RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 CNBD1Q8NA66 436 aa9.26□□□□□ -0.93
COPS3-202ENST00000417352 RSPH6AQ9H0K4 717 aa9.26□□□□□ -0.93
COPS3-202ENST00000417352 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
COPS3-202ENST00000417352 MRC1P22897 1456 aa9.26□□□□□ -0.93
COPS3-202ENST00000417352 CEP350Q5VT06 3117 aa9.26□□□□□ -0.93
COPS3-202ENST00000417352 PRAMEF22A3QJZ6 481 aa9.25□□□□□ -0.93
COPS3-202ENST00000417352 SNRPA1P09661 255 aaKnown RBP9.25□□□□□ -0.93
COPS3-202ENST00000417352 IL6STP40189 918 aaPredicted RBP9.25□□□□□ -0.93
COPS3-202ENST00000417352 MMRN1Q13201 1228 aa9.25□□□□□ -0.93
COPS3-202ENST00000417352 SBF1O95248 1867 aa9.25□□□□□ -0.93
COPS3-202ENST00000417352 CARMIL3Q8ND23 1372 aa9.24□□□□□ -0.93
COPS3-202ENST00000417352 NPC1L1Q9UHC9 1359 aa9.24□□□□□ -0.93
COPS3-202ENST00000417352 ADAMTS7Q9UKP4 1686 aa9.24□□□□□ -0.93
COPS3-202ENST00000417352 COL3A1P02461 1466 aaPredicted RBP9.24□□□□□ -0.93
COPS3-202ENST00000417352 FAM205CA6NFA0 338 aa9.24□□□□□ -0.93
COPS3-202ENST00000417352 ERFEQ4G0M1 354 aa9.24□□□□□ -0.93
COPS3-202ENST00000417352 PRR5LQ6MZQ0 368 aa9.24□□□□□ -0.93
COPS3-202ENST00000417352 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
COPS3-202ENST00000417352 BRIP1Q9BX63 1249 aa9.24□□□□□ -0.93
COPS3-202ENST00000417352 ZNF652Q9Y2D9 606 aa9.24□□□□□ -0.93
COPS3-202ENST00000417352 UBR2Q8IWV8 1755 aa9.24□□□□□ -0.93
COPS3-202ENST00000417352 CACNA1SQ13698 1873 aa9.23□□□□□ -0.93
COPS3-202ENST00000417352 VEGFAP15692 232 aaPredicted RBP9.23□□□□□ -0.93
COPS3-202ENST00000417352 TAF7Q15545 349 aaPredicted RBP9.23□□□□□ -0.93
COPS3-202ENST00000417352 SMC1BQ8NDV3 1235 aa9.23□□□□□ -0.93
COPS3-202ENST00000417352 CNKSR1Q969H4 720 aa9.23□□□□□ -0.93
COPS3-202ENST00000417352 HS3ST6Q96QI5 342 aa9.23□□□□□ -0.93
COPS3-202ENST00000417352 RRP7AQ9Y3A4 280 aaKnown RBP9.23□□□□□ -0.93
COPS3-202ENST00000417352 POTEB3A0JP26 581 aa9.22□□□□□ -0.93
COPS3-202ENST00000417352 GLTPD2A6NH11 291 aa9.22□□□□□ -0.93
COPS3-202ENST00000417352 CAMTA2O94983 1202 aa9.22□□□□□ -0.93
COPS3-202ENST00000417352 HOXB3P14651 431 aaPredicted RBP9.22□□□□□ -0.93
COPS3-202ENST00000417352 FSTL1Q12841 308 aa9.22□□□□□ -0.93
COPS3-202ENST00000417352 IFFO2Q5TF58 517 aa9.22□□□□□ -0.93
COPS3-202ENST00000417352 POTEBQ6S5H4 581 aa9.22□□□□□ -0.93
COPS3-202ENST00000417352 TPTE2Q6XPS3 522 aa9.22□□□□□ -0.93
COPS3-202ENST00000417352 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
COPS3-202ENST00000417352 NIP7Q9Y221 180 aaKnown RBP eCLIP9.22□□□□□ -0.93
COPS3-202ENST00000417352 MAPK8IP3Q9UPT6 1336 aa9.22□□□□□ -0.93
COPS3-202ENST00000417352 SIPA1L3O60292 1781 aaPredicted RBP9.22□□□□□ -0.93
COPS3-202ENST00000417352 MYL6BP14649 208 aa9.21□□□□□ -0.94
COPS3-202ENST00000417352 PRPF40BQ6NWY9 871 aaKnown RBP9.21□□□□□ -0.94
COPS3-202ENST00000417352 MASTLQ96GX5 879 aa9.21□□□□□ -0.94
COPS3-202ENST00000417352 THUMPD2Q9BTF0 503 aaKnown RBP9.21□□□□□ -0.94
COPS3-202ENST00000417352 TAOK3Q9H2K8 898 aa9.21□□□□□ -0.94
COPS3-202ENST00000417352 CEMIPQ8WUJ3 1361 aa9.21□□□□□ -0.94
COPS3-202ENST00000417352 NFKBIEO00221 500 aa9.2□□□□□ -0.94
COPS3-202ENST00000417352 TCERG1O14776 1098 aaKnown RBP9.2□□□□□ -0.94
COPS3-202ENST00000417352 HTATSF1O43719 755 aaKnown RBP9.2□□□□□ -0.94
COPS3-202ENST00000417352 PRELPP51888 382 aa9.2□□□□□ -0.94
COPS3-202ENST00000417352 KIF6Q6ZMV9 814 aa9.2□□□□□ -0.94
COPS3-202ENST00000417352 PNNQ9H307 717 aaKnown RBP9.2□□□□□ -0.94
COPS3-202ENST00000417352 TNRC6CQ9HCJ0 1690 aaKnown RBP9.2□□□□□ -0.94
COPS3-202ENST00000417352 NRXN2Q9P2S2 1712 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 DLEC1Q9Y238 1755 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 ANKRD31Q8N7Z5 1873 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 RIOK3O14730 519 aaKnown RBP9.19□□□□□ -0.94
COPS3-202ENST00000417352 SRGNP10124 158 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 EIF2S2P20042 333 aaKnown RBP9.19□□□□□ -0.94
COPS3-202ENST00000417352 NEUROD2Q15784 382 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 SOGA3Q5TF21 947 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 STYK1Q6J9G0 422 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 CLEC4GQ6UXB4 293 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 DNAJC5GQ8N7S2 189 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 PNISRQ8TF01 805 aaKnown RBP9.19□□□□□ -0.94
COPS3-202ENST00000417352 SCN7AQ01118 1682 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 TIAM2Q8IVF5 1701 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 WDR90Q96KV7 1748 aa9.19□□□□□ -0.94
COPS3-202ENST00000417352 NBPF26B4DH59 902 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 DDNO94850 711 aaPredicted RBP9.18□□□□□ -0.94
COPS3-202ENST00000417352 NPR1P16066 1061 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 GPTP24298 496 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 HLFQ16534 295 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 EAPPQ56P03 285 aaPredicted RBP9.18□□□□□ -0.94
COPS3-202ENST00000417352 NBPF10Q6P3W6 841 aaKnown RBP9.18□□□□□ -0.94
COPS3-202ENST00000417352 NUTM1Q86Y26 1132 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 SLX4Q8IY92 1834 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 ZNF710Q8N1W2 664 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 NBPF15Q8N660 670 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 NECTIN2Q92692 538 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 RNF25Q96BH1 459 aaPredicted RBP9.18□□□□□ -0.94
COPS3-202ENST00000417352 KLRG1Q96E93 195 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 ZBTB3Q9H5J0 574 aa9.18□□□□□ -0.94
COPS3-202ENST00000417352 ZNF277Q9NRM2 450 aaPredicted RBP9.18□□□□□ -0.94
COPS3-202ENST00000417352 ZC3H4Q9UPT8 1303 aaKnown RBP9.18□□□□□ -0.94
COPS3-202ENST00000417352 LAS1LQ9Y4W2 734 aaKnown RBP9.18□□□□□ -0.94
COPS3-202ENST00000417352 DLG5Q8TDM6 1919 aa9.17□□□□□ -0.94
COPS3-202ENST00000417352 ALDH1B1P30837 517 aa9.17□□□□□ -0.94
COPS3-202ENST00000417352 RIPK4P57078 832 aa9.17□□□□□ -0.94
COPS3-202ENST00000417352 NFE2L2Q16236 605 aa9.17□□□□□ -0.94
COPS3-202ENST00000417352 DOK7Q18PE1 504 aa9.17□□□□□ -0.94
COPS3-202ENST00000417352 CCDC93Q567U6 631 aa9.17□□□□□ -0.94
COPS3-202ENST00000417352 OLFM4Q6UX06 510 aa9.17□□□□□ -0.94
COPS3-202ENST00000417352 RPGRQ92834 1020 aaKnown RBP9.17□□□□□ -0.94
COPS3-202ENST00000417352 KRTAP3-3Q9BYR6 98 aa9.17□□□□□ -0.94
COPS3-202ENST00000417352 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
COPS3-202ENST00000417352 TMX4Q9H1E5 349 aaPredicted RBP9.17□□□□□ -0.94
COPS3-202ENST00000417352 TSPYL4Q9UJ04 414 aa9.17□□□□□ -0.94
COPS3-202ENST00000417352 COL11A2P13942 1736 aaPredicted RBP9.17□□□□□ -0.94
COPS3-202ENST00000417352 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 297.3 ms