RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 NUTM1Q86Y26 1132 aa32.17■■■□□ 2.74
HERPUD2-205ENST00000427455 UTRNP46939 3433 aa32.17■■■□□ 2.74
HERPUD2-205ENST00000427455 TNRC6CQ9HCJ0 1690 aaKnown RBP32.16■■■□□ 2.74
HERPUD2-205ENST00000427455 PI4KAP2A4QPH2 592 aa32.16■■■□□ 2.74
HERPUD2-205ENST00000427455 PI4KAP1Q8N8J0 262 aa32.16■■■□□ 2.74
HERPUD2-205ENST00000427455 METTL22Q9BUU2 404 aaPredicted RBP32.16■■■□□ 2.74
HERPUD2-205ENST00000427455 PIM2Q9P1W9 311 aa32.16■■■□□ 2.74
HERPUD2-205ENST00000427455 WWC3Q9ULE0 1092 aa32.16■■■□□ 2.74
HERPUD2-205ENST00000427455 MAP3K2Q9Y2U5 619 aa32.16■■■□□ 2.74
HERPUD2-205ENST00000427455 TRIM28Q13263 835 aaKnown RBP32.15■■■□□ 2.74
HERPUD2-205ENST00000427455 FKBP5Q13451 457 aaPredicted RBP32.15■■■□□ 2.74
HERPUD2-205ENST00000427455 ERFEQ4G0M1 354 aa32.15■■■□□ 2.74
HERPUD2-205ENST00000427455 ATP5J2-PTCD1G3V325 749 aa32.14■■■□□ 2.74
HERPUD2-205ENST00000427455 MYD88Q99836 296 aa32.14■■■□□ 2.74
HERPUD2-205ENST00000427455 TRMT112Q9UI30 125 aaKnown RBP32.12■■■□□ 2.73
HERPUD2-205ENST00000427455 BCS1LQ9Y276 419 aa32.12■■■□□ 2.73
HERPUD2-205ENST00000427455 KLRG2A4D1S0 409 aaPredicted RBP32.11■■■□□ 2.73
HERPUD2-205ENST00000427455 GRIN3BO60391 1043 aa32.11■■■□□ 2.73
HERPUD2-205ENST00000427455 DALRD3Q5D0E6 543 aaKnown RBP32.11■■■□□ 2.73
HERPUD2-205ENST00000427455 ARFGEF1Q9Y6D6 1849 aa32.11■■■□□ 2.73
HERPUD2-205ENST00000427455 NEXNQ0ZGT2 675 aa32.1■■■□□ 2.73
HERPUD2-205ENST00000427455 SH3TC1Q8TE82 1336 aa32.09■■■□□ 2.73
HERPUD2-205ENST00000427455 SRGNP10124 158 aa32.09■■■□□ 2.73
HERPUD2-205ENST00000427455 ALDH1L2Q3SY69 923 aa32.09■■■□□ 2.73
HERPUD2-205ENST00000427455 CCDC191Q8NCU4 936 aa32.09■■■□□ 2.73
HERPUD2-205ENST00000427455 SSH1Q8WYL5 1049 aa32.09■■■□□ 2.73
HERPUD2-205ENST00000427455 MRPL50Q8N5N7 158 aaKnown RBP32.08■■■□□ 2.73
HERPUD2-205ENST00000427455 SLC10A5Q5PT55 438 aa32.07■■■□□ 2.72
HERPUD2-205ENST00000427455 STYK1Q6J9G0 422 aa32.07■■■□□ 2.72
HERPUD2-205ENST00000427455 TTLL6Q8N841 843 aa32.07■■■□□ 2.72
HERPUD2-205ENST00000427455 DNAAF4Q8WXU2 420 aa32.07■■■□□ 2.72
HERPUD2-205ENST00000427455 ZNF622Q969S3 477 aaKnown RBP eCLIP32.07■■■□□ 2.72
HERPUD2-205ENST00000427455 MASTLQ96GX5 879 aa32.07■■■□□ 2.72
HERPUD2-205ENST00000427455 CRY2Q49AN0 593 aa32.06■■■□□ 2.72
HERPUD2-205ENST00000427455 CWC25Q9NXE8 425 aaPredicted RBP32.06■■■□□ 2.72
HERPUD2-205ENST00000427455 LAMB2P55268 1798 aa32.05■■■□□ 2.72
HERPUD2-205ENST00000427455 NPR1P16066 1061 aa32.05■■■□□ 2.72
HERPUD2-205ENST00000427455 SMC4Q9NTJ3 1288 aa32.05■■■□□ 2.72
HERPUD2-205ENST00000427455 DDX60Q8IY21 1712 aaKnown RBP32.04■■■□□ 2.72
HERPUD2-205ENST00000427455 IGKV5-2P06315 115 aa32.04■■■□□ 2.72
HERPUD2-205ENST00000427455 BCL2L13Q9BXK5 485 aa32.04■■■□□ 2.72
HERPUD2-205ENST00000427455 CNKSR1Q969H4 720 aa32.03■■■□□ 2.72
HERPUD2-205ENST00000427455 FAM89AQ96GI7 184 aa32.03■■■□□ 2.72
HERPUD2-205ENST00000427455 NLRP3Q96P20 1036 aa32.03■■■□□ 2.72
HERPUD2-205ENST00000427455 PTPRCP08575 1304 aa32.02■■■□□ 2.72
HERPUD2-205ENST00000427455 CACNA1SQ13698 1873 aa32.02■■■□□ 2.72
HERPUD2-205ENST00000427455 SYNE4Q8N205 404 aa32.02■■■□□ 2.72
HERPUD2-205ENST00000427455 ZBTB38Q8NAP3 1195 aaPredicted RBP32.02■■■□□ 2.72
HERPUD2-205ENST00000427455 NEURL1BA8MQ27 555 aa32.01■■■□□ 2.71
HERPUD2-205ENST00000427455 F6X3S4 739 aa32.01■■■□□ 2.71
HERPUD2-205ENST00000427455 HCLS1P14317 486 aaPredicted RBP32.01■■■□□ 2.71
HERPUD2-205ENST00000427455 CWF19L2Q2TBE0 894 aaKnown RBP32.01■■■□□ 2.71
HERPUD2-205ENST00000427455 LINS1Q8NG48 757 aa32■■■□□ 2.71
HERPUD2-205ENST00000427455 PCCAP05165 728 aaPredicted RBP31.99■■■□□ 2.71
HERPUD2-205ENST00000427455 C3orf67Q6ZVT6 689 aa31.99■■■□□ 2.71
HERPUD2-205ENST00000427455 RPGRQ92834 1020 aaKnown RBP31.99■■■□□ 2.71
HERPUD2-205ENST00000427455 CHD4Q14839 1912 aa31.98■■■□□ 2.71
HERPUD2-205ENST00000427455 RARSP54136 660 aaKnown RBP31.98■■■□□ 2.71
HERPUD2-205ENST00000427455 RTL5Q5HYW3 569 aaPredicted RBP31.98■■■□□ 2.71
HERPUD2-205ENST00000427455 PRPF40BQ6NWY9 871 aaKnown RBP31.98■■■□□ 2.71
HERPUD2-205ENST00000427455 IRS4O14654 1257 aaPredicted RBP31.97■■■□□ 2.71
HERPUD2-205ENST00000427455 HSP90B1P14625 803 aaKnown RBP31.97■■■□□ 2.71
HERPUD2-205ENST00000427455 HOXA10P31260 410 aaPredicted RBP31.97■■■□□ 2.71
HERPUD2-205ENST00000427455 BRPF1P55201 1214 aaPredicted RBP31.97■■■□□ 2.71
HERPUD2-205ENST00000427455 SLX4Q8IY92 1834 aa31.97■■■□□ 2.71
HERPUD2-205ENST00000427455 ALDH1B1P30837 517 aa31.96■■■□□ 2.71
HERPUD2-205ENST00000427455 BEND3Q5T5X7 828 aa31.95■■■□□ 2.71
HERPUD2-205ENST00000427455 GCKRQ14397 625 aa31.94■■■□□ 2.7
HERPUD2-205ENST00000427455 RBM17Q96I25 401 aaKnown RBP31.94■■■□□ 2.7
HERPUD2-205ENST00000427455 CDHR2Q9BYE9 1310 aa31.94■■■□□ 2.7
HERPUD2-205ENST00000427455 CRAMP1Q96RY5 1269 aa31.93■■■□□ 2.7
HERPUD2-205ENST00000427455 KIF16BQ96L93 1317 aa31.93■■■□□ 2.7
HERPUD2-205ENST00000427455 SLC4A10Q6U841 1118 aa31.92■■■□□ 2.7
HERPUD2-205ENST00000427455 ARHGAP27Q6ZUM4 889 aa31.92■■■□□ 2.7
HERPUD2-205ENST00000427455 C21orf2O43822 256 aa31.9■■■□□ 2.7
HERPUD2-205ENST00000427455 SF3B3Q15393 1217 aaKnown RBP31.9■■■□□ 2.7
HERPUD2-205ENST00000427455 SOGA3Q5TF21 947 aa31.9■■■□□ 2.7
HERPUD2-205ENST00000427455 JARID2Q92833 1246 aaPredicted RBP31.9■■■□□ 2.7
HERPUD2-205ENST00000427455 H7C1W4 665 aa31.89■■■□□ 2.7
HERPUD2-205ENST00000427455 ALDH1L1O75891 902 aa31.89■■■□□ 2.7
HERPUD2-205ENST00000427455 UBE3BQ7Z3V4 1068 aa31.89■■■□□ 2.7
HERPUD2-205ENST00000427455 SRCIN1Q9C0H9 1055 aa31.89■■■□□ 2.7
HERPUD2-205ENST00000427455 PDE8AO60658 829 aa31.88■■■□□ 2.69
HERPUD2-205ENST00000427455 ZNF219Q9P2Y4 722 aaPredicted RBP31.88■■■□□ 2.69
HERPUD2-205ENST00000427455 NOB1Q9ULX3 412 aaKnown RBP31.88■■■□□ 2.69
HERPUD2-205ENST00000427455 ABCC4O15439 1325 aa31.88■■■□□ 2.69
HERPUD2-205ENST00000427455 DDX46Q7L014 1031 aaKnown RBP31.87■■■□□ 2.69
HERPUD2-205ENST00000427455 C7orf43Q8WVR3 580 aa31.87■■■□□ 2.69
HERPUD2-205ENST00000427455 MYH3P11055 1940 aa31.87■■■□□ 2.69
HERPUD2-205ENST00000427455 API5Q9BZZ5 524 aaKnown RBP31.86■■■□□ 2.69
HERPUD2-205ENST00000427455 FER1L6Q2WGJ9 1857 aa31.86■■■□□ 2.69
HERPUD2-205ENST00000427455 CASP7P55210 303 aa31.84■■■□□ 2.69
HERPUD2-205ENST00000427455 CCDC93Q567U6 631 aa31.84■■■□□ 2.69
HERPUD2-205ENST00000427455 GRM8O00222 908 aa31.83■■■□□ 2.69
HERPUD2-205ENST00000427455 PPEF1O14829 653 aaPredicted RBP31.83■■■□□ 2.69
HERPUD2-205ENST00000427455 BCAR3O75815 825 aa31.83■■■□□ 2.69
HERPUD2-205ENST00000427455 CTSWP56202 376 aa31.83■■■□□ 2.69
HERPUD2-205ENST00000427455 GRAPQ13588 217 aa31.83■■■□□ 2.69
HERPUD2-205ENST00000427455 CCDC152Q4G0S7 254 aa31.83■■■□□ 2.69
HERPUD2-205ENST00000427455 GRAPLQ8TC17 118 aaPredicted RBP31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms