RNA–Protein interactions for RNA: ENST00000418897.5

DDX39B-204, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-204ENST00000418897 SNED1Q8TER0 1413 aa16.34■□□□□ 0.21
DDX39B-204ENST00000418897 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
DDX39B-204ENST00000418897 MTHFSDQ2M296 383 aaKnown RBP16.33■□□□□ 0.2
DDX39B-204ENST00000418897 GRIPAP1Q4V328 841 aa16.33■□□□□ 0.2
DDX39B-204ENST00000418897 TPTE2Q6XPS3 522 aa16.33■□□□□ 0.2
DDX39B-204ENST00000418897 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.2
DDX39B-204ENST00000418897 FAM155AB1AL88 458 aaPredicted RBP16.32■□□□□ 0.2
DDX39B-204ENST00000418897 ZNF157P51786 506 aaPredicted RBP16.32■□□□□ 0.2
DDX39B-204ENST00000418897 SLC51AQ86UW1 340 aa16.32■□□□□ 0.2
DDX39B-204ENST00000418897 NIM1KQ8IY84 436 aa16.32■□□□□ 0.2
DDX39B-204ENST00000418897 C2orf69Q8N8R5 385 aa16.32■□□□□ 0.2
DDX39B-204ENST00000418897 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
DDX39B-204ENST00000418897 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
DDX39B-204ENST00000418897 TTC5Q8N0Z6 440 aa16.31■□□□□ 0.2
DDX39B-204ENST00000418897 CSRNP1Q96S65 589 aa16.31■□□□□ 0.2
DDX39B-204ENST00000418897 UBR2Q8IWV8 1755 aa16.31■□□□□ 0.2
DDX39B-204ENST00000418897 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
DDX39B-204ENST00000418897 HMOX1P09601 288 aa16.29■□□□□ 0.2
DDX39B-204ENST00000418897 ZNF790Q6PG37 636 aa16.29■□□□□ 0.2
DDX39B-204ENST00000418897 FBXO46Q6PJ61 603 aaPredicted RBP16.29■□□□□ 0.2
DDX39B-204ENST00000418897 CLEC4GQ6UXB4 293 aa16.29■□□□□ 0.2
DDX39B-204ENST00000418897 DLK2Q6UY11 383 aa16.29■□□□□ 0.2
DDX39B-204ENST00000418897 USP48Q86UV5 1035 aa16.29■□□□□ 0.2
DDX39B-204ENST00000418897 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
DDX39B-204ENST00000418897 HIRAP54198 1017 aaPredicted RBP16.28■□□□□ 0.2
DDX39B-204ENST00000418897 IL17REQ8NFR9 667 aa16.28■□□□□ 0.2
DDX39B-204ENST00000418897 GBA2Q9HCG7 927 aaPredicted RBP16.28■□□□□ 0.2
DDX39B-204ENST00000418897 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
DDX39B-204ENST00000418897 KCNQ3O43525 872 aa16.27■□□□□ 0.2
DDX39B-204ENST00000418897 GTF2E1P29083 439 aaPredicted RBP16.27■□□□□ 0.2
DDX39B-204ENST00000418897 BCL2L13Q9BXK5 485 aa16.27■□□□□ 0.2
DDX39B-204ENST00000418897 USP16Q9Y5T5 823 aa16.27■□□□□ 0.2
DDX39B-204ENST00000418897 GMPSP49915 693 aaPredicted RBP16.26■□□□□ 0.19
DDX39B-204ENST00000418897 COLQQ9Y215 455 aaPredicted RBP16.26■□□□□ 0.19
DDX39B-204ENST00000418897 A0A0C4DFX4 3053 aa16.25■□□□□ 0.19
DDX39B-204ENST00000418897 CXCL9Q07325 125 aa16.25■□□□□ 0.19
DDX39B-204ENST00000418897 MORC1Q86VD1 984 aa16.25■□□□□ 0.19
DDX39B-204ENST00000418897 ZNF296Q8WUU4 475 aaPredicted RBP16.25■□□□□ 0.19
DDX39B-204ENST00000418897 POLR3GLQ9BT43 218 aa16.25■□□□□ 0.19
DDX39B-204ENST00000418897 TMX4Q9H1E5 349 aaPredicted RBP16.25■□□□□ 0.19
DDX39B-204ENST00000418897 VPS33BQ9H267 617 aa16.25■□□□□ 0.19
DDX39B-204ENST00000418897 ZNRF3Q9ULT6 936 aa16.25■□□□□ 0.19
DDX39B-204ENST00000418897 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.19
DDX39B-204ENST00000418897 BCORQ6W2J9 1755 aa16.24■□□□□ 0.19
DDX39B-204ENST00000418897 PRAMEF22A3QJZ6 481 aa16.24■□□□□ 0.19
DDX39B-204ENST00000418897 H7C1D1 291 aa16.24■□□□□ 0.19
DDX39B-204ENST00000418897 PPIP5K2O43314 1243 aa16.24■□□□□ 0.19
DDX39B-204ENST00000418897 SLC10A3P09131 477 aa16.24■□□□□ 0.19
DDX39B-204ENST00000418897 INTS3Q68E01 1043 aaKnown RBP16.24■□□□□ 0.19
DDX39B-204ENST00000418897 PANK3Q9H999 370 aa16.24■□□□□ 0.19
DDX39B-204ENST00000418897 NPC1L1Q9UHC9 1359 aa16.24■□□□□ 0.19
DDX39B-204ENST00000418897 CDHR2Q9BYE9 1310 aa16.23■□□□□ 0.19
DDX39B-204ENST00000418897 TNIP1Q15025 636 aa16.23■□□□□ 0.19
DDX39B-204ENST00000418897 CRY2Q49AN0 593 aa16.23■□□□□ 0.19
DDX39B-204ENST00000418897 FMNL2Q96PY5 1086 aa16.23■□□□□ 0.19
DDX39B-204ENST00000418897 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
DDX39B-204ENST00000418897 HLFQ16534 295 aa16.22■□□□□ 0.19
DDX39B-204ENST00000418897 MKI67P46013 3256 aaKnown RBP16.21■□□□□ 0.19
DDX39B-204ENST00000418897 SHTN1A0MZ66 631 aa16.21■□□□□ 0.19
DDX39B-204ENST00000418897 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
DDX39B-204ENST00000418897 KRT26Q7Z3Y9 468 aa16.21■□□□□ 0.19
DDX39B-204ENST00000418897 TRPM4Q8TD43 1214 aa16.21■□□□□ 0.19
DDX39B-204ENST00000418897 RPGRQ92834 1020 aaKnown RBP16.21■□□□□ 0.19
DDX39B-204ENST00000418897 CNOT7Q9UIV1 285 aaKnown RBP16.21■□□□□ 0.19
DDX39B-204ENST00000418897 NBPF26B4DH59 902 aa16.2■□□□□ 0.18
DDX39B-204ENST00000418897 HOXA10P31260 410 aaPredicted RBP16.2■□□□□ 0.18
DDX39B-204ENST00000418897 TEFQ10587 303 aa16.2■□□□□ 0.18
DDX39B-204ENST00000418897 AOC3Q16853 763 aa16.2■□□□□ 0.18
DDX39B-204ENST00000418897 NBPF10Q6P3W6 841 aaKnown RBP16.2■□□□□ 0.18
DDX39B-204ENST00000418897 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
DDX39B-204ENST00000418897 SUPT20HQ8NEM7 779 aa16.19■□□□□ 0.18
DDX39B-204ENST00000418897 DCPSQ96C86 337 aaKnown RBP16.19■□□□□ 0.18
DDX39B-204ENST00000418897 ABCC12Q96J65 1359 aa16.18■□□□□ 0.18
DDX39B-204ENST00000418897 POTEFA5A3E0 1075 aa16.18■□□□□ 0.18
DDX39B-204ENST00000418897 GPR25O00155 361 aa16.18■□□□□ 0.18
DDX39B-204ENST00000418897 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
DDX39B-204ENST00000418897 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
DDX39B-204ENST00000418897 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
DDX39B-204ENST00000418897 RGL2O15211 777 aa16.16■□□□□ 0.18
DDX39B-204ENST00000418897 FKTNO75072 461 aa16.16■□□□□ 0.18
DDX39B-204ENST00000418897 RAD17O75943 681 aa16.16■□□□□ 0.18
DDX39B-204ENST00000418897 C3orf67Q6ZVT6 689 aa16.16■□□□□ 0.18
DDX39B-204ENST00000418897 NYXQ9GZU5 481 aa16.16■□□□□ 0.18
DDX39B-204ENST00000418897 SZT2Q5T011 3432 aa16.16■□□□□ 0.18
DDX39B-204ENST00000418897 AKAP11Q9UKA4 1901 aa16.15■□□□□ 0.18
DDX39B-204ENST00000418897 GNAT3A8MTJ3 354 aa16.15■□□□□ 0.18
DDX39B-204ENST00000418897 MICALL2Q8IY33 904 aa16.15■□□□□ 0.18
DDX39B-204ENST00000418897 CRAMP1Q96RY5 1269 aa16.15■□□□□ 0.18
DDX39B-204ENST00000418897 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
DDX39B-204ENST00000418897 MNX1P50219 401 aaPredicted RBP16.14■□□□□ 0.17
DDX39B-204ENST00000418897 RASAL3Q86YV0 1011 aa16.14■□□□□ 0.17
DDX39B-204ENST00000418897 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
DDX39B-204ENST00000418897 SIPA1L3O60292 1781 aaPredicted RBP16.13■□□□□ 0.17
DDX39B-204ENST00000418897 ADM5C9JUS6 153 aa16.13■□□□□ 0.17
DDX39B-204ENST00000418897 EGFRP00533 1210 aa16.13■□□□□ 0.17
DDX39B-204ENST00000418897 SAMD7Q7Z3H4 446 aa16.13■□□□□ 0.17
DDX39B-204ENST00000418897 SULF1Q8IWU6 871 aa16.13■□□□□ 0.17
DDX39B-204ENST00000418897 DPF2Q92785 391 aa16.13■□□□□ 0.17
DDX39B-204ENST00000418897 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
DDX39B-204ENST00000418897 EN2P19622 333 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms