RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 ZCRB1Q8TBF4 217 aaKnown RBP20.57■□□□□ 0.88
CTSD-204ENST00000433655 CHAMP1Q96JM3 812 aa20.57■□□□□ 0.88
CTSD-204ENST00000433655 COPRSQ9NQ92 184 aa20.56■□□□□ 0.88
CTSD-204ENST00000433655 SLAIN2Q9P270 581 aa20.56■□□□□ 0.88
CTSD-204ENST00000433655 NHSL1Q5SYE7 1610 aa20.56■□□□□ 0.88
CTSD-204ENST00000433655 BRD1O95696 1058 aa20.56■□□□□ 0.88
CTSD-204ENST00000433655 PLBD2Q8NHP8 589 aa20.56■□□□□ 0.88
CTSD-204ENST00000433655 DDX49Q9Y6V7 483 aaKnown RBP20.56■□□□□ 0.88
CTSD-204ENST00000433655 ZNF335Q9H4Z2 1342 aaPredicted RBP20.56■□□□□ 0.88
CTSD-204ENST00000433655 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
CTSD-204ENST00000433655 PTCD1O75127 700 aaKnown RBP20.55■□□□□ 0.88
CTSD-204ENST00000433655 KIAA1211Q6ZU35 1233 aa20.55■□□□□ 0.88
CTSD-204ENST00000433655 RUFY2Q8WXA3 655 aa20.55■□□□□ 0.88
CTSD-204ENST00000433655 ERBB4Q15303 1308 aa20.55■□□□□ 0.88
CTSD-204ENST00000433655 PTPN12Q05209 780 aaKnown RBP20.54■□□□□ 0.88
CTSD-204ENST00000433655 NKX1-1Q15270 411 aaPredicted RBP20.54■□□□□ 0.88
CTSD-204ENST00000433655 UBE3BQ7Z3V4 1068 aa20.54■□□□□ 0.88
CTSD-204ENST00000433655 KCNB2Q92953 911 aa20.54■□□□□ 0.88
CTSD-204ENST00000433655 TNS2Q63HR2 1409 aa20.54■□□□□ 0.88
CTSD-204ENST00000433655 ERVV-2B6SEH9 535 aa20.53■□□□□ 0.88
CTSD-204ENST00000433655 SNRKQ9NRH2 765 aa20.53■□□□□ 0.88
CTSD-204ENST00000433655 FAM227BQ96M60 508 aa20.53■□□□□ 0.88
CTSD-204ENST00000433655 AK2P54819 239 aa20.52■□□□□ 0.88
CTSD-204ENST00000433655 NMIQ13287 307 aaPredicted RBP20.52■□□□□ 0.88
CTSD-204ENST00000433655 CARD10Q9BWT7 1032 aa20.52■□□□□ 0.88
CTSD-204ENST00000433655 CCDC171Q6TFL3 1326 aa20.51■□□□□ 0.87
CTSD-204ENST00000433655 A0A087WZG4 1122 aa20.51■□□□□ 0.87
CTSD-204ENST00000433655 IL2RBP14784 551 aa20.51■□□□□ 0.87
CTSD-204ENST00000433655 FOXD4L5Q5VV16 416 aaPredicted RBP20.51■□□□□ 0.87
CTSD-204ENST00000433655 RUFY3Q7L099 469 aa20.51■□□□□ 0.87
CTSD-204ENST00000433655 FOXD4L4Q8WXT5 416 aaPredicted RBP20.51■□□□□ 0.87
CTSD-204ENST00000433655 BOLA2Q9H3K6 86 aa20.51■□□□□ 0.87
CTSD-204ENST00000433655 CPA1P15085 419 aa20.51■□□□□ 0.87
CTSD-204ENST00000433655 NECTIN1Q15223 517 aa20.51■□□□□ 0.87
CTSD-204ENST00000433655 TTLL7Q6ZT98 887 aa20.51■□□□□ 0.87
CTSD-204ENST00000433655 GPT2Q8TD30 523 aa20.51■□□□□ 0.87
CTSD-204ENST00000433655 RPAP1Q9BWH6 1393 aaPredicted RBP20.5■□□□□ 0.87
CTSD-204ENST00000433655 PRPF40AO75400 957 aaKnown RBP20.5■□□□□ 0.87
CTSD-204ENST00000433655 ADCK5Q3MIX3 580 aa20.5■□□□□ 0.87
CTSD-204ENST00000433655 A0A0D9SFI3 127 aa20.49■□□□□ 0.87
CTSD-204ENST00000433655 TNNI3KQ59H18 835 aa20.49■□□□□ 0.87
CTSD-204ENST00000433655 PRPF40BQ6NWY9 871 aaKnown RBP20.49■□□□□ 0.87
CTSD-204ENST00000433655 DBNLQ9UJU6 430 aaKnown RBP20.49■□□□□ 0.87
CTSD-204ENST00000433655 FPGT-TNNI3KV9GXZ4 949 aa20.49■□□□□ 0.87
CTSD-204ENST00000433655 MED23Q9ULK4 1368 aa20.49■□□□□ 0.87
CTSD-204ENST00000433655 HIP1O00291 1037 aa20.49■□□□□ 0.87
CTSD-204ENST00000433655 CASTP20810 708 aaKnown RBP20.49■□□□□ 0.87
CTSD-204ENST00000433655 FOXO4P98177 505 aa20.49■□□□□ 0.87
CTSD-204ENST00000433655 TFCP2Q12800 502 aa20.49■□□□□ 0.87
CTSD-204ENST00000433655 FAM43AQ8N2R8 423 aa20.49■□□□□ 0.87
CTSD-204ENST00000433655 JCADQ9P266 1359 aa20.49■□□□□ 0.87
CTSD-204ENST00000433655 H7C1W4 665 aa20.48■□□□□ 0.87
CTSD-204ENST00000433655 A1BGP04217 495 aa20.48■□□□□ 0.87
CTSD-204ENST00000433655 MAP4K1Q92918 833 aa20.48■□□□□ 0.87
CTSD-204ENST00000433655 LARP6Q9BRS8 491 aaKnown RBP20.48■□□□□ 0.87
CTSD-204ENST00000433655 TM6SF1Q9BZW5 370 aa20.48■□□□□ 0.87
CTSD-204ENST00000433655 LIMCH1Q9UPQ0 1083 aa20.48■□□□□ 0.87
CTSD-204ENST00000433655 RBM8AQ9Y5S9 174 aaKnown RBP20.48■□□□□ 0.87
CTSD-204ENST00000433655 LARGE1O95461 756 aa20.47■□□□□ 0.87
CTSD-204ENST00000433655 ZNF445P59923 1031 aa20.47■□□□□ 0.87
CTSD-204ENST00000433655 CAVIN1Q6NZI2 390 aaKnown RBP20.47■□□□□ 0.87
CTSD-204ENST00000433655 EDC3Q96F86 508 aaKnown RBP20.47■□□□□ 0.87
CTSD-204ENST00000433655 FSD1Q9BTV5 496 aa20.47■□□□□ 0.87
CTSD-204ENST00000433655 ZSWIM6Q9HCJ5 1215 aa20.47■□□□□ 0.87
CTSD-204ENST00000433655 ATP5JP18859 108 aa20.46■□□□□ 0.87
CTSD-204ENST00000433655 DDX54Q8TDD1 881 aaKnown RBP20.46■□□□□ 0.87
CTSD-204ENST00000433655 JAKMIP1Q96N16 626 aaKnown RBP20.46■□□□□ 0.87
CTSD-204ENST00000433655 STRN4Q9NRL3 753 aa20.46■□□□□ 0.87
CTSD-204ENST00000433655 ZSCAN23Q3MJ62 389 aa20.46■□□□□ 0.87
CTSD-204ENST00000433655 CREB3L3Q68CJ9 461 aa20.46■□□□□ 0.87
CTSD-204ENST00000433655 LMBR1LQ6UX01 489 aa20.46■□□□□ 0.87
CTSD-204ENST00000433655 NSFL1CQ9UNZ2 370 aaKnown RBP20.46■□□□□ 0.87
CTSD-204ENST00000433655 COL9A3Q14050 684 aaPredicted RBP20.44■□□□□ 0.86
CTSD-204ENST00000433655 VPS53Q5VIR6 699 aa20.44■□□□□ 0.86
CTSD-204ENST00000433655 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.44■□□□□ 0.86
CTSD-204ENST00000433655 NCLP19338 710 aaKnown RBP20.44■□□□□ 0.86
CTSD-204ENST00000433655 ZNF589Q86UQ0 364 aaPredicted RBP20.44■□□□□ 0.86
CTSD-204ENST00000433655 DBNDD2Q9BQY9 259 aa20.44■□□□□ 0.86
CTSD-204ENST00000433655 CWC25Q9NXE8 425 aaPredicted RBP20.44■□□□□ 0.86
CTSD-204ENST00000433655 RBM27Q9P2N5 1060 aaKnown RBP20.44■□□□□ 0.86
CTSD-204ENST00000433655 SLC27A2O14975 620 aa20.43■□□□□ 0.86
CTSD-204ENST00000433655 ST3GAL1Q11201 340 aa20.43■□□□□ 0.86
CTSD-204ENST00000433655 PDRG1Q9NUG6 133 aa20.43■□□□□ 0.86
CTSD-204ENST00000433655 TCHHQ07283 1943 aa20.43■□□□□ 0.86
CTSD-204ENST00000433655 ITGB4P16144 1822 aa20.43■□□□□ 0.86
CTSD-204ENST00000433655 ATG9AQ7Z3C6 839 aa20.43■□□□□ 0.86
CTSD-204ENST00000433655 ZBTB3Q9H5J0 574 aa20.43■□□□□ 0.86
CTSD-204ENST00000433655 RRAGDQ9NQL2 400 aaPredicted RBP20.43■□□□□ 0.86
CTSD-204ENST00000433655 WDR33Q9C0J8 1336 aaKnown RBP20.42■□□□□ 0.86
CTSD-204ENST00000433655 CYP46A1Q9Y6A2 500 aa20.42■□□□□ 0.86
CTSD-204ENST00000433655 TAF6LQ9Y6J9 622 aa20.42■□□□□ 0.86
CTSD-204ENST00000433655 NDUFB9Q9Y6M9 179 aa20.42■□□□□ 0.86
CTSD-204ENST00000433655 RFX7Q2KHR2 1363 aa20.42■□□□□ 0.86
CTSD-204ENST00000433655 TMEM63CQ9P1W3 806 aa20.41■□□□□ 0.86
CTSD-204ENST00000433655 ZNF609O15014 1411 aa20.4■□□□□ 0.86
CTSD-204ENST00000433655 ZKSCAN1P17029 563 aaPredicted RBP20.4■□□□□ 0.86
CTSD-204ENST00000433655 EVA1CP58658 441 aa20.4■□□□□ 0.86
CTSD-204ENST00000433655 CCDC191Q8NCU4 936 aa20.4■□□□□ 0.86
CTSD-204ENST00000433655 HAUS7Q99871 368 aa20.4■□□□□ 0.86
CTSD-204ENST00000433655 TAF5LO75529 589 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms