RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
SP1-202ENST00000426431 MAP7D2Q96T17 732 aa11.83□□□□□ -0.52
SP1-202ENST00000426431 MAP3K11Q16584 847 aa11.83□□□□□ -0.52
SP1-202ENST00000426431 KIF2AO00139 706 aaPredicted RBP11.83□□□□□ -0.52
SP1-202ENST00000426431 ATP2B3Q16720 1220 aa11.83□□□□□ -0.52
SP1-202ENST00000426431 GOLGA8AA7E2F4 631 aa11.83□□□□□ -0.52
SP1-202ENST00000426431 GOLGA8BA8MQT2 603 aa11.83□□□□□ -0.52
SP1-202ENST00000426431 TANGO6Q9C0B7 1094 aa11.83□□□□□ -0.52
SP1-202ENST00000426431 XAGE3Q8WTP9 111 aa11.83□□□□□ -0.52
SP1-202ENST00000426431 UPF3BQ9BZI7 483 aaKnown RBP11.83□□□□□ -0.52
SP1-202ENST00000426431 KAT14Q9H8E8 782 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 PZPP20742 1482 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 CCDC184Q52MB2 194 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
SP1-202ENST00000426431 ANO10Q9NW15 660 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 VPS36Q86VN1 386 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 CCDC148Q8NFR7 591 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 FEZ1Q99689 392 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 A0A1W2PP64 1363 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 ATP8B2P98198 1209 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 CEBPZQ03701 1054 aaKnown RBP11.82□□□□□ -0.52
SP1-202ENST00000426431 RHPN1Q8TCX5 695 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 SSBP05455 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
SP1-202ENST00000426431 MCM5P33992 734 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 C8orf37Q96NL8 207 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 PARP3Q9Y6F1 533 aa11.82□□□□□ -0.52
SP1-202ENST00000426431 HOXC9P31274 260 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 NCKAP5LQ9HCH0 1330 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 ESR2Q92731 530 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 ZNF622Q969S3 477 aaKnown RBP eCLIP11.81□□□□□ -0.521e-7■■■□□ 16.2
SP1-202ENST00000426431 TESK2Q96S53 571 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 NBPF7P0C2Y1 421 aaPredicted RBP11.81□□□□□ -0.52
SP1-202ENST00000426431 CALM1P0DP23 149 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 CALM2P0DP24 149 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 CALM3P0DP25 149 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 COPS6Q7L5N1 327 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 CCDC150Q8NCX0 1101 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 CETN1Q12798 172 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 TTC22Q5TAA0 569 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 NF2P35240 595 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 FKBP15Q5T1M5 1219 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 ZSCAN16Q9H4T2 348 aaPredicted RBP11.81□□□□□ -0.52
SP1-202ENST00000426431 TCP11L1Q9NUJ3 509 aa11.81□□□□□ -0.52
SP1-202ENST00000426431 TTLL12Q14166 644 aaPredicted RBP11.8□□□□□ -0.52
SP1-202ENST00000426431 DZIP3Q86Y13 1208 aaKnown RBP11.8□□□□□ -0.52
SP1-202ENST00000426431 RAD50Q92878 1312 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 TSPY2A6NKD2 308 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 GOLIM4O00461 696 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 IARSP41252 1262 aaKnown RBP11.8□□□□□ -0.52
SP1-202ENST00000426431 NLRP5P59047 1200 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 DDX19AQ9NUU7 478 aaKnown RBP11.8□□□□□ -0.52
SP1-202ENST00000426431 NIP7Q9Y221 180 aaKnown RBP eCLIP11.8□□□□□ -0.52
SP1-202ENST00000426431 RTL1A6NKG5 1358 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 SBNO2Q9Y2G9 1366 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 TMEM67Q5HYA8 995 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 CALML4Q96GE6 196 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 GCC2Q8IWJ2 1684 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 ABCA8O94911 1581 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 PLEKHG3A1L390 1219 aa11.8□□□□□ -0.52
SP1-202ENST00000426431 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
SP1-202ENST00000426431 NEK1Q96PY6 1258 aa11.79□□□□□ -0.52
SP1-202ENST00000426431 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
SP1-202ENST00000426431 PAF1Q8N7H5 531 aa11.79□□□□□ -0.52
SP1-202ENST00000426431 DDX21Q9NR30 783 aaKnown RBP eCLIP11.79□□□□□ -0.52
SP1-202ENST00000426431 RNMTO43148 476 aaKnown RBP11.79□□□□□ -0.52
SP1-202ENST00000426431 ERMNQ8TAM6 284 aa11.79□□□□□ -0.52
SP1-202ENST00000426431 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
SP1-202ENST00000426431 KDM5DQ9BY66 1539 aa11.79□□□□□ -0.52
SP1-202ENST00000426431 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
SP1-202ENST00000426431 NUCB1Q02818 461 aa11.79□□□□□ -0.52
SP1-202ENST00000426431 ATP5J2-PTCD1G3V325 749 aa11.79□□□□□ -0.52
SP1-202ENST00000426431 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
SP1-202ENST00000426431 KDM4AO75164 1064 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 ZRSR2Q15696 482 aaKnown RBP11.78□□□□□ -0.52
SP1-202ENST00000426431 JAKMIP3Q5VZ66 844 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 FAM114A1Q8IWE2 563 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 MLH3Q9UHC1 1453 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 MATR3P43243 847 aaKnown RBP eCLIP11.78□□□□□ -0.52
SP1-202ENST00000426431 HOOK2Q96ED9 719 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 RNF214Q8ND24 703 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 MCM4P33991 863 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 EIF5P55010 431 aaKnown RBP11.78□□□□□ -0.52
SP1-202ENST00000426431 CCDC183Q5T5S1 534 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 MAST3O60307 1309 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 ERLIN1O75477 346 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 MTHFSDQ2M296 383 aaKnown RBP11.78□□□□□ -0.52
SP1-202ENST00000426431 CCDC181Q5TID7 509 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 ZC3H12CQ9C0D7 883 aaKnown RBP11.78□□□□□ -0.52
SP1-202ENST00000426431 CCDC83Q8IWF9 413 aa11.78□□□□□ -0.52
SP1-202ENST00000426431 RBM17Q96I25 401 aaKnown RBP11.78□□□□□ -0.52
SP1-202ENST00000426431 MAP3K19Q56UN5 1328 aa11.77□□□□□ -0.52
SP1-202ENST00000426431 USP37Q86T82 979 aa11.77□□□□□ -0.52
SP1-202ENST00000426431 SMARCA5O60264 1052 aaPredicted RBP11.77□□□□□ -0.52
SP1-202ENST00000426431 NAA16Q6N069 864 aaPredicted RBP11.77□□□□□ -0.52
SP1-202ENST00000426431 RTL9Q8NET4 1388 aa11.77□□□□□ -0.53
SP1-202ENST00000426431 MCMDC2Q4G0Z9 681 aa11.77□□□□□ -0.53
SP1-202ENST00000426431 JDP2Q8WYK2 163 aa11.77□□□□□ -0.53
SP1-202ENST00000426431 EYA1Q99502 592 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms