RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 EPHA10Q5JZY3 1008 aa20.56■□□□□ 0.88
GSE1-206ENST00000438180 CCDC87Q9NVE4 849 aa20.56■□□□□ 0.88
GSE1-206ENST00000438180 IFIT2P09913 472 aaKnown RBP20.55■□□□□ 0.88
GSE1-206ENST00000438180 ARXQ96QS3 562 aa20.55■□□□□ 0.88
GSE1-206ENST00000438180 AFF2P51816 1311 aa20.54■□□□□ 0.88
GSE1-206ENST00000438180 NUTM1Q86Y26 1132 aa20.54■□□□□ 0.88
GSE1-206ENST00000438180 GJD4Q96KN9 370 aaPredicted RBP20.54■□□□□ 0.88
GSE1-206ENST00000438180 GLRX3O76003 335 aaKnown RBP20.53■□□□□ 0.88
GSE1-206ENST00000438180 PCCAP05165 728 aaPredicted RBP20.53■□□□□ 0.88
GSE1-206ENST00000438180 TRPC5Q9UL62 973 aaPredicted RBP20.53■□□□□ 0.88
GSE1-206ENST00000438180 TRIM6-TRIM34B2RNG4 842 aa20.53■□□□□ 0.88
GSE1-206ENST00000438180 REC8O95072 547 aa20.53■□□□□ 0.88
GSE1-206ENST00000438180 FOXO4P98177 505 aa20.53■□□□□ 0.88
GSE1-206ENST00000438180 LMBR1LQ6UX01 489 aa20.53■□□□□ 0.88
GSE1-206ENST00000438180 DZIP3Q86Y13 1208 aaKnown RBP20.53■□□□□ 0.88
GSE1-206ENST00000438180 NHSQ6T4R5 1651 aa20.52■□□□□ 0.88
GSE1-206ENST00000438180 AK9Q5TCS8 1911 aa20.52■□□□□ 0.88
GSE1-206ENST00000438180 ATRNO75882 1429 aa20.52■□□□□ 0.88
GSE1-206ENST00000438180 CRKLP46109 303 aaKnown RBP20.52■□□□□ 0.88
GSE1-206ENST00000438180 RFX5P48382 616 aaPredicted RBP20.52■□□□□ 0.88
GSE1-206ENST00000438180 ZBTB38Q8NAP3 1195 aaPredicted RBP20.52■□□□□ 0.88
GSE1-206ENST00000438180 JARID2Q92833 1246 aaPredicted RBP20.52■□□□□ 0.88
GSE1-206ENST00000438180 NUP98P52948 1817 aa20.52■□□□□ 0.87
GSE1-206ENST00000438180 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
GSE1-206ENST00000438180 EIF5P55010 431 aaKnown RBP20.51■□□□□ 0.87
GSE1-206ENST00000438180 PTPN12Q05209 780 aaKnown RBP20.51■□□□□ 0.87
GSE1-206ENST00000438180 TSHZ3Q63HK5 1081 aa20.51■□□□□ 0.87
GSE1-206ENST00000438180 AACSQ86V21 672 aa20.51■□□□□ 0.87
GSE1-206ENST00000438180 SIL1Q9H173 461 aa20.51■□□□□ 0.87
GSE1-206ENST00000438180 ECHDC1Q9NTX5 307 aa20.51■□□□□ 0.87
GSE1-206ENST00000438180 SASH1O94885 1247 aa20.5■□□□□ 0.87
GSE1-206ENST00000438180 INTS5Q6P9B9 1019 aaKnown RBP20.5■□□□□ 0.87
GSE1-206ENST00000438180 CNTROBQ8N137 903 aa20.5■□□□□ 0.87
GSE1-206ENST00000438180 PI4K2BQ8TCG2 481 aa20.5■□□□□ 0.87
GSE1-206ENST00000438180 RILPL2Q969X0 211 aa20.5■□□□□ 0.87
GSE1-206ENST00000438180 PLA2G12BQ9BX93 195 aa20.5■□□□□ 0.87
GSE1-206ENST00000438180 CHMP3Q9Y3E7 222 aa20.5■□□□□ 0.87
GSE1-206ENST00000438180 CDHR2Q9BYE9 1310 aa20.5■□□□□ 0.87
GSE1-206ENST00000438180 KCNQ2O43526 872 aa20.5■□□□□ 0.87
GSE1-206ENST00000438180 NLRP10Q86W26 655 aa20.48■□□□□ 0.87
GSE1-206ENST00000438180 BTAF1O14981 1849 aa20.47■□□□□ 0.87
GSE1-206ENST00000438180 ONECUT3O60422 494 aaPredicted RBP20.47■□□□□ 0.87
GSE1-206ENST00000438180 ITPK1Q13572 414 aa20.47■□□□□ 0.87
GSE1-206ENST00000438180 HLFQ16534 295 aa20.47■□□□□ 0.87
GSE1-206ENST00000438180 RTL5Q5HYW3 569 aaPredicted RBP20.47■□□□□ 0.87
GSE1-206ENST00000438180 KLHDC4Q8TBB5 520 aa20.47■□□□□ 0.87
GSE1-206ENST00000438180 FBXO3Q9UK99 471 aa20.47■□□□□ 0.87
GSE1-206ENST00000438180 TBC1D2BQ9UPU7 963 aa20.46■□□□□ 0.87
GSE1-206ENST00000438180 CIAO1O76071 339 aa20.45■□□□□ 0.86
GSE1-206ENST00000438180 CHMLP26374 656 aa20.45■□□□□ 0.86
GSE1-206ENST00000438180 IL15P40933 162 aaPredicted RBP20.45■□□□□ 0.86
GSE1-206ENST00000438180 CCDC57Q2TAC2 916 aa20.45■□□□□ 0.86
GSE1-206ENST00000438180 EAF2Q96CJ1 260 aaPredicted RBP20.45■□□□□ 0.86
GSE1-206ENST00000438180 ZNF652Q9Y2D9 606 aa20.45■□□□□ 0.86
GSE1-206ENST00000438180 MYH3P11055 1940 aa20.45■□□□□ 0.86
GSE1-206ENST00000438180 MYH14Q7Z406 1995 aaKnown RBP20.45■□□□□ 0.86
GSE1-206ENST00000438180 GPTP24298 496 aa20.44■□□□□ 0.86
GSE1-206ENST00000438180 ZNF34Q8IZ26 560 aa20.44■□□□□ 0.86
GSE1-206ENST00000438180 AK7Q96M32 723 aa20.44■□□□□ 0.86
GSE1-206ENST00000438180 ESYT1Q9BSJ8 1104 aa20.44■□□□□ 0.86
GSE1-206ENST00000438180 CNTNAP4Q9C0A0 1308 aa20.44■□□□□ 0.86
GSE1-206ENST00000438180 RGL2O15211 777 aa20.44■□□□□ 0.86
GSE1-206ENST00000438180 EPB41L2O43491 1005 aaKnown RBP20.44■□□□□ 0.86
GSE1-206ENST00000438180 HSP90B1P14625 803 aaKnown RBP20.44■□□□□ 0.86
GSE1-206ENST00000438180 PARP10Q53GL7 1025 aa20.44■□□□□ 0.86
GSE1-206ENST00000438180 FAM89AQ96GI7 184 aa20.44■□□□□ 0.86
GSE1-206ENST00000438180 USP26Q9BXU7 913 aa20.44■□□□□ 0.86
GSE1-206ENST00000438180 GPR108Q9NPR9 543 aa20.44■□□□□ 0.86
GSE1-206ENST00000438180 TNNI3KQ59H18 835 aa20.43■□□□□ 0.86
GSE1-206ENST00000438180 TRMT112Q9UI30 125 aaKnown RBP20.43■□□□□ 0.86
GSE1-206ENST00000438180 FPGT-TNNI3KV9GXZ4 949 aa20.43■□□□□ 0.86
GSE1-206ENST00000438180 EYA2O00167 538 aa20.42■□□□□ 0.86
GSE1-206ENST00000438180 CSF1RP07333 972 aa20.42■□□□□ 0.86
GSE1-206ENST00000438180 TFCP2Q12800 502 aa20.42■□□□□ 0.86
GSE1-206ENST00000438180 EVI5LQ96CN4 794 aa20.42■□□□□ 0.86
GSE1-206ENST00000438180 BCORQ6W2J9 1755 aa20.42■□□□□ 0.86
GSE1-206ENST00000438180 SBF2Q86WG5 1849 aa20.42■□□□□ 0.86
GSE1-206ENST00000438180 RC3H1Q5TC82 1133 aaKnown RBP20.41■□□□□ 0.86
GSE1-206ENST00000438180 HSCBQ8IWL3 235 aa20.41■□□□□ 0.86
GSE1-206ENST00000438180 HIP1O00291 1037 aa20.41■□□□□ 0.86
GSE1-206ENST00000438180 CAMTA2O94983 1202 aa20.41■□□□□ 0.86
GSE1-206ENST00000438180 MCCP23508 829 aa20.41■□□□□ 0.86
GSE1-206ENST00000438180 IFIT5Q13325 482 aaKnown RBP20.41■□□□□ 0.86
GSE1-206ENST00000438180 TAF7LQ5H9L4 462 aa20.41■□□□□ 0.86
GSE1-206ENST00000438180 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
GSE1-206ENST00000438180 CCDC8Q9H0W5 538 aaPredicted RBP20.41■□□□□ 0.86
GSE1-206ENST00000438180 IRS4O14654 1257 aaPredicted RBP20.4■□□□□ 0.86
GSE1-206ENST00000438180 PDE8AO60658 829 aa20.4■□□□□ 0.86
GSE1-206ENST00000438180 CTSWP56202 376 aa20.4■□□□□ 0.86
GSE1-206ENST00000438180 CLEC4GQ6UXB4 293 aa20.4■□□□□ 0.86
GSE1-206ENST00000438180 LINC00116Q8NCU8 138 aa20.4■□□□□ 0.86
GSE1-206ENST00000438180 RUFY2Q8WXA3 655 aa20.4■□□□□ 0.86
GSE1-206ENST00000438180 SNX21Q969T3 373 aa20.4■□□□□ 0.86
GSE1-206ENST00000438180 QTRT2Q9H974 415 aaKnown RBP20.4■□□□□ 0.86
GSE1-206ENST00000438180 SLC4A3P48751 1232 aa20.39■□□□□ 0.86
GSE1-206ENST00000438180 TBC1D2Q9BYX2 928 aa20.39■□□□□ 0.86
GSE1-206ENST00000438180 LY75O60449 1722 aa20.39■□□□□ 0.85
GSE1-206ENST00000438180 RABEP1Q15276 862 aa20.39■□□□□ 0.85
GSE1-206ENST00000438180 ATG9AQ7Z3C6 839 aa20.39■□□□□ 0.85
GSE1-206ENST00000438180 UBN2Q6ZU65 1347 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms