RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 CDCA8Q53HL2 280 aa13.6□□□□□ -0.23
ATG4B-211ENST00000429899 SLC51AQ86UW1 340 aa13.6□□□□□ -0.23
ATG4B-211ENST00000429899 CENPFP49454 3210 aa13.6□□□□□ -0.23
ATG4B-211ENST00000429899 CUL9Q8IWT3 2517 aa13.59□□□□□ -0.23
ATG4B-211ENST00000429899 ADARB2Q9NS39 739 aaKnown RBP13.59□□□□□ -0.23
ATG4B-211ENST00000429899 A1BGP04217 495 aa13.58□□□□□ -0.24
ATG4B-211ENST00000429899 IL6STP40189 918 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-211ENST00000429899 NBPF5PQ86XG9 351 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-211ENST00000429899 ZNF496Q96IT1 587 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-211ENST00000429899 PSMD1Q99460 953 aa13.58□□□□□ -0.24
ATG4B-211ENST00000429899 FAM155AB1AL88 458 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-211ENST00000429899 RGMBQ6NW40 437 aa13.57□□□□□ -0.24
ATG4B-211ENST00000429899 DLK2Q6UY11 383 aa13.57□□□□□ -0.24
ATG4B-211ENST00000429899 LARGE2Q8N3Y3 721 aa13.57□□□□□ -0.24
ATG4B-211ENST00000429899 GPRC5DQ9NZD1 345 aa13.57□□□□□ -0.24
ATG4B-211ENST00000429899 BRCA2P51587 3418 aa13.57□□□□□ -0.24
ATG4B-211ENST00000429899 HEG1Q9ULI3 1381 aa13.57□□□□□ -0.24
ATG4B-211ENST00000429899 TRIOBPQ9H2D6 2365 aa13.56□□□□□ -0.24
ATG4B-211ENST00000429899 SLC17A8Q8NDX2 589 aa13.56□□□□□ -0.24
ATG4B-211ENST00000429899 HDAC9Q9UKV0 1011 aa13.56□□□□□ -0.24
ATG4B-211ENST00000429899 PAPPA2Q9BXP8 1791 aa13.55□□□□□ -0.24
ATG4B-211ENST00000429899 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-211ENST00000429899 DZIP3Q86Y13 1208 aaKnown RBP13.55□□□□□ -0.24
ATG4B-211ENST00000429899 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
ATG4B-211ENST00000429899 PGAP2Q9UHJ9 254 aa13.55□□□□□ -0.24
ATG4B-211ENST00000429899 RBBP6Q7Z6E9 1792 aaKnown RBP13.55□□□□□ -0.24
ATG4B-211ENST00000429899 A0A0C4DFX4 3053 aa13.55□□□□□ -0.24
ATG4B-211ENST00000429899 TAF1P21675 1872 aa13.55□□□□□ -0.24
ATG4B-211ENST00000429899 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
ATG4B-211ENST00000429899 IL13P35225 146 aa13.54□□□□□ -0.24
ATG4B-211ENST00000429899 HIRAP54198 1017 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-211ENST00000429899 PKN2Q16513 984 aaKnown RBP13.54□□□□□ -0.24
ATG4B-211ENST00000429899 CDC37L1Q7L3B6 337 aa13.54□□□□□ -0.24
ATG4B-211ENST00000429899 HTTP42858 3142 aa13.53□□□□□ -0.24
ATG4B-211ENST00000429899 CEP290O15078 2479 aa13.53□□□□□ -0.24
ATG4B-211ENST00000429899 FAM177BA6PVY3 158 aa13.53□□□□□ -0.24
ATG4B-211ENST00000429899 ZNF157P51786 506 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-211ENST00000429899 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
ATG4B-211ENST00000429899 NPM2Q86SE8 214 aaKnown RBP13.53□□□□□ -0.24
ATG4B-211ENST00000429899 USP48Q86UV5 1035 aa13.53□□□□□ -0.24
ATG4B-211ENST00000429899 NIM1KQ8IY84 436 aa13.53□□□□□ -0.24
ATG4B-211ENST00000429899 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
ATG4B-211ENST00000429899 CCDC102AQ96A19 550 aa13.53□□□□□ -0.24
ATG4B-211ENST00000429899 CSRNP1Q96S65 589 aa13.53□□□□□ -0.24
ATG4B-211ENST00000429899 COLQQ9Y215 455 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-211ENST00000429899 LAMB2P55268 1798 aa13.53□□□□□ -0.24
ATG4B-211ENST00000429899 GMPSP49915 693 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-211ENST00000429899 ZNF790Q6PG37 636 aa13.51□□□□□ -0.25
ATG4B-211ENST00000429899 TPTE2Q6XPS3 522 aa13.51□□□□□ -0.25
ATG4B-211ENST00000429899 TRPM4Q8TD43 1214 aa13.51□□□□□ -0.25
ATG4B-211ENST00000429899 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
ATG4B-211ENST00000429899 NPC1L1Q9UHC9 1359 aa13.5□□□□□ -0.25
ATG4B-211ENST00000429899 KIAA0100Q14667 2235 aaKnown RBP13.5□□□□□ -0.25
ATG4B-211ENST00000429899 SHTN1A0MZ66 631 aa13.5□□□□□ -0.25
ATG4B-211ENST00000429899 PER1O15534 1290 aaPredicted RBP13.5□□□□□ -0.25
ATG4B-211ENST00000429899 HMOX1P09601 288 aa13.5□□□□□ -0.25
ATG4B-211ENST00000429899 CXCL9Q07325 125 aa13.5□□□□□ -0.25
ATG4B-211ENST00000429899 CRY2Q49AN0 593 aa13.5□□□□□ -0.25
ATG4B-211ENST00000429899 CLEC4GQ6UXB4 293 aa13.5□□□□□ -0.25
ATG4B-211ENST00000429899 ZC3H15Q8WU90 426 aaKnown RBP13.5□□□□□ -0.25
ATG4B-211ENST00000429899 ZNF296Q8WUU4 475 aaPredicted RBP13.5□□□□□ -0.25
ATG4B-211ENST00000429899 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
ATG4B-211ENST00000429899 GBA2Q9HCG7 927 aaPredicted RBP13.5□□□□□ -0.25
ATG4B-211ENST00000429899 NIP7Q9Y221 180 aaKnown RBP eCLIP13.5□□□□□ -0.25
ATG4B-211ENST00000429899 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
ATG4B-211ENST00000429899 AOC3Q16853 763 aa13.49□□□□□ -0.25
ATG4B-211ENST00000429899 FBXO46Q6PJ61 603 aaPredicted RBP13.49□□□□□ -0.25
ATG4B-211ENST00000429899 MIER1Q8N108 512 aa13.49□□□□□ -0.25
ATG4B-211ENST00000429899 C2orf69Q8N8R5 385 aa13.49□□□□□ -0.25
ATG4B-211ENST00000429899 PANK3Q9H999 370 aa13.49□□□□□ -0.25
ATG4B-211ENST00000429899 PRAMEF22A3QJZ6 481 aa13.48□□□□□ -0.25
ATG4B-211ENST00000429899 POTEFA5A3E0 1075 aa13.48□□□□□ -0.25
ATG4B-211ENST00000429899 PPIP5K2O43314 1243 aa13.48□□□□□ -0.25
ATG4B-211ENST00000429899 KCNQ3O43525 872 aa13.48□□□□□ -0.25
ATG4B-211ENST00000429899 TBC1D8O95759 1140 aa13.48□□□□□ -0.25
ATG4B-211ENST00000429899 SLC10A3P09131 477 aa13.48□□□□□ -0.25
ATG4B-211ENST00000429899 CC2D2BQ6DHV5 1058 aa13.48□□□□□ -0.25
ATG4B-211ENST00000429899 BCL2L13Q9BXK5 485 aa13.48□□□□□ -0.25
ATG4B-211ENST00000429899 USP16Q9Y5T5 823 aa13.48□□□□□ -0.25
ATG4B-211ENST00000429899 COL6A3P12111 3177 aa13.48□□□□□ -0.25
ATG4B-211ENST00000429899 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
ATG4B-211ENST00000429899 LAMB4A4D0S4 1761 aa13.47□□□□□ -0.25
ATG4B-211ENST00000429899 GTF2E1P29083 439 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-211ENST00000429899 HLFQ16534 295 aa13.46□□□□□ -0.25
ATG4B-211ENST00000429899 NUTM1Q86Y26 1132 aa13.46□□□□□ -0.25
ATG4B-211ENST00000429899 FMNL2Q96PY5 1086 aa13.46□□□□□ -0.25
ATG4B-211ENST00000429899 ZNF652Q9Y2D9 606 aa13.46□□□□□ -0.25
ATG4B-211ENST00000429899 RIC1Q4ADV7 1423 aa13.46□□□□□ -0.26
ATG4B-211ENST00000429899 ANKRD36CQ5JPF3 1778 aa13.45□□□□□ -0.26
ATG4B-211ENST00000429899 HOXA10P31260 410 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-211ENST00000429899 KRT26Q7Z3Y9 468 aa13.45□□□□□ -0.26
ATG4B-211ENST00000429899 PRKRIP1Q9H875 184 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-211ENST00000429899 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
ATG4B-211ENST00000429899 ADM5C9JUS6 153 aa13.44□□□□□ -0.26
ATG4B-211ENST00000429899 PPEF1O14829 653 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-211ENST00000429899 ANP32CO43423 234 aa13.44□□□□□ -0.26
ATG4B-211ENST00000429899 RAD17O75943 681 aa13.44□□□□□ -0.26
ATG4B-211ENST00000429899 TEFQ10587 303 aa13.44□□□□□ -0.26
ATG4B-211ENST00000429899 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-211ENST00000429899 CNOT7Q9UIV1 285 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms