RNA–Protein interactions for RNA: ENST00000430589.1

AC055876.1-201, humanhuman

TSL 2 BASIC

Gene AC055876.1, Length 895 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.1-201ENST00000430589 ABCC12Q96J65 1359 aa30.71■■■□□ 2.51
AC055876.1-201ENST00000430589 RBM17Q96I25 401 aaKnown RBP30.71■■■□□ 2.51
AC055876.1-201ENST00000430589 PLEKHF1Q96S99 279 aa30.71■■■□□ 2.51
AC055876.1-201ENST00000430589 THUMPD2Q9BTF0 503 aaKnown RBP30.71■■■□□ 2.51
AC055876.1-201ENST00000430589 GJA3Q9Y6H8 435 aa30.71■■■□□ 2.51
AC055876.1-201ENST00000430589 CNTROBQ8N137 903 aa30.7■■■□□ 2.51
AC055876.1-201ENST00000430589 TMX4Q9H1E5 349 aaPredicted RBP30.7■■■□□ 2.51
AC055876.1-201ENST00000430589 LAMB4A4D0S4 1761 aa30.69■■■□□ 2.5
AC055876.1-201ENST00000430589 LMOD1P29536 600 aaPredicted RBP30.69■■■□□ 2.5
AC055876.1-201ENST00000430589 HOXA10P31260 410 aaPredicted RBP30.69■■■□□ 2.5
AC055876.1-201ENST00000430589 SUSD4Q5VX71 490 aa30.69■■■□□ 2.5
AC055876.1-201ENST00000430589 VEGFBP49765 207 aa30.68■■■□□ 2.5
AC055876.1-201ENST00000430589 MAP1SQ66K74 1059 aaPredicted RBP30.68■■■□□ 2.5
AC055876.1-201ENST00000430589 PPP1R42Q7Z4L9 355 aa30.68■■■□□ 2.5
AC055876.1-201ENST00000430589 LARGE2Q8N3Y3 721 aa30.68■■■□□ 2.5
AC055876.1-201ENST00000430589 TCERG1O14776 1098 aaKnown RBP30.67■■■□□ 2.5
AC055876.1-201ENST00000430589 FOXN1O15353 648 aa30.66■■■□□ 2.5
AC055876.1-201ENST00000430589 GIGYF2Q6Y7W6 1299 aaKnown RBP30.66■■■□□ 2.5
AC055876.1-201ENST00000430589 CRAMP1Q96RY5 1269 aa30.66■■■□□ 2.5
AC055876.1-201ENST00000430589 TSPYL4Q9UJ04 414 aa30.66■■■□□ 2.5
AC055876.1-201ENST00000430589 ERBB4Q15303 1308 aa30.66■■■□□ 2.5
AC055876.1-201ENST00000430589 UBN2Q6ZU65 1347 aa30.66■■■□□ 2.5
AC055876.1-201ENST00000430589 NUP98P52948 1817 aa30.66■■■□□ 2.5
AC055876.1-201ENST00000430589 IBTKQ9P2D0 1353 aaPredicted RBP30.66■■■□□ 2.5
AC055876.1-201ENST00000430589 PPEF1O14829 653 aaPredicted RBP30.65■■■□□ 2.5
AC055876.1-201ENST00000430589 ZNF34Q8IZ26 560 aa30.65■■■□□ 2.5
AC055876.1-201ENST00000430589 CTCFP49711 727 aaPredicted RBP30.64■■■□□ 2.5
AC055876.1-201ENST00000430589 DEFB115Q30KQ5 88 aa30.64■■■□□ 2.5
AC055876.1-201ENST00000430589 PARP10Q53GL7 1025 aa30.64■■■□□ 2.5
AC055876.1-201ENST00000430589 NLRP3Q96P20 1036 aa30.64■■■□□ 2.5
AC055876.1-201ENST00000430589 DLG5Q8TDM6 1919 aa30.64■■■□□ 2.5
AC055876.1-201ENST00000430589 KDM3BQ7LBC6 1761 aa30.63■■■□□ 2.49
AC055876.1-201ENST00000430589 EIF2S2P20042 333 aaKnown RBP30.62■■■□□ 2.49
AC055876.1-201ENST00000430589 PRDM10Q9NQV6 1147 aa30.62■■■□□ 2.49
AC055876.1-201ENST00000430589 ABT1Q9ULW3 272 aaKnown RBP30.62■■■□□ 2.49
AC055876.1-201ENST00000430589 RIC1Q4ADV7 1423 aa30.62■■■□□ 2.49
AC055876.1-201ENST00000430589 NTSR2O95665 410 aa30.61■■■□□ 2.49
AC055876.1-201ENST00000430589 NIM1KQ8IY84 436 aa30.61■■■□□ 2.49
AC055876.1-201ENST00000430589 SNED1Q8TER0 1413 aa30.6■■■□□ 2.49
AC055876.1-201ENST00000430589 UTP14AQ9BVJ6 771 aaKnown RBP30.6■■■□□ 2.49
AC055876.1-201ENST00000430589 RASSF10A6NK89 507 aa30.58■■■□□ 2.49
AC055876.1-201ENST00000430589 PPIP5K2O43314 1243 aa30.58■■■□□ 2.49
AC055876.1-201ENST00000430589 RIPK4P57078 832 aa30.58■■■□□ 2.49
AC055876.1-201ENST00000430589 EPS15P42566 896 aa30.57■■■□□ 2.48
AC055876.1-201ENST00000430589 DDX21Q9NR30 783 aaKnown RBP eCLIP30.57■■■□□ 2.48
AC055876.1-201ENST00000430589 WBP1LQ9NX94 342 aa30.57■■■□□ 2.48
AC055876.1-201ENST00000430589 C3orf67Q6ZVT6 689 aa30.56■■■□□ 2.48
AC055876.1-201ENST00000430589 SCNN1DP51172 638 aa30.55■■■□□ 2.48
AC055876.1-201ENST00000430589 USP50Q70EL3 339 aaPredicted RBP30.55■■■□□ 2.48
AC055876.1-201ENST00000430589 SUPT20HQ8NEM7 779 aa30.55■■■□□ 2.48
AC055876.1-201ENST00000430589 VPS33BQ9H267 617 aa30.55■■■□□ 2.48
AC055876.1-201ENST00000430589 ATP6V0A2Q9Y487 856 aa30.55■■■□□ 2.48
AC055876.1-201ENST00000430589 ADAMTSL1Q8N6G6 1762 aa30.55■■■□□ 2.48
AC055876.1-201ENST00000430589 WDR33Q9C0J8 1336 aaKnown RBP30.54■■■□□ 2.48
AC055876.1-201ENST00000430589 MAP2K1Q02750 393 aaPredicted RBP30.54■■■□□ 2.48
AC055876.1-201ENST00000430589 LMOD3Q0VAK6 560 aa30.54■■■□□ 2.48
AC055876.1-201ENST00000430589 SLC10A5Q5PT55 438 aa30.54■■■□□ 2.48
AC055876.1-201ENST00000430589 BABAM1Q9NWV8 329 aa30.54■■■□□ 2.48
AC055876.1-201ENST00000430589 AOC3Q16853 763 aa30.53■■■□□ 2.48
AC055876.1-201ENST00000430589 HSP90AB3PQ58FF7 597 aa30.53■■■□□ 2.48
AC055876.1-201ENST00000430589 LBX1P52954 281 aa30.52■■■□□ 2.48
AC055876.1-201ENST00000430589 PDIA6Q15084 440 aa30.52■■■□□ 2.48
AC055876.1-201ENST00000430589 PAXIP1Q6ZW49 1069 aaPredicted RBP30.52■■■□□ 2.48
AC055876.1-201ENST00000430589 BBOX1O75936 387 aa30.51■■■□□ 2.47
AC055876.1-201ENST00000430589 ANXA1P04083 346 aa30.51■■■□□ 2.47
AC055876.1-201ENST00000430589 AIMP1Q12904 312 aaKnown RBP30.51■■■□□ 2.47
AC055876.1-201ENST00000430589 COL4A5P29400 1685 aa30.51■■■□□ 2.47
AC055876.1-201ENST00000430589 LRP10Q7Z4F1 713 aa30.5■■■□□ 2.47
AC055876.1-201ENST00000430589 NECTIN2Q92692 538 aa30.5■■■□□ 2.47
AC055876.1-201ENST00000430589 ABCC4O15439 1325 aa30.49■■■□□ 2.47
AC055876.1-201ENST00000430589 ECE1P42892 770 aa30.49■■■□□ 2.47
AC055876.1-201ENST00000430589 PROSER3Q2NL68 480 aa30.49■■■□□ 2.47
AC055876.1-201ENST00000430589 DPP8Q6V1X1 898 aaPredicted RBP30.49■■■□□ 2.47
AC055876.1-201ENST00000430589 COPS6Q7L5N1 327 aa30.49■■■□□ 2.47
AC055876.1-201ENST00000430589 SLC51AQ86UW1 340 aa30.49■■■□□ 2.47
AC055876.1-201ENST00000430589 ADARB2Q9NS39 739 aaKnown RBP30.49■■■□□ 2.47
AC055876.1-201ENST00000430589 ZNRF3Q9ULT6 936 aa30.49■■■□□ 2.47
AC055876.1-201ENST00000430589 TMPOP42166 694 aaKnown RBP30.48■■■□□ 2.47
AC055876.1-201ENST00000430589 DDX46Q7L014 1031 aaKnown RBP30.47■■■□□ 2.47
AC055876.1-201ENST00000430589 SP8Q8IXZ3 490 aa30.47■■■□□ 2.47
AC055876.1-201ENST00000430589 MPNDQ8N594 471 aa30.47■■■□□ 2.47
AC055876.1-201ENST00000430589 XAGE3Q8WTP9 111 aa30.47■■■□□ 2.47
AC055876.1-201ENST00000430589 BEGAINQ9BUH8 593 aa30.47■■■□□ 2.47
AC055876.1-201ENST00000430589 GPRC5DQ9NZD1 345 aa30.47■■■□□ 2.47
AC055876.1-201ENST00000430589 TRMT112Q9UI30 125 aaKnown RBP30.47■■■□□ 2.47
AC055876.1-201ENST00000430589 HCLS1P14317 486 aaPredicted RBP30.46■■■□□ 2.47
AC055876.1-201ENST00000430589 GRM1Q13255 1194 aa30.46■■■□□ 2.47
AC055876.1-201ENST00000430589 RALBP1Q15311 655 aa30.46■■■□□ 2.47
AC055876.1-201ENST00000430589 FMR1Q06787 632 aaKnown RBP eCLIP30.45■■■□□ 2.47
AC055876.1-201ENST00000430589 CXCL9Q07325 125 aa30.45■■■□□ 2.47
AC055876.1-201ENST00000430589 NLRP10Q86W26 655 aa30.45■■■□□ 2.47
AC055876.1-201ENST00000430589 CAPNS2Q96L46 248 aa30.45■■■□□ 2.47
AC055876.1-201ENST00000430589 RTFDC1Q9BY42 306 aaPredicted RBP30.45■■■□□ 2.47
AC055876.1-201ENST00000430589 TRAF5O00463 557 aa30.44■■■□□ 2.46
AC055876.1-201ENST00000430589 HSPA8P11142 646 aaKnown RBP30.44■■■□□ 2.46
AC055876.1-201ENST00000430589 TCIRG1Q13488 830 aa30.44■■■□□ 2.46
AC055876.1-201ENST00000430589 BCL2L13Q9BXK5 485 aa30.44■■■□□ 2.46
AC055876.1-201ENST00000430589 SH3TC1Q8TE82 1336 aa30.44■■■□□ 2.46
AC055876.1-201ENST00000430589 LTBP1Q14766 1721 aa30.43■■■□□ 2.46
AC055876.1-201ENST00000430589 NEUROD2Q15784 382 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms