RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 ZNF280CQ8ND82 737 aa10.36□□□□□ -0.75
HMGB1P32-201ENST00000425971 GPR152Q8TDT2 470 aa10.36□□□□□ -0.75
HMGB1P32-201ENST00000425971 FAM13BQ9NYF5 915 aa10.36□□□□□ -0.75
HMGB1P32-201ENST00000425971 OPLAHO14841 1288 aa10.35□□□□□ -0.75
HMGB1P32-201ENST00000425971 DGAT1O75907 488 aa10.35□□□□□ -0.75
HMGB1P32-201ENST00000425971 MSX1P28360 303 aa10.35□□□□□ -0.75
HMGB1P32-201ENST00000425971 CRIPAKQ8N1N5 446 aa10.35□□□□□ -0.75
HMGB1P32-201ENST00000425971 NUDT16Q96DE0 195 aaKnown RBP10.35□□□□□ -0.75
HMGB1P32-201ENST00000425971 TIMMDC1Q9NPL8 285 aa10.35□□□□□ -0.75
HMGB1P32-201ENST00000425971 IDH3AP50213 366 aa10.34□□□□□ -0.75
HMGB1P32-201ENST00000425971 ANKIB1Q9P2G1 1089 aa10.34□□□□□ -0.75
HMGB1P32-201ENST00000425971 LCE2BO14633 110 aa10.33□□□□□ -0.76
HMGB1P32-201ENST00000425971 PCSK2P16519 638 aa10.33□□□□□ -0.76
HMGB1P32-201ENST00000425971 BICDL1Q6ZP65 573 aa10.33□□□□□ -0.76
HMGB1P32-201ENST00000425971 NIF3L1Q9GZT8 377 aa10.33□□□□□ -0.76
HMGB1P32-201ENST00000425971 GGNBP2Q9H3C7 697 aa10.33□□□□□ -0.76
HMGB1P32-201ENST00000425971 FIGNL2A6NMB9 653 aa10.32□□□□□ -0.76
HMGB1P32-201ENST00000425971 PRPF40AO75400 957 aaKnown RBP10.32□□□□□ -0.76
HMGB1P32-201ENST00000425971 INPP5BP32019 993 aa10.32□□□□□ -0.76
HMGB1P32-201ENST00000425971 MAPK8P45983 427 aa10.32□□□□□ -0.76
HMGB1P32-201ENST00000425971 ENOX2Q16206 610 aaKnown RBP10.32□□□□□ -0.76
HMGB1P32-201ENST00000425971 ZFP42Q96MM3 310 aa10.32□□□□□ -0.76
HMGB1P32-201ENST00000425971 CRISPLD1Q9H336 500 aa10.32□□□□□ -0.76
HMGB1P32-201ENST00000425971 DNMT3LQ9UJW3 386 aa10.32□□□□□ -0.76
HMGB1P32-201ENST00000425971 RPLP1P05386 114 aaKnown RBP10.31□□□□□ -0.76
HMGB1P32-201ENST00000425971 LDHBP07195 334 aaKnown RBP10.31□□□□□ -0.76
HMGB1P32-201ENST00000425971 ARSDP51689 593 aa10.31□□□□□ -0.76
HMGB1P32-201ENST00000425971 BTLAQ7Z6A9 289 aa10.31□□□□□ -0.76
HMGB1P32-201ENST00000425971 PIK3R5Q8WYR1 880 aa10.31□□□□□ -0.76
HMGB1P32-201ENST00000425971 A0A1W2PNR3 127 aa10.3□□□□□ -0.76
HMGB1P32-201ENST00000425971 AXIN1O15169 862 aa10.3□□□□□ -0.76
HMGB1P32-201ENST00000425971 FGD1P98174 961 aa10.3□□□□□ -0.76
HMGB1P32-201ENST00000425971 TYRO3Q06418 890 aa10.3□□□□□ -0.76
HMGB1P32-201ENST00000425971 MRPL58Q14197 206 aaKnown RBP10.3□□□□□ -0.76
HMGB1P32-201ENST00000425971 LRRC69Q6ZNQ3 347 aa10.3□□□□□ -0.76
HMGB1P32-201ENST00000425971 DYRK1BQ9Y463 629 aa10.3□□□□□ -0.76
HMGB1P32-201ENST00000425971 RECKO95980 971 aa10.29□□□□□ -0.76
HMGB1P32-201ENST00000425971 ARSJQ5FYB0 599 aaPredicted RBP10.29□□□□□ -0.76
HMGB1P32-201ENST00000425971 WWC3Q9ULE0 1092 aa10.29□□□□□ -0.76
HMGB1P32-201ENST00000425971 BAZ1BQ9UIG0 1483 aaKnown RBP10.29□□□□□ -0.76
HMGB1P32-201ENST00000425971 SENP3-EIF4A1A0A087X0R7 540 aa10.28□□□□□ -0.76
HMGB1P32-201ENST00000425971 PNMA6FA0A0J9YX94 578 aa10.28□□□□□ -0.76
HMGB1P32-201ENST00000425971 A6NHS1 94 aa10.28□□□□□ -0.76
HMGB1P32-201ENST00000425971 GRNP28799 593 aaKnown RBP10.28□□□□□ -0.76
HMGB1P32-201ENST00000425971 TRIP4Q15650 581 aaPredicted RBP10.28□□□□□ -0.76
HMGB1P32-201ENST00000425971 C8orf34Q49A92 452 aa10.28□□□□□ -0.76
HMGB1P32-201ENST00000425971 SETDB2Q96T68 719 aa10.28□□□□□ -0.76
HMGB1P32-201ENST00000425971 CFHR5Q9BXR6 569 aa10.28□□□□□ -0.76
HMGB1P32-201ENST00000425971 F11P03951 625 aa10.27□□□□□ -0.77
HMGB1P32-201ENST00000425971 ATP2B2Q01814 1243 aa10.27□□□□□ -0.77
HMGB1P32-201ENST00000425971 ORC1Q13415 861 aa10.27□□□□□ -0.77
HMGB1P32-201ENST00000425971 CSRNP1Q96S65 589 aa10.27□□□□□ -0.77
HMGB1P32-201ENST00000425971 DUSP9Q99956 384 aaKnown RBP10.27□□□□□ -0.77
HMGB1P32-201ENST00000425971 GPAMQ9HCL2 828 aa10.27□□□□□ -0.77
HMGB1P32-201ENST00000425971 NEUROD4Q9HD90 331 aa10.27□□□□□ -0.77
HMGB1P32-201ENST00000425971 USP20Q9Y2K6 914 aa10.27□□□□□ -0.77
HMGB1P32-201ENST00000425971 RTCBQ9Y3I0 505 aaKnown RBP10.27□□□□□ -0.77
HMGB1P32-201ENST00000425971 KCNMB2Q9Y691 235 aa10.27□□□□□ -0.77
HMGB1P32-201ENST00000425971 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.26□□□□□ -0.77
HMGB1P32-201ENST00000425971 SAMD5Q5TGI4 173 aa10.26□□□□□ -0.77
HMGB1P32-201ENST00000425971 XKR5Q6UX68 686 aa10.26□□□□□ -0.77
HMGB1P32-201ENST00000425971 RUBCNLQ9H714 662 aa10.26□□□□□ -0.77
HMGB1P32-201ENST00000425971 PARP2Q9UGN5 583 aa10.26□□□□□ -0.77
HMGB1P32-201ENST00000425971 EIF1AYO14602 144 aaKnown RBP10.25□□□□□ -0.77
HMGB1P32-201ENST00000425971 TMC4Q7Z404 712 aa10.25□□□□□ -0.77
HMGB1P32-201ENST00000425971 NLRP8Q86W28 1048 aa10.25□□□□□ -0.77
HMGB1P32-201ENST00000425971 FBF1Q8TES7 1133 aa10.25□□□□□ -0.77
HMGB1P32-201ENST00000425971 BCL11AQ9H165 835 aa10.25□□□□□ -0.77
HMGB1P32-201ENST00000425971 DNAJC25Q9H1X3 360 aa10.25□□□□□ -0.77
HMGB1P32-201ENST00000425971 ATP13A2Q9NQ11 1180 aa10.25□□□□□ -0.77
HMGB1P32-201ENST00000425971 AAASQ9NRG9 546 aa10.25□□□□□ -0.77
HMGB1P32-201ENST00000425971 RNF19AQ9NV58 838 aa10.25□□□□□ -0.77
HMGB1P32-201ENST00000425971 TCF3P15923 654 aa10.24□□□□□ -0.77
HMGB1P32-201ENST00000425971 DAB2P98082 770 aa10.24□□□□□ -0.77
HMGB1P32-201ENST00000425971 ALG1LQ6GMV1 187 aa10.24□□□□□ -0.77
HMGB1P32-201ENST00000425971 TTC16Q8NEE8 873 aa10.24□□□□□ -0.77
HMGB1P32-201ENST00000425971 CEP63Q96MT8 703 aa10.24□□□□□ -0.77
HMGB1P32-201ENST00000425971 FNDC3AQ9Y2H6 1198 aaKnown RBP10.24□□□□□ -0.77
HMGB1P32-201ENST00000425971 SMARCA4P51532 1647 aa10.23□□□□□ -0.77
HMGB1P32-201ENST00000425971 ST8SIA5O15466 376 aa10.23□□□□□ -0.77
HMGB1P32-201ENST00000425971 NEFLP07196 543 aa10.23□□□□□ -0.77
HMGB1P32-201ENST00000425971 EPB42P16452 691 aa10.23□□□□□ -0.77
HMGB1P32-201ENST00000425971 XPCQ01831 940 aaPredicted RBP10.23□□□□□ -0.77
HMGB1P32-201ENST00000425971 LBRQ14739 615 aaKnown RBP10.23□□□□□ -0.77
HMGB1P32-201ENST00000425971 PDE12Q6L8Q7 609 aaKnown RBP10.23□□□□□ -0.77
HMGB1P32-201ENST00000425971 CMTR1Q8N1G2 835 aaKnown RBP10.23□□□□□ -0.77
HMGB1P32-201ENST00000425971 GJA3Q9Y6H8 435 aa10.23□□□□□ -0.77
HMGB1P32-201ENST00000425971 UBAP1LF5GYI3 381 aa10.22□□□□□ -0.77
HMGB1P32-201ENST00000425971 TNFRSF21O75509 655 aa10.22□□□□□ -0.77
HMGB1P32-201ENST00000425971 SNX29Q8TEQ0 813 aa10.22□□□□□ -0.77
HMGB1P32-201ENST00000425971 GAS2L1Q99501 681 aaPredicted RBP10.22□□□□□ -0.77
HMGB1P32-201ENST00000425971 C11orf16Q9NQ32 467 aa10.22□□□□□ -0.77
HMGB1P32-201ENST00000425971 EGFRP00533 1210 aa10.21□□□□□ -0.77
HMGB1P32-201ENST00000425971 THBS1P07996 1170 aa10.21□□□□□ -0.77
HMGB1P32-201ENST00000425971 LDLRAD1Q5T700 205 aa10.21□□□□□ -0.77
HMGB1P32-201ENST00000425971 PGBD3Q8N328 593 aa10.21□□□□□ -0.77
HMGB1P32-201ENST00000425971 FAM161BQ96MY7 647 aa10.21□□□□□ -0.77
HMGB1P32-201ENST00000425971 FOXD3Q9UJU5 478 aaPredicted RBP10.21□□□□□ -0.77
HMGB1P32-201ENST00000425971 MAN1A2O60476 641 aa10.2□□□□□ -0.78
HMGB1P32-201ENST00000425971 CPNE3O75131 537 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms