□□□□□ -0.42
RPE-210ENST00000438204 H7C1D1 291 aa12.44□□□□□ -0.42
RPE-210ENST00000438204 GPR25O00155 361 aa12.44□□□□□ -0.42
RPE-210ENST00000438204 HOXA10P31260 410 aaPredicted RBP12.44□□□□□ -0.42
RPE-210ENST00000438204 RANBP2P49792 3224 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms