RNA–Protein interactions for RNA: ENST00000423239.6

RC3H2-205, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 5 BASIC

Gene RC3H2, Length 3,623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-205ENST00000423239 DDX46Q7L014 1031 aaKnown RBP16.49■□□□□ 0.23
RC3H2-205ENST00000423239 ZNF594Q96JF6 807 aaPredicted RBP16.49■□□□□ 0.23
RC3H2-205ENST00000423239 ERVV-2B6SEH9 535 aa16.49■□□□□ 0.23
RC3H2-205ENST00000423239 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
RC3H2-205ENST00000423239 DBNDD2Q9BQY9 259 aa16.49■□□□□ 0.23
RC3H2-205ENST00000423239 LSG1Q9H089 658 aaKnown RBP16.49■□□□□ 0.23
RC3H2-205ENST00000423239 NUTM2BA6NNL0 878 aaPredicted RBP16.49■□□□□ 0.23
RC3H2-205ENST00000423239 NUTM2EB1AL46 878 aaPredicted RBP16.49■□□□□ 0.23
RC3H2-205ENST00000423239 AK2P54819 239 aa16.49■□□□□ 0.23
RC3H2-205ENST00000423239 NUTM2AQ8IVF1 878 aaPredicted RBP16.49■□□□□ 0.23
RC3H2-205ENST00000423239 RBM8AQ9Y5S9 174 aaKnown RBP16.49■□□□□ 0.23
RC3H2-205ENST00000423239 TIMM10P62072 90 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 DNAJC10Q8IXB1 793 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 GDPD2Q9HCC8 539 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 ASAP1Q9ULH1 1129 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 CACNA1FO60840 1977 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 MRE11P49959 708 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 RNF20Q5VTR2 975 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 GRPEL1Q9HAV7 217 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 DCCP43146 1447 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 RGPD5Q99666 1765 aa16.48■□□□□ 0.23
RC3H2-205ENST00000423239 CCDC57Q2TAC2 916 aa16.47■□□□□ 0.23
RC3H2-205ENST00000423239 TRIM44Q96DX7 344 aaPredicted RBP16.47■□□□□ 0.23
RC3H2-205ENST00000423239 TNNI3KQ59H18 835 aa16.47■□□□□ 0.23
RC3H2-205ENST00000423239 FPGT-TNNI3KV9GXZ4 949 aa16.47■□□□□ 0.23
RC3H2-205ENST00000423239 KIF1AQ12756 1690 aa16.47■□□□□ 0.23
RC3H2-205ENST00000423239 OVOS2A0A0G2JMS6 1433 aa16.47■□□□□ 0.23
RC3H2-205ENST00000423239 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
RC3H2-205ENST00000423239 STARD3NLO95772 234 aa16.46■□□□□ 0.23
RC3H2-205ENST00000423239 LIMCH1Q9UPQ0 1083 aa16.46■□□□□ 0.23
RC3H2-205ENST00000423239 VPS37CA5D8V6 355 aaPredicted RBP16.46■□□□□ 0.23
RC3H2-205ENST00000423239 KDM4FA0A1W2PPD8 638 aa16.46■□□□□ 0.23
RC3H2-205ENST00000423239 STK3Q13188 491 aa16.46■□□□□ 0.23
RC3H2-205ENST00000423239 FAM89AQ96GI7 184 aa16.46■□□□□ 0.23
RC3H2-205ENST00000423239 A0A0D9SFI3 127 aa16.45■□□□□ 0.22
RC3H2-205ENST00000423239 GOLIM4O00461 696 aa16.45■□□□□ 0.22
RC3H2-205ENST00000423239 EXOC5O00471 708 aa16.45■□□□□ 0.22
RC3H2-205ENST00000423239 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
RC3H2-205ENST00000423239 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
RC3H2-205ENST00000423239 DBNLQ9UJU6 430 aaKnown RBP16.45■□□□□ 0.22
RC3H2-205ENST00000423239 SOS2Q07890 1332 aaPredicted RBP16.45■□□□□ 0.22
RC3H2-205ENST00000423239 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
RC3H2-205ENST00000423239 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
RC3H2-205ENST00000423239 COPRSQ9NQ92 184 aa16.45■□□□□ 0.22
RC3H2-205ENST00000423239 CEP126Q9P2H0 1117 aa16.45■□□□□ 0.22
RC3H2-205ENST00000423239 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.45■□□□□ 0.22
RC3H2-205ENST00000423239 CCDC171Q6TFL3 1326 aa16.45■□□□□ 0.22
RC3H2-205ENST00000423239 NECAB1Q8N987 351 aa16.45■□□□□ 0.22
RC3H2-205ENST00000423239 SNRKQ9NRH2 765 aa16.44■□□□□ 0.22
RC3H2-205ENST00000423239 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
RC3H2-205ENST00000423239 CPDO75976 1380 aa16.44■□□□□ 0.22
RC3H2-205ENST00000423239 CREB3L3Q68CJ9 461 aa16.44■□□□□ 0.22
RC3H2-205ENST00000423239 BLOC1S2Q6QNY1 142 aa16.44■□□□□ 0.22
RC3H2-205ENST00000423239 AK9Q5TCS8 1911 aa16.44■□□□□ 0.22
RC3H2-205ENST00000423239 PSMA5P28066 241 aa16.44■□□□□ 0.22
RC3H2-205ENST00000423239 CCDC129Q6ZRS4 1044 aa16.44■□□□□ 0.22
RC3H2-205ENST00000423239 UTYO14607 1347 aa16.44■□□□□ 0.22
RC3H2-205ENST00000423239 KLHL40Q2TBA0 621 aa16.43■□□□□ 0.22
RC3H2-205ENST00000423239 PIP4K2BP78356 416 aa16.43■□□□□ 0.22
RC3H2-205ENST00000423239 PIGBQ92521 554 aa16.43■□□□□ 0.22
RC3H2-205ENST00000423239 ZDHHC9Q9Y397 364 aa16.43■□□□□ 0.22
RC3H2-205ENST00000423239 USP54Q70EL1 1684 aa16.43■□□□□ 0.22
RC3H2-205ENST00000423239 LMO7Q8WWI1 1683 aa16.43■□□□□ 0.22
RC3H2-205ENST00000423239 LRRC24Q50LG9 513 aa16.42■□□□□ 0.22
RC3H2-205ENST00000423239 SEC62Q99442 399 aaKnown RBP16.42■□□□□ 0.22
RC3H2-205ENST00000423239 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
RC3H2-205ENST00000423239 CHGBP05060 677 aa16.42■□□□□ 0.22
RC3H2-205ENST00000423239 IFIT1P09914 478 aaKnown RBP16.42■□□□□ 0.22
RC3H2-205ENST00000423239 GAS2L3Q86XJ1 694 aa16.42■□□□□ 0.22
RC3H2-205ENST00000423239 CCDC191Q8NCU4 936 aa16.42■□□□□ 0.22
RC3H2-205ENST00000423239 ACSBG1Q96GR2 724 aa16.42■□□□□ 0.22
RC3H2-205ENST00000423239 LMBRD1Q9NUN5 540 aa16.42■□□□□ 0.22
RC3H2-205ENST00000423239 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
RC3H2-205ENST00000423239 WASHC4Q2M389 1173 aa16.41■□□□□ 0.22
RC3H2-205ENST00000423239 INTS4Q96HW7 963 aaKnown RBP16.41■□□□□ 0.22
RC3H2-205ENST00000423239 PUS3Q9BZE2 481 aaKnown RBP16.41■□□□□ 0.22
RC3H2-205ENST00000423239 TRPM3Q9HCF6 1732 aaPredicted RBP16.41■□□□□ 0.22
RC3H2-205ENST00000423239 RUFY3Q7L099 469 aa16.41■□□□□ 0.22
RC3H2-205ENST00000423239 ZNF589Q86UQ0 364 aaPredicted RBP16.4■□□□□ 0.22
RC3H2-205ENST00000423239 KDM3BQ7LBC6 1761 aa16.4■□□□□ 0.22
RC3H2-205ENST00000423239 FIBPO43427 364 aa16.4■□□□□ 0.22
RC3H2-205ENST00000423239 USP42Q9H9J4 1324 aaKnown RBP16.4■□□□□ 0.22
RC3H2-205ENST00000423239 IL15P40933 162 aaPredicted RBP16.4■□□□□ 0.22
RC3H2-205ENST00000423239 CUL4AQ13619 759 aa16.4■□□□□ 0.22
RC3H2-205ENST00000423239 TTC39AQ5SRH9 613 aa16.4■□□□□ 0.22
RC3H2-205ENST00000423239 CNNM1Q9NRU3 951 aa16.4■□□□□ 0.22
RC3H2-205ENST00000423239 CAMTA1Q9Y6Y1 1673 aa16.4■□□□□ 0.22
RC3H2-205ENST00000423239 H7C1W4 665 aa16.39■□□□□ 0.21
RC3H2-205ENST00000423239 SLC27A2O14975 620 aa16.39■□□□□ 0.21
RC3H2-205ENST00000423239 ATP5JP18859 108 aa16.39■□□□□ 0.21
RC3H2-205ENST00000423239 IFIT5Q13325 482 aaKnown RBP16.39■□□□□ 0.21
RC3H2-205ENST00000423239 GJB2P29033 226 aa16.39■□□□□ 0.21
RC3H2-205ENST00000423239 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
RC3H2-205ENST00000423239 CCDC158Q5M9N0 1113 aa16.39■□□□□ 0.21
RC3H2-205ENST00000423239 LRP10Q7Z4F1 713 aa16.39■□□□□ 0.21
RC3H2-205ENST00000423239 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
RC3H2-205ENST00000423239 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
RC3H2-205ENST00000423239 ERBB4Q15303 1308 aa16.39■□□□□ 0.21
RC3H2-205ENST00000423239 EYA2O00167 538 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms