RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 A0A087WZG4 1122 aa14.9□□□□□ -0.02
UBA3-203ENST00000415609 CASTP20810 708 aaKnown RBP14.9□□□□□ -0.02
UBA3-203ENST00000415609 AK2P54819 239 aa14.9□□□□□ -0.02
UBA3-203ENST00000415609 PRPF40BQ6NWY9 871 aaKnown RBP14.9□□□□□ -0.02
UBA3-203ENST00000415609 TTC14Q96N46 770 aa14.9□□□□□ -0.02
UBA3-203ENST00000415609 FSD1Q9BTV5 496 aa14.9□□□□□ -0.02
UBA3-203ENST00000415609 CCDC171Q6TFL3 1326 aa14.89□□□□□ -0.03
UBA3-203ENST00000415609 NMIQ13287 307 aaPredicted RBP14.89□□□□□ -0.03
UBA3-203ENST00000415609 COPRSQ9NQ92 184 aa14.89□□□□□ -0.03
UBA3-203ENST00000415609 SOS2Q07890 1332 aaPredicted RBP14.89□□□□□ -0.03
UBA3-203ENST00000415609 KCNJ4P48050 445 aa14.88□□□□□ -0.03
UBA3-203ENST00000415609 FAM227BQ96M60 508 aa14.88□□□□□ -0.03
UBA3-203ENST00000415609 JAKMIP1Q96N16 626 aaKnown RBP14.88□□□□□ -0.03
UBA3-203ENST00000415609 SLAIN2Q9P270 581 aa14.88□□□□□ -0.03
UBA3-203ENST00000415609 ERBB4Q15303 1308 aa14.88□□□□□ -0.03
UBA3-203ENST00000415609 CPA1P15085 419 aa14.88□□□□□ -0.03
UBA3-203ENST00000415609 RFX5P48382 616 aaPredicted RBP14.88□□□□□ -0.03
UBA3-203ENST00000415609 LIMCH1Q9UPQ0 1083 aa14.88□□□□□ -0.03
UBA3-203ENST00000415609 NBPF26B4DH59 902 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 ERVV-2B6SEH9 535 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 IL2RBP14784 551 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 PTPN12Q05209 780 aaKnown RBP14.87□□□□□ -0.03
UBA3-203ENST00000415609 ZSCAN23Q3MJ62 389 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 RABL6Q3YEC7 729 aaPredicted RBP14.87□□□□□ -0.03
UBA3-203ENST00000415609 NBPF14Q5TI25 921 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 NBPF10Q6P3W6 841 aaKnown RBP14.87□□□□□ -0.03
UBA3-203ENST00000415609 RUFY3Q7L099 469 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 NBPF15Q8N660 670 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 GPT2Q8TD30 523 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 LARP6Q9BRS8 491 aaKnown RBP14.87□□□□□ -0.03
UBA3-203ENST00000415609 UBR2Q8IWV8 1755 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 COL15A1P39059 1388 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 ABCA3Q99758 1704 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 ZKSCAN1P17029 563 aaPredicted RBP14.87□□□□□ -0.03
UBA3-203ENST00000415609 TFCP2Q12800 502 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 DDX54Q8TDD1 881 aaKnown RBP14.87□□□□□ -0.03
UBA3-203ENST00000415609 STRN4Q9NRL3 753 aa14.87□□□□□ -0.03
UBA3-203ENST00000415609 RBM8AQ9Y5S9 174 aaKnown RBP14.87□□□□□ -0.03
UBA3-203ENST00000415609 WDR33Q9C0J8 1336 aaKnown RBP14.86□□□□□ -0.03
UBA3-203ENST00000415609 A0A0D9SFI3 127 aa14.86□□□□□ -0.03
UBA3-203ENST00000415609 ADCK5Q3MIX3 580 aa14.86□□□□□ -0.03
UBA3-203ENST00000415609 TNNI3KQ59H18 835 aa14.86□□□□□ -0.03
UBA3-203ENST00000415609 PDRG1Q9NUG6 133 aa14.86□□□□□ -0.03
UBA3-203ENST00000415609 CHMP3Q9Y3E7 222 aa14.86□□□□□ -0.03
UBA3-203ENST00000415609 FPGT-TNNI3KV9GXZ4 949 aa14.86□□□□□ -0.03
UBA3-203ENST00000415609 ZNF335Q9H4Z2 1342 aaPredicted RBP14.86□□□□□ -0.03
UBA3-203ENST00000415609 KCPQ6ZWJ8 1503 aa14.86□□□□□ -0.03
UBA3-203ENST00000415609 ZNF445P59923 1031 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 NECTIN1Q15223 517 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 CARD10Q9BWT7 1032 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 DBNLQ9UJU6 430 aaKnown RBP14.85□□□□□ -0.03
UBA3-203ENST00000415609 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.85□□□□□ -0.03
UBA3-203ENST00000415609 CYP46A1Q9Y6A2 500 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 STRCQ7RTU9 1775 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 PAPPAQ13219 1627 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 RPAP1Q9BWH6 1393 aaPredicted RBP14.85□□□□□ -0.03
UBA3-203ENST00000415609 CASP7P55210 303 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 EVA1CP58658 441 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 VPS53Q5VIR6 699 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 CREB3L3Q68CJ9 461 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 LMBR1LQ6UX01 489 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 TTLL7Q6ZT98 887 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 KCNB2Q92953 911 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 TM6SF1Q9BZW5 370 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 RBM27Q9P2N5 1060 aaKnown RBP14.85□□□□□ -0.03
UBA3-203ENST00000415609 NUP188Q5SRE5 1749 aa14.85□□□□□ -0.03
UBA3-203ENST00000415609 A1BGP04217 495 aa14.84□□□□□ -0.03
UBA3-203ENST00000415609 FOXD4L6Q3SYB3 417 aaPredicted RBP14.84□□□□□ -0.03
UBA3-203ENST00000415609 FOXD4L3Q6VB84 417 aaPredicted RBP14.84□□□□□ -0.03
UBA3-203ENST00000415609 MAP4K1Q92918 833 aa14.84□□□□□ -0.03
UBA3-203ENST00000415609 ZSWIM6Q9HCJ5 1215 aa14.84□□□□□ -0.03
UBA3-203ENST00000415609 CWC25Q9NXE8 425 aaPredicted RBP14.84□□□□□ -0.03
UBA3-203ENST00000415609 SHANK3Q9BYB0 1731 aa14.84□□□□□ -0.03
UBA3-203ENST00000415609 MBD3O95983 291 aa14.83□□□□□ -0.03
UBA3-203ENST00000415609 ATP5JP18859 108 aa14.83□□□□□ -0.03
UBA3-203ENST00000415609 NASPP49321 788 aaPredicted RBP14.83□□□□□ -0.03
UBA3-203ENST00000415609 NKX1-1Q15270 411 aaPredicted RBP14.83□□□□□ -0.03
UBA3-203ENST00000415609 EDC3Q96F86 508 aaKnown RBP14.83□□□□□ -0.03
UBA3-203ENST00000415609 SNRKQ9NRH2 765 aa14.83□□□□□ -0.03
UBA3-203ENST00000415609 SMC3Q9UQE7 1217 aa14.83□□□□□ -0.03
UBA3-203ENST00000415609 MED23Q9ULK4 1368 aa14.83□□□□□ -0.04
UBA3-203ENST00000415609 LARGE1O95461 756 aa14.83□□□□□ -0.04
UBA3-203ENST00000415609 ZBTB3Q9H5J0 574 aa14.83□□□□□ -0.04
UBA3-203ENST00000415609 H7C1W4 665 aa14.82□□□□□ -0.04
UBA3-203ENST00000415609 SLC27A2O14975 620 aa14.82□□□□□ -0.04
UBA3-203ENST00000415609 RNF20Q5VTR2 975 aa14.82□□□□□ -0.04
UBA3-203ENST00000415609 CCDC83Q8IWF9 413 aa14.82□□□□□ -0.04
UBA3-203ENST00000415609 DBNDD2Q9BQY9 259 aa14.82□□□□□ -0.04
UBA3-203ENST00000415609 RRAGDQ9NQL2 400 aaPredicted RBP14.82□□□□□ -0.04
UBA3-203ENST00000415609 TJP1Q07157 1748 aa14.82□□□□□ -0.04
UBA3-203ENST00000415609 FOXO4P98177 505 aa14.82□□□□□ -0.04
UBA3-203ENST00000415609 ZSCAN31Q96LW9 406 aaPredicted RBP14.82□□□□□ -0.04
UBA3-203ENST00000415609 DNAJC2Q99543 621 aaKnown RBP14.82□□□□□ -0.04
UBA3-203ENST00000415609 NSFL1CQ9UNZ2 370 aaKnown RBP14.82□□□□□ -0.04
UBA3-203ENST00000415609 TNS2Q63HR2 1409 aa14.81□□□□□ -0.04
UBA3-203ENST00000415609 PSMA5P28066 241 aa14.81□□□□□ -0.04
UBA3-203ENST00000415609 ZNF589Q86UQ0 364 aaPredicted RBP14.81□□□□□ -0.04
UBA3-203ENST00000415609 ANP32BQ92688 251 aaKnown RBP14.81□□□□□ -0.04
UBA3-203ENST00000415609 SH2B1Q9NRF2 756 aaPredicted RBP14.81□□□□□ -0.04
UBA3-203ENST00000415609 TMEM63CQ9P1W3 806 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms