RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 UBE3BQ7Z3V4 1068 aa11.24□□□□□ -0.61
NR1I3-209ENST00000428574 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
NR1I3-209ENST00000428574 ZNF34Q8IZ26 560 aa11.24□□□□□ -0.61
NR1I3-209ENST00000428574 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
NR1I3-209ENST00000428574 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
NR1I3-209ENST00000428574 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
NR1I3-209ENST00000428574 LRRCC1Q9C099 1032 aa11.24□□□□□ -0.61
NR1I3-209ENST00000428574 AOX1Q06278 1338 aa11.24□□□□□ -0.61
NR1I3-209ENST00000428574 BMP2KLQ5H9B9 411 aa11.23□□□□□ -0.61
NR1I3-209ENST00000428574 KIF1BPQ96EK5 621 aa11.23□□□□□ -0.61
NR1I3-209ENST00000428574 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
NR1I3-209ENST00000428574 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
NR1I3-209ENST00000428574 COPRSQ9NQ92 184 aa11.23□□□□□ -0.61
NR1I3-209ENST00000428574 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
NR1I3-209ENST00000428574 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
NR1I3-209ENST00000428574 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
NR1I3-209ENST00000428574 MYH14Q7Z406 1995 aaKnown RBP11.22□□□□□ -0.61
NR1I3-209ENST00000428574 RGS17Q9UGC6 210 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-209ENST00000428574 NARFQ9UHQ1 456 aa11.22□□□□□ -0.61
NR1I3-209ENST00000428574 RTCBQ9Y3I0 505 aaKnown RBP11.22□□□□□ -0.61
NR1I3-209ENST00000428574 ZNF330Q9Y3S2 320 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-209ENST00000428574 NUP98P52948 1817 aa11.21□□□□□ -0.61
NR1I3-209ENST00000428574 RTL9Q8NET4 1388 aa11.21□□□□□ -0.61
NR1I3-209ENST00000428574 ZBTB22O15209 634 aa11.21□□□□□ -0.61
NR1I3-209ENST00000428574 PDE4AP27815 886 aa11.21□□□□□ -0.61
NR1I3-209ENST00000428574 SSFA2P28290 1259 aa11.21□□□□□ -0.61
NR1I3-209ENST00000428574 RGS3P49796 1198 aa11.21□□□□□ -0.61
NR1I3-209ENST00000428574 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
NR1I3-209ENST00000428574 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-209ENST00000428574 LNPKQ9C0E8 428 aa11.21□□□□□ -0.61
NR1I3-209ENST00000428574 RNF39Q9H2S5 420 aa11.21□□□□□ -0.61
NR1I3-209ENST00000428574 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.62
NR1I3-209ENST00000428574 LAMB2P55268 1798 aa11.21□□□□□ -0.62
NR1I3-209ENST00000428574 RIC1Q4ADV7 1423 aa11.2□□□□□ -0.62
NR1I3-209ENST00000428574 SALL3Q9BXA9 1300 aa11.2□□□□□ -0.62
NR1I3-209ENST00000428574 USP42Q9H9J4 1324 aaKnown RBP11.2□□□□□ -0.62
NR1I3-209ENST00000428574 SURF6O75683 361 aaKnown RBP11.2□□□□□ -0.62
NR1I3-209ENST00000428574 CSF1RP07333 972 aa11.2□□□□□ -0.62
NR1I3-209ENST00000428574 FOXO4P98177 505 aa11.2□□□□□ -0.62
NR1I3-209ENST00000428574 HLFQ16534 295 aa11.2□□□□□ -0.62
NR1I3-209ENST00000428574 FAM182BQ5T319 152 aa11.2□□□□□ -0.62
NR1I3-209ENST00000428574 BACH2Q9BYV9 841 aa11.2□□□□□ -0.62
NR1I3-209ENST00000428574 STAP2Q9UGK3 403 aa11.2□□□□□ -0.62
NR1I3-209ENST00000428574 COL24A1Q17RW2 1714 aa11.2□□□□□ -0.62
NR1I3-209ENST00000428574 TNS1Q9HBL0 1735 aaKnown RBP11.2□□□□□ -0.62
NR1I3-209ENST00000428574 UBN2Q6ZU65 1347 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 GNPATO15228 680 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 PDE8AO60658 829 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 CIAO1O76071 339 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 TRIM37O94972 964 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-209ENST00000428574 POTEAQ6S8J7 498 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 FLAD1Q8NFF5 587 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 UTP14AQ9BVJ6 771 aaKnown RBP11.19□□□□□ -0.62
NR1I3-209ENST00000428574 NYXQ9GZU5 481 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 TBC1D2BQ9UPU7 963 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
NR1I3-209ENST00000428574 TTC41PQ6P2S7 1318 aa11.18□□□□□ -0.62
NR1I3-209ENST00000428574 LRP5O75197 1615 aa11.18□□□□□ -0.62
NR1I3-209ENST00000428574 ZPR1O75312 459 aa11.18□□□□□ -0.62
NR1I3-209ENST00000428574 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
NR1I3-209ENST00000428574 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.62
NR1I3-209ENST00000428574 LMBR1LQ6UX01 489 aa11.18□□□□□ -0.62
NR1I3-209ENST00000428574 CLASRPQ8N2M8 674 aaKnown RBP11.18□□□□□ -0.62
NR1I3-209ENST00000428574 TRMT112Q9UI30 125 aaKnown RBP11.18□□□□□ -0.62
NR1I3-209ENST00000428574 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
NR1I3-209ENST00000428574 UBR3Q6ZT12 1888 aa11.17□□□□□ -0.62
NR1I3-209ENST00000428574 NTSR2O95665 410 aa11.17□□□□□ -0.62
NR1I3-209ENST00000428574 CTSWP56202 376 aa11.17□□□□□ -0.62
NR1I3-209ENST00000428574 TXNRD1Q16881 649 aa11.17□□□□□ -0.62
NR1I3-209ENST00000428574 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
NR1I3-209ENST00000428574 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
NR1I3-209ENST00000428574 TICAM2Q86XR7 235 aa11.17□□□□□ -0.62
NR1I3-209ENST00000428574 GPATCH3Q96I76 525 aa11.17□□□□□ -0.62
NR1I3-209ENST00000428574 LRRC4BQ9NT99 713 aa11.17□□□□□ -0.62
NR1I3-209ENST00000428574 NIP7Q9Y221 180 aaKnown RBP eCLIP11.17□□□□□ -0.62
NR1I3-209ENST00000428574 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
NR1I3-209ENST00000428574 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-209ENST00000428574 MX1P20591 662 aa11.16□□□□□ -0.62
NR1I3-209ENST00000428574 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-209ENST00000428574 PDE1AP54750 535 aa11.16□□□□□ -0.62
NR1I3-209ENST00000428574 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-209ENST00000428574 CCDC57Q2TAC2 916 aa11.16□□□□□ -0.62
NR1I3-209ENST00000428574 SLC10A5Q5PT55 438 aa11.16□□□□□ -0.62
NR1I3-209ENST00000428574 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
NR1I3-209ENST00000428574 TTC22Q5TAA0 569 aa11.16□□□□□ -0.62
NR1I3-209ENST00000428574 FAM89AQ96GI7 184 aa11.16□□□□□ -0.62
NR1I3-209ENST00000428574 ARXQ96QS3 562 aa11.16□□□□□ -0.62
NR1I3-209ENST00000428574 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
NR1I3-209ENST00000428574 ERC2O15083 957 aa11.15□□□□□ -0.62
NR1I3-209ENST00000428574 APBA3O96018 575 aa11.15□□□□□ -0.62
NR1I3-209ENST00000428574 GPTP24298 496 aa11.15□□□□□ -0.62
NR1I3-209ENST00000428574 RFC4P35249 363 aa11.15□□□□□ -0.62
NR1I3-209ENST00000428574 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
NR1I3-209ENST00000428574 TTLL11Q8NHH1 800 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms