RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 GPTP24298 496 aa19.04■□□□□ 0.64
FAM3A-209ENST00000421517 ERFEQ4G0M1 354 aa19.04■□□□□ 0.64
FAM3A-209ENST00000421517 WWC3Q9ULE0 1092 aa19.04■□□□□ 0.64
FAM3A-209ENST00000421517 CC2D2BQ6DHV5 1058 aa19.03■□□□□ 0.64
FAM3A-209ENST00000421517 CCDC24Q8N4L8 307 aa19.03■□□□□ 0.64
FAM3A-209ENST00000421517 C7orf43Q8WVR3 580 aa19.03■□□□□ 0.64
FAM3A-209ENST00000421517 NLRP3Q96P20 1036 aa19.03■□□□□ 0.64
FAM3A-209ENST00000421517 ABCC12Q96J65 1359 aa19.03■□□□□ 0.64
FAM3A-209ENST00000421517 VAMP4O75379 141 aa19.02■□□□□ 0.64
FAM3A-209ENST00000421517 HSP90B1P14625 803 aaKnown RBP19.02■□□□□ 0.64
FAM3A-209ENST00000421517 PRPF40BQ6NWY9 871 aaKnown RBP19.02■□□□□ 0.64
FAM3A-209ENST00000421517 NUTM1Q86Y26 1132 aa19.02■□□□□ 0.64
FAM3A-209ENST00000421517 CRAMP1Q96RY5 1269 aa19.02■□□□□ 0.64
FAM3A-209ENST00000421517 PHAXQ9H814 394 aaKnown RBP19.02■□□□□ 0.64
FAM3A-209ENST00000421517 SH3TC1Q8TE82 1336 aa19.01■□□□□ 0.63
FAM3A-209ENST00000421517 LMNB1P20700 586 aa19.01■□□□□ 0.63
FAM3A-209ENST00000421517 RIC3Q7Z5B4 369 aa19.01■□□□□ 0.63
FAM3A-209ENST00000421517 FAM177BA6PVY3 158 aa19■□□□□ 0.63
FAM3A-209ENST00000421517 E9PSI1 815 aa19■□□□□ 0.63
FAM3A-209ENST00000421517 DIEXFQ68CQ4 756 aaKnown RBP19■□□□□ 0.63
FAM3A-209ENST00000421517 KSR2Q6VAB6 950 aa19■□□□□ 0.63
FAM3A-209ENST00000421517 CCDC191Q8NCU4 936 aa19■□□□□ 0.63
FAM3A-209ENST00000421517 METTL22Q9BUU2 404 aaPredicted RBP19■□□□□ 0.63
FAM3A-209ENST00000421517 TRMT112Q9UI30 125 aaKnown RBP19■□□□□ 0.63
FAM3A-209ENST00000421517 RTKN2Q8IZC4 609 aa18.99■□□□□ 0.63
FAM3A-209ENST00000421517 RPGRQ92834 1020 aaKnown RBP18.99■□□□□ 0.63
FAM3A-209ENST00000421517 ZNF428Q96B54 188 aa18.99■□□□□ 0.63
FAM3A-209ENST00000421517 RBM17Q96I25 401 aaKnown RBP18.99■□□□□ 0.63
FAM3A-209ENST00000421517 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
FAM3A-209ENST00000421517 SALL2Q9Y467 1007 aaPredicted RBP18.99■□□□□ 0.63
FAM3A-209ENST00000421517 NFKBIEO00221 500 aa18.98■□□□□ 0.63
FAM3A-209ENST00000421517 C21orf2O43822 256 aa18.98■□□□□ 0.63
FAM3A-209ENST00000421517 SLC4A2P04920 1241 aa18.98■□□□□ 0.63
FAM3A-209ENST00000421517 EXOSC9Q06265 439 aaKnown RBP18.98■□□□□ 0.63
FAM3A-209ENST00000421517 CCDC93Q567U6 631 aa18.98■□□□□ 0.63
FAM3A-209ENST00000421517 C9orf131Q5VYM1 1079 aa18.98■□□□□ 0.63
FAM3A-209ENST00000421517 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
FAM3A-209ENST00000421517 CACNA1FO60840 1977 aa18.97■□□□□ 0.63
FAM3A-209ENST00000421517 ZBTB38Q8NAP3 1195 aaPredicted RBP18.97■□□□□ 0.63
FAM3A-209ENST00000421517 FER1L6Q2WGJ9 1857 aa18.97■□□□□ 0.63
FAM3A-209ENST00000421517 SF3B3Q15393 1217 aaKnown RBP18.96■□□□□ 0.63
FAM3A-209ENST00000421517 TMC4Q7Z404 712 aa18.96■□□□□ 0.63
FAM3A-209ENST00000421517 TAOK3Q9H2K8 898 aa18.96■□□□□ 0.63
FAM3A-209ENST00000421517 SLX4Q8IY92 1834 aa18.95■□□□□ 0.62
FAM3A-209ENST00000421517 SBF1O95248 1867 aa18.95■□□□□ 0.62
FAM3A-209ENST00000421517 SNED1Q8TER0 1413 aa18.95■□□□□ 0.62
FAM3A-209ENST00000421517 BBOX1O75936 387 aa18.95■□□□□ 0.62
FAM3A-209ENST00000421517 FLIIQ13045 1269 aa18.95■□□□□ 0.62
FAM3A-209ENST00000421517 PSMD1Q99460 953 aa18.95■□□□□ 0.62
FAM3A-209ENST00000421517 GPBP1L1Q9HC44 474 aaPredicted RBP18.95■□□□□ 0.62
FAM3A-209ENST00000421517 RNF181Q9P0P0 153 aa18.95■□□□□ 0.62
FAM3A-209ENST00000421517 PI4KAP2A4QPH2 592 aa18.94■□□□□ 0.62
FAM3A-209ENST00000421517 PCCAP05165 728 aaPredicted RBP18.94■□□□□ 0.62
FAM3A-209ENST00000421517 CT47B1P0C2W7 299 aaPredicted RBP18.94■□□□□ 0.62
FAM3A-209ENST00000421517 FKBP4Q02790 459 aaKnown RBP eCLIP18.94■□□□□ 0.62
FAM3A-209ENST00000421517 SLFN5Q08AF3 891 aa18.94■□□□□ 0.62
FAM3A-209ENST00000421517 NEXNQ0ZGT2 675 aa18.94■□□□□ 0.62
FAM3A-209ENST00000421517 TRMT2AQ8IZ69 625 aaKnown RBP18.94■□□□□ 0.62
FAM3A-209ENST00000421517 PI4KAP1Q8N8J0 262 aa18.94■□□□□ 0.62
FAM3A-209ENST00000421517 VPS33BQ9H267 617 aa18.94■□□□□ 0.62
FAM3A-209ENST00000421517 CWC25Q9NXE8 425 aaPredicted RBP18.94■□□□□ 0.62
FAM3A-209ENST00000421517 MAP3K2Q9Y2U5 619 aa18.94■□□□□ 0.62
FAM3A-209ENST00000421517 SENP3-EIF4A1A0A087X0R7 540 aa18.93■□□□□ 0.62
FAM3A-209ENST00000421517 ATP5J2-PTCD1G3V325 749 aa18.93■□□□□ 0.62
FAM3A-209ENST00000421517 MYD88Q99836 296 aa18.93■□□□□ 0.62
FAM3A-209ENST00000421517 CDHR2Q9BYE9 1310 aa18.93■□□□□ 0.62
FAM3A-209ENST00000421517 RASSF7Q02833 373 aa18.92■□□□□ 0.62
FAM3A-209ENST00000421517 FAM89AQ96GI7 184 aa18.92■□□□□ 0.62
FAM3A-209ENST00000421517 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
FAM3A-209ENST00000421517 PRELPP51888 382 aa18.91■□□□□ 0.62
FAM3A-209ENST00000421517 C3orf67Q6ZVT6 689 aa18.91■□□□□ 0.62
FAM3A-209ENST00000421517 DDX46Q7L014 1031 aaKnown RBP18.91■□□□□ 0.62
FAM3A-209ENST00000421517 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
FAM3A-209ENST00000421517 ATP6V0A2Q9Y487 856 aa18.91■□□□□ 0.62
FAM3A-209ENST00000421517 IRS4O14654 1257 aaPredicted RBP18.9■□□□□ 0.62
FAM3A-209ENST00000421517 PPEF1O14829 653 aaPredicted RBP18.9■□□□□ 0.62
FAM3A-209ENST00000421517 IGKV5-2P06315 115 aa18.9■□□□□ 0.62
FAM3A-209ENST00000421517 HCLS1P14317 486 aaPredicted RBP18.9■□□□□ 0.62
FAM3A-209ENST00000421517 GRAPQ13588 217 aa18.9■□□□□ 0.62
FAM3A-209ENST00000421517 G2E3Q7L622 706 aa18.9■□□□□ 0.62
FAM3A-209ENST00000421517 SP8Q8IXZ3 490 aa18.9■□□□□ 0.62
FAM3A-209ENST00000421517 GRAPLQ8TC17 118 aaPredicted RBP18.9■□□□□ 0.62
FAM3A-209ENST00000421517 ABCC4O15439 1325 aa18.9■□□□□ 0.62
FAM3A-209ENST00000421517 LAMB2P55268 1798 aa18.9■□□□□ 0.62
FAM3A-209ENST00000421517 GLTPD2A6NH11 291 aa18.89■□□□□ 0.61
FAM3A-209ENST00000421517 FKBP5Q13451 457 aaPredicted RBP18.89■□□□□ 0.61
FAM3A-209ENST00000421517 SYNE4Q8N205 404 aa18.89■□□□□ 0.61
FAM3A-209ENST00000421517 LINS1Q8NG48 757 aa18.89■□□□□ 0.61
FAM3A-209ENST00000421517 DNAAF4Q8WXU2 420 aa18.89■□□□□ 0.61
FAM3A-209ENST00000421517 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
FAM3A-209ENST00000421517 NEURL1BA8MQ27 555 aa18.88■□□□□ 0.61
FAM3A-209ENST00000421517 PDE8AO60658 829 aa18.88■□□□□ 0.61
FAM3A-209ENST00000421517 DPY19L2Q6NUT2 758 aa18.88■□□□□ 0.61
FAM3A-209ENST00000421517 MIER1Q8N108 512 aa18.88■□□□□ 0.61
FAM3A-209ENST00000421517 RTFDC1Q9BY42 306 aaPredicted RBP18.88■□□□□ 0.61
FAM3A-209ENST00000421517 DICER1Q9UPY3 1922 aaKnown RBP18.88■□□□□ 0.61
FAM3A-209ENST00000421517 H7C1W4 665 aa18.87■□□□□ 0.61
FAM3A-209ENST00000421517 ALDH1L2Q3SY69 923 aa18.87■□□□□ 0.61
FAM3A-209ENST00000421517 KIF3CO14782 793 aa18.86■□□□□ 0.61
FAM3A-209ENST00000421517 C1QTNF8P60827 252 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 335.4 ms