RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 RIC1Q4ADV7 1423 aa22.46■■□□□ 1.19
PSMD4-203ENST00000427779 SNED1Q8TER0 1413 aa22.46■■□□□ 1.19
PSMD4-203ENST00000427779 NUTM1Q86Y26 1132 aa22.45■■□□□ 1.18
PSMD4-203ENST00000427779 NGEFQ8N5V2 710 aa22.45■■□□□ 1.18
PSMD4-203ENST00000427779 MIS18AQ9NYP9 233 aa22.45■■□□□ 1.18
PSMD4-203ENST00000427779 LMOD1P29536 600 aaPredicted RBP22.44■■□□□ 1.18
PSMD4-203ENST00000427779 MAP1SQ66K74 1059 aaPredicted RBP22.44■■□□□ 1.18
PSMD4-203ENST00000427779 RASSF10A6NK89 507 aa22.43■■□□□ 1.18
PSMD4-203ENST00000427779 DEFB115Q30KQ5 88 aa22.43■■□□□ 1.18
PSMD4-203ENST00000427779 HOXA10P31260 410 aaPredicted RBP22.42■■□□□ 1.18
PSMD4-203ENST00000427779 WBP1LQ9NX94 342 aa22.42■■□□□ 1.18
PSMD4-203ENST00000427779 RRP7AQ9Y3A4 280 aaKnown RBP22.42■■□□□ 1.18
PSMD4-203ENST00000427779 RBM17Q96I25 401 aaKnown RBP22.41■■□□□ 1.18
PSMD4-203ENST00000427779 ABT1Q9ULW3 272 aaKnown RBP22.41■■□□□ 1.18
PSMD4-203ENST00000427779 GJA3Q9Y6H8 435 aa22.41■■□□□ 1.18
PSMD4-203ENST00000427779 GPTP24298 496 aa22.4■■□□□ 1.18
PSMD4-203ENST00000427779 EIF4A1P60842 406 aaKnown RBP22.4■■□□□ 1.18
PSMD4-203ENST00000427779 LARGE2Q8N3Y3 721 aa22.4■■□□□ 1.18
PSMD4-203ENST00000427779 COL4A5P29400 1685 aa22.39■■□□□ 1.18
PSMD4-203ENST00000427779 ERBB4Q15303 1308 aa22.39■■□□□ 1.18
PSMD4-203ENST00000427779 MYL6BP14649 208 aa22.39■■□□□ 1.17
PSMD4-203ENST00000427779 MAP2K1Q02750 393 aaPredicted RBP22.39■■□□□ 1.17
PSMD4-203ENST00000427779 TTLL7Q6ZT98 887 aa22.39■■□□□ 1.17
PSMD4-203ENST00000427779 CRAMP1Q96RY5 1269 aa22.39■■□□□ 1.17
PSMD4-203ENST00000427779 ZBTB3Q9H5J0 574 aa22.39■■□□□ 1.17
PSMD4-203ENST00000427779 LTBP1Q14766 1721 aa22.39■■□□□ 1.17
PSMD4-203ENST00000427779 UBN2Q6ZU65 1347 aa22.38■■□□□ 1.17
PSMD4-203ENST00000427779 WDR33Q9C0J8 1336 aaKnown RBP22.38■■□□□ 1.17
PSMD4-203ENST00000427779 PPEF1O14829 653 aaPredicted RBP22.38■■□□□ 1.17
PSMD4-203ENST00000427779 TMX4Q9H1E5 349 aaPredicted RBP22.38■■□□□ 1.17
PSMD4-203ENST00000427779 DDX21Q9NR30 783 aaKnown RBP eCLIP22.38■■□□□ 1.17
PSMD4-203ENST00000427779 TRPM7Q96QT4 1865 aa22.38■■□□□ 1.17
PSMD4-203ENST00000427779 LBX1P52954 281 aa22.37■■□□□ 1.17
PSMD4-203ENST00000427779 SUSD4Q5VX71 490 aa22.37■■□□□ 1.17
PSMD4-203ENST00000427779 PPP1R42Q7Z4L9 355 aa22.37■■□□□ 1.17
PSMD4-203ENST00000427779 NFE2L2Q16236 605 aa22.36■■□□□ 1.17
PSMD4-203ENST00000427779 PARP10Q53GL7 1025 aa22.36■■□□□ 1.17
PSMD4-203ENST00000427779 GIGYF2Q6Y7W6 1299 aaKnown RBP22.36■■□□□ 1.17
PSMD4-203ENST00000427779 NIM1KQ8IY84 436 aa22.36■■□□□ 1.17
PSMD4-203ENST00000427779 ZNF34Q8IZ26 560 aa22.36■■□□□ 1.17
PSMD4-203ENST00000427779 PNNQ9H307 717 aaKnown RBP22.36■■□□□ 1.17
PSMD4-203ENST00000427779 NTSR2O95665 410 aa22.35■■□□□ 1.17
PSMD4-203ENST00000427779 SCNN1DP51172 638 aa22.35■■□□□ 1.17
PSMD4-203ENST00000427779 USP50Q70EL3 339 aaPredicted RBP22.35■■□□□ 1.17
PSMD4-203ENST00000427779 NLRP3Q96P20 1036 aa22.35■■□□□ 1.17
PSMD4-203ENST00000427779 THSD7BQ9C0I4 1608 aa22.35■■□□□ 1.17
PSMD4-203ENST00000427779 MAPK8IP3Q9UPT6 1336 aa22.34■■□□□ 1.17
PSMD4-203ENST00000427779 EPS15P42566 896 aa22.34■■□□□ 1.17
PSMD4-203ENST00000427779 ECE1P42892 770 aa22.34■■□□□ 1.17
PSMD4-203ENST00000427779 PLEKHF1Q96S99 279 aa22.34■■□□□ 1.17
PSMD4-203ENST00000427779 VPS33BQ9H267 617 aa22.34■■□□□ 1.17
PSMD4-203ENST00000427779 TCERG1O14776 1098 aaKnown RBP22.33■■□□□ 1.17
PSMD4-203ENST00000427779 PPIP5K2O43314 1243 aa22.33■■□□□ 1.17
PSMD4-203ENST00000427779 HSPA8P11142 646 aaKnown RBP22.33■■□□□ 1.17
PSMD4-203ENST00000427779 PAXIP1Q6ZW49 1069 aaPredicted RBP22.32■■□□□ 1.16
PSMD4-203ENST00000427779 THUMPD2Q9BTF0 503 aaKnown RBP22.32■■□□□ 1.16
PSMD4-203ENST00000427779 ANKRD36CQ5JPF3 1778 aa22.31■■□□□ 1.16
PSMD4-203ENST00000427779 SUPT20HQ8NEM7 779 aa22.31■■□□□ 1.16
PSMD4-203ENST00000427779 BEGAINQ9BUH8 593 aa22.31■■□□□ 1.16
PSMD4-203ENST00000427779 ATP6V0A2Q9Y487 856 aa22.31■■□□□ 1.16
PSMD4-203ENST00000427779 CAPNS2Q96L46 248 aa22.3■■□□□ 1.16
PSMD4-203ENST00000427779 UTP14AQ9BVJ6 771 aaKnown RBP22.3■■□□□ 1.16
PSMD4-203ENST00000427779 TSPYL4Q9UJ04 414 aa22.3■■□□□ 1.16
PSMD4-203ENST00000427779 AOC3Q16853 763 aa22.29■■□□□ 1.16
PSMD4-203ENST00000427779 SLC10A5Q5PT55 438 aa22.29■■□□□ 1.16
PSMD4-203ENST00000427779 C3orf67Q6ZVT6 689 aa22.29■■□□□ 1.16
PSMD4-203ENST00000427779 ADARB2Q9NS39 739 aaKnown RBP22.29■■□□□ 1.16
PSMD4-203ENST00000427779 LAMB2P55268 1798 aa22.28■■□□□ 1.16
PSMD4-203ENST00000427779 GPRC5DQ9NZD1 345 aa22.28■■□□□ 1.16
PSMD4-203ENST00000427779 ZNRF3Q9ULT6 936 aa22.28■■□□□ 1.16
PSMD4-203ENST00000427779 SLC51AQ86UW1 340 aa22.27■■□□□ 1.16
PSMD4-203ENST00000427779 GPR101Q96P66 508 aaPredicted RBP22.27■■□□□ 1.16
PSMD4-203ENST00000427779 TLL2Q9Y6L7 1015 aa22.27■■□□□ 1.16
PSMD4-203ENST00000427779 ABCC4O15439 1325 aa22.27■■□□□ 1.16
PSMD4-203ENST00000427779 BBOX1O75936 387 aa22.26■■□□□ 1.15
PSMD4-203ENST00000427779 EIF2S2P20042 333 aaKnown RBP22.26■■□□□ 1.15
PSMD4-203ENST00000427779 FMR1Q06787 632 aaKnown RBP eCLIP22.26■■□□□ 1.15
PSMD4-203ENST00000427779 GRM1Q13255 1194 aa22.26■■□□□ 1.15
PSMD4-203ENST00000427779 HSP90AB3PQ58FF7 597 aa22.26■■□□□ 1.15
PSMD4-203ENST00000427779 CYP4F22Q6NT55 531 aa22.26■■□□□ 1.15
PSMD4-203ENST00000427779 ABHD8Q96I13 439 aa22.26■■□□□ 1.15
PSMD4-203ENST00000427779 RTFDC1Q9BY42 306 aaPredicted RBP22.26■■□□□ 1.15
PSMD4-203ENST00000427779 BABAM1Q9NWV8 329 aa22.26■■□□□ 1.15
PSMD4-203ENST00000427779 CDHR2Q9BYE9 1310 aa22.26■■□□□ 1.15
PSMD4-203ENST00000427779 TRAF5O00463 557 aa22.25■■□□□ 1.15
PSMD4-203ENST00000427779 PDIA6Q15084 440 aa22.25■■□□□ 1.15
PSMD4-203ENST00000427779 CST9Q5W186 159 aa22.25■■□□□ 1.15
PSMD4-203ENST00000427779 DPP8Q6V1X1 898 aaPredicted RBP22.25■■□□□ 1.15
PSMD4-203ENST00000427779 LRP10Q7Z4F1 713 aa22.25■■□□□ 1.15
PSMD4-203ENST00000427779 CXCL9Q07325 125 aa22.24■■□□□ 1.15
PSMD4-203ENST00000427779 SP8Q8IXZ3 490 aa22.24■■□□□ 1.15
PSMD4-203ENST00000427779 MPNDQ8N594 471 aa22.24■■□□□ 1.15
PSMD4-203ENST00000427779 MAP2K2P36507 400 aa22.23■■□□□ 1.15
PSMD4-203ENST00000427779 CIAPIN1Q6FI81 312 aa22.23■■□□□ 1.15
PSMD4-203ENST00000427779 GMPSP49915 693 aaPredicted RBP22.22■■□□□ 1.15
PSMD4-203ENST00000427779 LMOD3Q0VAK6 560 aa22.22■■□□□ 1.15
PSMD4-203ENST00000427779 KIAA2012Q0VF49 1180 aa22.22■■□□□ 1.15
PSMD4-203ENST00000427779 TNIP1Q15025 636 aa22.22■■□□□ 1.15
PSMD4-203ENST00000427779 DDX46Q7L014 1031 aaKnown RBP22.22■■□□□ 1.15
PSMD4-203ENST00000427779 BCL2L13Q9BXK5 485 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms