RNA–Protein interactions for RNA: ENST00000423898.1

SMIM12-202, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-202ENST00000423898 DDX21Q9NR30 783 aaKnown RBP eCLIP27.51■■□□□ 1.99
SMIM12-202ENST00000423898 HDGFL1Q5TGJ6 251 aa27.5■■□□□ 1.99
SMIM12-202ENST00000423898 RTKN2Q8IZC4 609 aa27.5■■□□□ 1.99
SMIM12-202ENST00000423898 SMC1BQ8NDV3 1235 aa27.5■■□□□ 1.99
SMIM12-202ENST00000423898 CFAP44Q96MT7 982 aa27.5■■□□□ 1.99
SMIM12-202ENST00000423898 ZNF277Q9NRM2 450 aaPredicted RBP27.5■■□□□ 1.99
SMIM12-202ENST00000423898 CHPF2Q9P2E5 772 aa27.5■■□□□ 1.99
SMIM12-202ENST00000423898 UTP14AQ9BVJ6 771 aaKnown RBP27.49■■□□□ 1.99
SMIM12-202ENST00000423898 MBIPQ9NS73 344 aa27.48■■□□□ 1.99
SMIM12-202ENST00000423898 HOXB7P09629 217 aa27.47■■□□□ 1.99
SMIM12-202ENST00000423898 HSP90AB3PQ58FF7 597 aa27.47■■□□□ 1.99
SMIM12-202ENST00000423898 RBM17Q96I25 401 aaKnown RBP27.47■■□□□ 1.99
SMIM12-202ENST00000423898 POTECB2RU33 542 aa27.46■■□□□ 1.99
SMIM12-202ENST00000423898 DDNO94850 711 aaPredicted RBP27.46■■□□□ 1.99
SMIM12-202ENST00000423898 C3orf67Q6ZVT6 689 aa27.46■■□□□ 1.99
SMIM12-202ENST00000423898 HOXA10P31260 410 aaPredicted RBP27.45■■□□□ 1.98
SMIM12-202ENST00000423898 DUSP27Q5VZP5 1158 aa27.45■■□□□ 1.98
SMIM12-202ENST00000423898 LAMB2P55268 1798 aa27.45■■□□□ 1.98
SMIM12-202ENST00000423898 SYNE4Q8N205 404 aa27.44■■□□□ 1.98
SMIM12-202ENST00000423898 NLRP3Q96P20 1036 aa27.44■■□□□ 1.98
SMIM12-202ENST00000423898 HTRA3P83110 453 aa27.43■■□□□ 1.98
SMIM12-202ENST00000423898 CALD1Q05682 793 aaKnown RBP27.43■■□□□ 1.98
SMIM12-202ENST00000423898 TCIRG1Q13488 830 aa27.43■■□□□ 1.98
SMIM12-202ENST00000423898 NLRP10Q86W26 655 aa27.43■■□□□ 1.98
SMIM12-202ENST00000423898 DBF4Q9UBU7 674 aaPredicted RBP27.43■■□□□ 1.98
SMIM12-202ENST00000423898 TCERG1O14776 1098 aaKnown RBP27.42■■□□□ 1.98
SMIM12-202ENST00000423898 PPEF1O14829 653 aaPredicted RBP27.42■■□□□ 1.98
SMIM12-202ENST00000423898 ZNF853P0CG23 659 aa27.42■■□□□ 1.98
SMIM12-202ENST00000423898 IARSP41252 1262 aaKnown RBP27.42■■□□□ 1.98
SMIM12-202ENST00000423898 CCDC184Q52MB2 194 aa27.42■■□□□ 1.98
SMIM12-202ENST00000423898 CRAMP1Q96RY5 1269 aa27.42■■□□□ 1.98
SMIM12-202ENST00000423898 IFT57Q9NWB7 429 aa27.42■■□□□ 1.98
SMIM12-202ENST00000423898 RNF123Q5XPI4 1314 aa27.41■■□□□ 1.98
SMIM12-202ENST00000423898 SNED1Q8TER0 1413 aa27.41■■□□□ 1.98
SMIM12-202ENST00000423898 GNAI1P63096 354 aa27.41■■□□□ 1.98
SMIM12-202ENST00000423898 CC2D2BQ6DHV5 1058 aa27.41■■□□□ 1.98
SMIM12-202ENST00000423898 ZNF428Q96B54 188 aa27.41■■□□□ 1.98
SMIM12-202ENST00000423898 TRMT112Q9UI30 125 aaKnown RBP27.41■■□□□ 1.98
SMIM12-202ENST00000423898 SLC10A5Q5PT55 438 aa27.4■■□□□ 1.98
SMIM12-202ENST00000423898 PSMD1Q99460 953 aa27.4■■□□□ 1.98
SMIM12-202ENST00000423898 ZNF541Q9H0D2 1346 aa27.4■■□□□ 1.98
SMIM12-202ENST00000423898 HCLS1P14317 486 aaPredicted RBP27.39■■□□□ 1.98
SMIM12-202ENST00000423898 SLC51AQ86UW1 340 aa27.39■■□□□ 1.98
SMIM12-202ENST00000423898 PLBD2Q8NHP8 589 aa27.39■■□□□ 1.98
SMIM12-202ENST00000423898 SCN4AP35499 1836 aa27.39■■□□□ 1.97
SMIM12-202ENST00000423898 ELL2O00472 640 aaPredicted RBP27.38■■□□□ 1.97
SMIM12-202ENST00000423898 ANKRD13DQ6ZTN6 518 aa27.38■■□□□ 1.97
SMIM12-202ENST00000423898 DNAJC5GQ8N7S2 189 aa27.38■■□□□ 1.97
SMIM12-202ENST00000423898 HYPKQ9NX55 129 aa27.38■■□□□ 1.97
SMIM12-202ENST00000423898 ABCC4O15439 1325 aa27.37■■□□□ 1.97
SMIM12-202ENST00000423898 SH3TC1Q8TE82 1336 aa27.37■■□□□ 1.97
SMIM12-202ENST00000423898 IQCA1LA6NCM1 817 aa27.36■■□□□ 1.97
SMIM12-202ENST00000423898 JDP2Q8WYK2 163 aa27.36■■□□□ 1.97
SMIM12-202ENST00000423898 GRIPAP1Q4V328 841 aa27.35■■□□□ 1.97
SMIM12-202ENST00000423898 L3MBTL3Q96JM7 780 aaPredicted RBP27.35■■□□□ 1.97
SMIM12-202ENST00000423898 TMX4Q9H1E5 349 aaPredicted RBP27.35■■□□□ 1.97
SMIM12-202ENST00000423898 DDX60Q8IY21 1712 aaKnown RBP27.35■■□□□ 1.97
SMIM12-202ENST00000423898 ZNF316A6NFI3 1004 aaPredicted RBP27.34■■□□□ 1.97
SMIM12-202ENST00000423898 ATP5J2-PTCD1G3V325 749 aa27.34■■□□□ 1.97
SMIM12-202ENST00000423898 COL4A5P29400 1685 aa27.33■■□□□ 1.97
SMIM12-202ENST00000423898 FZD9O00144 591 aa27.33■■□□□ 1.97
SMIM12-202ENST00000423898 POTEIP0CG38 1075 aa27.33■■□□□ 1.97
SMIM12-202ENST00000423898 POTEJP0CG39 1038 aa27.33■■□□□ 1.97
SMIM12-202ENST00000423898 TAF1P21675 1872 aa27.33■■□□□ 1.97
SMIM12-202ENST00000423898 C8orf58Q8NAV2 365 aa27.32■■□□□ 1.96
SMIM12-202ENST00000423898 ISCA1Q9BUE6 129 aa27.32■■□□□ 1.96
SMIM12-202ENST00000423898 ATP6V0A2Q9Y487 856 aa27.32■■□□□ 1.96
SMIM12-202ENST00000423898 ANP32CO43423 234 aa27.31■■□□□ 1.96
SMIM12-202ENST00000423898 GOLGA2Q08379 1002 aa27.31■■□□□ 1.96
SMIM12-202ENST00000423898 CHADLQ6NUI6 762 aa27.31■■□□□ 1.96
SMIM12-202ENST00000423898 DDX46Q7L014 1031 aaKnown RBP27.31■■□□□ 1.96
SMIM12-202ENST00000423898 LARGE2Q8N3Y3 721 aa27.31■■□□□ 1.96
SMIM12-202ENST00000423898 KLRG1Q96E93 195 aa27.31■■□□□ 1.96
SMIM12-202ENST00000423898 TAF1DQ9H5J8 278 aaPredicted RBP27.31■■□□□ 1.96
SMIM12-202ENST00000423898 MRS2Q9HD23 443 aa27.31■■□□□ 1.96
SMIM12-202ENST00000423898 RIC3Q7Z5B4 369 aa27.3■■□□□ 1.96
SMIM12-202ENST00000423898 PHAXQ9H814 394 aaKnown RBP27.3■■□□□ 1.96
SMIM12-202ENST00000423898 EIF6P56537 245 aaKnown RBP27.29■■□□□ 1.96
SMIM12-202ENST00000423898 FAM89AQ96GI7 184 aa27.29■■□□□ 1.96
SMIM12-202ENST00000423898 HACL1Q9UJ83 578 aa27.29■■□□□ 1.96
SMIM12-202ENST00000423898 BBOX1O75936 387 aa27.28■■□□□ 1.96
SMIM12-202ENST00000423898 EAPPQ56P03 285 aaPredicted RBP27.28■■□□□ 1.96
SMIM12-202ENST00000423898 RTL5Q5HYW3 569 aaPredicted RBP27.28■■□□□ 1.96
SMIM12-202ENST00000423898 GPC2Q8N158 579 aa27.28■■□□□ 1.96
SMIM12-202ENST00000423898 GJA3Q9Y6H8 435 aa27.28■■□□□ 1.96
SMIM12-202ENST00000423898 PPIP5K2O43314 1243 aa27.27■■□□□ 1.96
SMIM12-202ENST00000423898 GRAPQ13588 217 aa27.27■■□□□ 1.96
SMIM12-202ENST00000423898 LDHDQ86WU2 507 aa27.27■■□□□ 1.96
SMIM12-202ENST00000423898 GRAPLQ8TC17 118 aaPredicted RBP27.27■■□□□ 1.96
SMIM12-202ENST00000423898 TSR2Q969E8 191 aaKnown RBP27.27■■□□□ 1.96
SMIM12-202ENST00000423898 AOC3Q16853 763 aa27.26■■□□□ 1.95
SMIM12-202ENST00000423898 NIM1KQ8IY84 436 aa27.26■■□□□ 1.95
SMIM12-202ENST00000423898 EPHX2P34913 555 aa27.25■■□□□ 1.95
SMIM12-202ENST00000423898 CCDC30Q5VVM6 783 aa27.25■■□□□ 1.95
SMIM12-202ENST00000423898 DPP8Q6V1X1 898 aaPredicted RBP27.25■■□□□ 1.95
SMIM12-202ENST00000423898 SP8Q8IXZ3 490 aa27.25■■□□□ 1.95
SMIM12-202ENST00000423898 TSPYL6Q8N831 410 aa27.25■■□□□ 1.95
SMIM12-202ENST00000423898 CCDC27Q2M243 656 aa27.24■■□□□ 1.95
SMIM12-202ENST00000423898 WWC1Q8IX03 1113 aa27.24■■□□□ 1.95
SMIM12-202ENST00000423898 SUPT20HQ8NEM7 779 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms