RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 CCDC83Q8IWF9 413 aa25.02■■□□□ 1.6
SPRN-201ENST00000414069 GPATCH3Q96I76 525 aa25.02■■□□□ 1.6
SPRN-201ENST00000414069 SYCE3A1L190 88 aa25.02■■□□□ 1.6
SPRN-201ENST00000414069 TTLL7Q6ZT98 887 aa25.01■■□□□ 1.59
SPRN-201ENST00000414069 ZSCAN30Q86W11 494 aa25.01■■□□□ 1.59
SPRN-201ENST00000414069 CADPS2Q86UW7 1296 aa25.01■■□□□ 1.59
SPRN-201ENST00000414069 MED1Q15648 1581 aaPredicted RBP25.01■■□□□ 1.59
SPRN-201ENST00000414069 A0A0D9SFI3 127 aa25■■□□□ 1.59
SPRN-201ENST00000414069 NASPP49321 788 aaPredicted RBP25■■□□□ 1.59
SPRN-201ENST00000414069 PRIM1P49642 420 aaKnown RBP25■■□□□ 1.59
SPRN-201ENST00000414069 TFCP2Q12800 502 aa25■■□□□ 1.59
SPRN-201ENST00000414069 RUFY3Q7L099 469 aa25■■□□□ 1.59
SPRN-201ENST00000414069 ANP32BQ92688 251 aaKnown RBP25■■□□□ 1.59
SPRN-201ENST00000414069 FMNL2Q96PY5 1086 aa25■■□□□ 1.59
SPRN-201ENST00000414069 TMEM63CQ9P1W3 806 aa25■■□□□ 1.59
SPRN-201ENST00000414069 GADD45BO75293 160 aaPredicted RBP24.99■■□□□ 1.59
SPRN-201ENST00000414069 MST1RQ04912 1400 aa24.99■■□□□ 1.59
SPRN-201ENST00000414069 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.99■■□□□ 1.59
SPRN-201ENST00000414069 METTL22Q9BUU2 404 aaPredicted RBP24.99■■□□□ 1.59
SPRN-201ENST00000414069 ANAPC15P60006 121 aa24.99■■□□□ 1.59
SPRN-201ENST00000414069 MTX1Q13505 466 aa24.99■■□□□ 1.59
SPRN-201ENST00000414069 DCAF5Q96JK2 942 aa24.99■■□□□ 1.59
SPRN-201ENST00000414069 NEUROD6Q96NK8 337 aa24.99■■□□□ 1.59
SPRN-201ENST00000414069 HEG1Q9ULI3 1381 aa24.98■■□□□ 1.59
SPRN-201ENST00000414069 KDM3BQ7LBC6 1761 aa24.98■■□□□ 1.59
SPRN-201ENST00000414069 CCDC129Q6ZRS4 1044 aa24.98■■□□□ 1.59
SPRN-201ENST00000414069 AOX1Q06278 1338 aa24.98■■□□□ 1.59
SPRN-201ENST00000414069 LMBR1LQ6UX01 489 aa24.97■■□□□ 1.59
SPRN-201ENST00000414069 SEC62Q99442 399 aaKnown RBP24.97■■□□□ 1.59
SPRN-201ENST00000414069 SLIT3O75094 1523 aa24.97■■□□□ 1.59
SPRN-201ENST00000414069 ADAMTSL3P82987 1691 aa24.97■■□□□ 1.59
SPRN-201ENST00000414069 PPFIA3O75145 1194 aa24.97■■□□□ 1.59
SPRN-201ENST00000414069 STK3Q13188 491 aa24.97■■□□□ 1.59
SPRN-201ENST00000414069 RBM8AQ9Y5S9 174 aaKnown RBP24.97■■□□□ 1.59
SPRN-201ENST00000414069 TTC41PQ6P2S7 1318 aa24.97■■□□□ 1.59
SPRN-201ENST00000414069 ZNF589Q86UQ0 364 aaPredicted RBP24.97■■□□□ 1.59
SPRN-201ENST00000414069 ERC1Q8IUD2 1116 aa24.97■■□□□ 1.59
SPRN-201ENST00000414069 ZNF594Q96JF6 807 aaPredicted RBP24.97■■□□□ 1.59
SPRN-201ENST00000414069 BRINP3Q76B58 766 aa24.96■■□□□ 1.59
SPRN-201ENST00000414069 MPNDQ8N594 471 aa24.96■■□□□ 1.59
SPRN-201ENST00000414069 BRD1O95696 1058 aa24.96■■□□□ 1.59
SPRN-201ENST00000414069 CUL4AQ13619 759 aa24.96■■□□□ 1.59
SPRN-201ENST00000414069 DDX46Q7L014 1031 aaKnown RBP24.96■■□□□ 1.59
SPRN-201ENST00000414069 MCM2P49736 904 aa24.95■■□□□ 1.59
SPRN-201ENST00000414069 DBNDD2Q9BQY9 259 aa24.95■■□□□ 1.58
SPRN-201ENST00000414069 RBSNQ9H1K0 784 aa24.95■■□□□ 1.58
SPRN-201ENST00000414069 NCAPD2Q15021 1401 aa24.95■■□□□ 1.58
SPRN-201ENST00000414069 NBPF26B4DH59 902 aa24.95■■□□□ 1.58
SPRN-201ENST00000414069 NBPF14Q5TI25 921 aa24.95■■□□□ 1.58
SPRN-201ENST00000414069 NBPF10Q6P3W6 841 aaKnown RBP24.95■■□□□ 1.58
SPRN-201ENST00000414069 NBPF15Q8N660 670 aa24.95■■□□□ 1.58
SPRN-201ENST00000414069 RUFY2Q8WXA3 655 aa24.95■■□□□ 1.58
SPRN-201ENST00000414069 EVI5LQ96CN4 794 aa24.95■■□□□ 1.58
SPRN-201ENST00000414069 LMO7Q8WWI1 1683 aa24.94■■□□□ 1.58
SPRN-201ENST00000414069 PDRG1Q9NUG6 133 aa24.94■■□□□ 1.58
SPRN-201ENST00000414069 DBNLQ9UJU6 430 aaKnown RBP24.94■■□□□ 1.58
SPRN-201ENST00000414069 SPATA31A3Q5VYP0 1347 aa24.94■■□□□ 1.58
SPRN-201ENST00000414069 FIBPO43427 364 aa24.94■■□□□ 1.58
SPRN-201ENST00000414069 EVA1CP58658 441 aa24.94■■□□□ 1.58
SPRN-201ENST00000414069 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
SPRN-201ENST00000414069 VPS37CA5D8V6 355 aaPredicted RBP24.93■■□□□ 1.58
SPRN-201ENST00000414069 CNPY2Q9Y2B0 182 aa24.93■■□□□ 1.58
SPRN-201ENST00000414069 ZNF142P52746 1687 aaPredicted RBP24.93■■□□□ 1.58
SPRN-201ENST00000414069 TIMM10P62072 90 aa24.93■■□□□ 1.58
SPRN-201ENST00000414069 FERMT3Q86UX7 667 aa24.93■■□□□ 1.58
SPRN-201ENST00000414069 SMC3Q9UQE7 1217 aa24.93■■□□□ 1.58
SPRN-201ENST00000414069 CLEC17AQ6ZS10 378 aa24.92■■□□□ 1.58
SPRN-201ENST00000414069 SMAP1Q8IYB5 467 aaPredicted RBP24.92■■□□□ 1.58
SPRN-201ENST00000414069 USP54Q70EL1 1684 aa24.92■■□□□ 1.58
SPRN-201ENST00000414069 PTPN12Q05209 780 aaKnown RBP24.92■■□□□ 1.58
SPRN-201ENST00000414069 ZCRB1Q8TBF4 217 aaKnown RBP24.92■■□□□ 1.58
SPRN-201ENST00000414069 TSC1Q92574 1164 aa24.92■■□□□ 1.58
SPRN-201ENST00000414069 LRRC2Q9BYS8 371 aa24.92■■□□□ 1.58
SPRN-201ENST00000414069 PTMSP20962 102 aa24.91■■□□□ 1.58
SPRN-201ENST00000414069 FAM173BQ6P4H8 233 aa24.91■■□□□ 1.58
SPRN-201ENST00000414069 LIMCH1Q9UPQ0 1083 aa24.91■■□□□ 1.58
SPRN-201ENST00000414069 CCDC171Q6TFL3 1326 aa24.91■■□□□ 1.58
SPRN-201ENST00000414069 ZNF335Q9H4Z2 1342 aaPredicted RBP24.91■■□□□ 1.58
SPRN-201ENST00000414069 CREB3L3Q68CJ9 461 aa24.91■■□□□ 1.58
SPRN-201ENST00000414069 TTC14Q96N46 770 aa24.91■■□□□ 1.58
SPRN-201ENST00000414069 USP48Q86UV5 1035 aa24.9■■□□□ 1.58
SPRN-201ENST00000414069 CCDC173Q0VFZ6 552 aa24.9■■□□□ 1.58
SPRN-201ENST00000414069 LRP10Q7Z4F1 713 aa24.9■■□□□ 1.58
SPRN-201ENST00000414069 MAP7D2Q96T17 732 aa24.9■■□□□ 1.58
SPRN-201ENST00000414069 SYT1P21579 422 aa24.9■■□□□ 1.58
SPRN-201ENST00000414069 FOSBP53539 338 aa24.9■■□□□ 1.58
SPRN-201ENST00000414069 CYP46A1Q9Y6A2 500 aa24.9■■□□□ 1.58
SPRN-201ENST00000414069 ZKSCAN1P17029 563 aaPredicted RBP24.89■■□□□ 1.58
SPRN-201ENST00000414069 TAOK2Q9UL54 1235 aa24.89■■□□□ 1.58
SPRN-201ENST00000414069 HDAC5Q9UQL6 1122 aa24.89■■□□□ 1.58
SPRN-201ENST00000414069 MAPK8IP2Q13387 824 aaPredicted RBP24.89■■□□□ 1.57
SPRN-201ENST00000414069 VGLL3A8MV65 326 aa24.88■■□□□ 1.57
SPRN-201ENST00000414069 GJB2P29033 226 aa24.88■■□□□ 1.57
SPRN-201ENST00000414069 CBX1P83916 185 aa24.88■■□□□ 1.57
SPRN-201ENST00000414069 SYTL4Q96C24 671 aaPredicted RBP24.88■■□□□ 1.57
SPRN-201ENST00000414069 GTF2E1P29083 439 aaPredicted RBP24.88■■□□□ 1.57
SPRN-201ENST00000414069 TRPM3Q9HCF6 1732 aaPredicted RBP24.88■■□□□ 1.57
SPRN-201ENST00000414069 IGSF3O75054 1194 aa24.88■■□□□ 1.57
SPRN-201ENST00000414069 ME3Q16798 604 aa24.88■■□□□ 1.57
SPRN-201ENST00000414069 TNNI3KQ59H18 835 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms