RNA–Protein interactions for RNA: ENST00000412922.6

COPS7B-209, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 5

Gene COPS7B, Length 1,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-209ENST00000412922 RRP7AQ9Y3A4 280 aaKnown RBP16.01■□□□□ 0.15
COPS7B-209ENST00000412922 HOXA10P31260 410 aaPredicted RBP16■□□□□ 0.15
COPS7B-209ENST00000412922 MIER1Q8N108 512 aa16■□□□□ 0.15
COPS7B-209ENST00000412922 SYNE4Q8N205 404 aa16■□□□□ 0.15
COPS7B-209ENST00000412922 NGEFQ8N5V2 710 aa16■□□□□ 0.15
COPS7B-209ENST00000412922 MYL6BP14649 208 aa16■□□□□ 0.15
COPS7B-209ENST00000412922 EPHX2P34913 555 aa16■□□□□ 0.15
COPS7B-209ENST00000412922 PARP10Q53GL7 1025 aa16■□□□□ 0.15
COPS7B-209ENST00000412922 EAPPQ56P03 285 aaPredicted RBP16■□□□□ 0.15
COPS7B-209ENST00000412922 PPP1R42Q7Z4L9 355 aa16■□□□□ 0.15
COPS7B-209ENST00000412922 NUTM1Q86Y26 1132 aa16■□□□□ 0.15
COPS7B-209ENST00000412922 MKRN1Q9UHC7 482 aaKnown RBP16■□□□□ 0.15
COPS7B-209ENST00000412922 RNF123Q5XPI4 1314 aa15.99■□□□□ 0.15
COPS7B-209ENST00000412922 UBN2Q6ZU65 1347 aa15.99■□□□□ 0.15
COPS7B-209ENST00000412922 TMEM88BA6NKF7 163 aa15.99■□□□□ 0.15
COPS7B-209ENST00000412922 EIF6P56537 245 aaKnown RBP15.99■□□□□ 0.15
COPS7B-209ENST00000412922 LMOD3Q0VAK6 560 aa15.99■□□□□ 0.15
COPS7B-209ENST00000412922 GIGYF2Q6Y7W6 1299 aaKnown RBP15.99■□□□□ 0.15
COPS7B-209ENST00000412922 RBM17Q96I25 401 aaKnown RBP15.99■□□□□ 0.15
COPS7B-209ENST00000412922 ZBTB3Q9H5J0 574 aa15.99■□□□□ 0.15
COPS7B-209ENST00000412922 BABAM1Q9NWV8 329 aa15.99■□□□□ 0.15
COPS7B-209ENST00000412922 OLFM4Q6UX06 510 aa15.98■□□□□ 0.15
COPS7B-209ENST00000412922 TTLL7Q6ZT98 887 aa15.98■□□□□ 0.15
COPS7B-209ENST00000412922 YTHDC1Q96MU7 727 aaKnown RBP15.98■□□□□ 0.15
COPS7B-209ENST00000412922 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
COPS7B-209ENST00000412922 TMX4Q9H1E5 349 aaPredicted RBP15.98■□□□□ 0.15
COPS7B-209ENST00000412922 TSPYL4Q9UJ04 414 aa15.98■□□□□ 0.15
COPS7B-209ENST00000412922 GPTP24298 496 aa15.98■□□□□ 0.15
COPS7B-209ENST00000412922 ZNF34Q8IZ26 560 aa15.98■□□□□ 0.15
COPS7B-209ENST00000412922 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
COPS7B-209ENST00000412922 PPEF1O14829 653 aaPredicted RBP15.97■□□□□ 0.15
COPS7B-209ENST00000412922 NTSR2O95665 410 aa15.97■□□□□ 0.15
COPS7B-209ENST00000412922 LMOD1P29536 600 aaPredicted RBP15.97■□□□□ 0.15
COPS7B-209ENST00000412922 THUMPD2Q9BTF0 503 aaKnown RBP15.97■□□□□ 0.15
COPS7B-209ENST00000412922 SUPT16HQ9Y5B9 1047 aaKnown RBP15.96■□□□□ 0.15
COPS7B-209ENST00000412922 ITGBL1O95965 494 aaPredicted RBP15.96■□□□□ 0.14
COPS7B-209ENST00000412922 SUSD4Q5VX71 490 aa15.96■□□□□ 0.14
COPS7B-209ENST00000412922 RALBP1Q15311 655 aa15.95■□□□□ 0.14
COPS7B-209ENST00000412922 HSP90AB3PQ58FF7 597 aa15.95■□□□□ 0.14
COPS7B-209ENST00000412922 LARGE2Q8N3Y3 721 aa15.95■□□□□ 0.14
COPS7B-209ENST00000412922 AIDAQ96BJ3 306 aa15.95■□□□□ 0.14
COPS7B-209ENST00000412922 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
COPS7B-209ENST00000412922 VPS33BQ9H267 617 aa15.95■□□□□ 0.14
COPS7B-209ENST00000412922 COL4A5P29400 1685 aa15.95■□□□□ 0.14
COPS7B-209ENST00000412922 LAMB2P55268 1798 aa15.94■□□□□ 0.14
COPS7B-209ENST00000412922 NIM1KQ8IY84 436 aa15.94■□□□□ 0.14
COPS7B-209ENST00000412922 UTP14AQ9BVJ6 771 aaKnown RBP15.94■□□□□ 0.14
COPS7B-209ENST00000412922 LTBP1Q14766 1721 aa15.94■□□□□ 0.14
COPS7B-209ENST00000412922 CAPN15O75808 1086 aa15.93■□□□□ 0.14
COPS7B-209ENST00000412922 RIPK4P57078 832 aa15.93■□□□□ 0.14
COPS7B-209ENST00000412922 CNTROBQ8N137 903 aa15.93■□□□□ 0.14
COPS7B-209ENST00000412922 SUPT20HQ8NEM7 779 aa15.93■□□□□ 0.14
COPS7B-209ENST00000412922 GJA3Q9Y6H8 435 aa15.93■□□□□ 0.14
COPS7B-209ENST00000412922 THSD7BQ9C0I4 1608 aa15.93■□□□□ 0.14
COPS7B-209ENST00000412922 RASSF10A6NK89 507 aa15.92■□□□□ 0.14
COPS7B-209ENST00000412922 PRDM10Q9NQV6 1147 aa15.92■□□□□ 0.14
COPS7B-209ENST00000412922 TRPM7Q96QT4 1865 aa15.92■□□□□ 0.14
COPS7B-209ENST00000412922 MAP1SQ66K74 1059 aaPredicted RBP15.92■□□□□ 0.14
COPS7B-209ENST00000412922 LRP10Q7Z4F1 713 aa15.92■□□□□ 0.14
COPS7B-209ENST00000412922 PPIP5K2O43314 1243 aa15.91■□□□□ 0.14
COPS7B-209ENST00000412922 EIF2S2P20042 333 aaKnown RBP15.91■□□□□ 0.14
COPS7B-209ENST00000412922 CTCFP49711 727 aaPredicted RBP15.91■□□□□ 0.14
COPS7B-209ENST00000412922 VEGFBP49765 207 aa15.91■□□□□ 0.14
COPS7B-209ENST00000412922 SLC10A5Q5PT55 438 aa15.91■□□□□ 0.14
COPS7B-209ENST00000412922 USP50Q70EL3 339 aaPredicted RBP15.91■□□□□ 0.14
COPS7B-209ENST00000412922 TSHZ2Q9NRE2 1034 aa15.91■□□□□ 0.14
COPS7B-209ENST00000412922 ATP6V0A2Q9Y487 856 aa15.91■□□□□ 0.14
COPS7B-209ENST00000412922 FOXN1O15353 648 aa15.9■□□□□ 0.14
COPS7B-209ENST00000412922 SCNN1DP51172 638 aa15.9■□□□□ 0.14
COPS7B-209ENST00000412922 PDIA6Q15084 440 aa15.9■□□□□ 0.14
COPS7B-209ENST00000412922 ABCC4O15439 1325 aa15.9■□□□□ 0.14
COPS7B-209ENST00000412922 CDHR2Q9BYE9 1310 aa15.9■□□□□ 0.14
COPS7B-209ENST00000412922 TMPOP42166 694 aaKnown RBP15.9■□□□□ 0.14
COPS7B-209ENST00000412922 DEFB115Q30KQ5 88 aa15.9■□□□□ 0.14
COPS7B-209ENST00000412922 LRRC37AA6NMS7 1700 aa15.9■□□□□ 0.14
COPS7B-209ENST00000412922 DDX21Q9NR30 783 aaKnown RBP eCLIP15.89■□□□□ 0.13
COPS7B-209ENST00000412922 ABT1Q9ULW3 272 aaKnown RBP15.89■□□□□ 0.13
COPS7B-209ENST00000412922 BBOX1O75936 387 aa15.88■□□□□ 0.13
COPS7B-209ENST00000412922 C3orf67Q6ZVT6 689 aa15.88■□□□□ 0.13
COPS7B-209ENST00000412922 TMC4Q7Z404 712 aa15.88■□□□□ 0.13
COPS7B-209ENST00000412922 RTFDC1Q9BY42 306 aaPredicted RBP15.88■□□□□ 0.13
COPS7B-209ENST00000412922 MYBBP1AQ9BQG0 1328 aaKnown RBP15.88■□□□□ 0.13
COPS7B-209ENST00000412922 MAP2K1Q02750 393 aaPredicted RBP15.88■□□□□ 0.13
COPS7B-209ENST00000412922 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
COPS7B-209ENST00000412922 SH3TC1Q8TE82 1336 aa15.88■□□□□ 0.13
COPS7B-209ENST00000412922 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
COPS7B-209ENST00000412922 HOXB7P09629 217 aa15.87■□□□□ 0.13
COPS7B-209ENST00000412922 AOC3Q16853 763 aa15.87■□□□□ 0.13
COPS7B-209ENST00000412922 DPP8Q6V1X1 898 aaPredicted RBP15.87■□□□□ 0.13
COPS7B-209ENST00000412922 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
COPS7B-209ENST00000412922 NLRP10Q86W26 655 aa15.87■□□□□ 0.13
COPS7B-209ENST00000412922 ADARB2Q9NS39 739 aaKnown RBP15.87■□□□□ 0.13
COPS7B-209ENST00000412922 WBP1LQ9NX94 342 aa15.87■□□□□ 0.13
COPS7B-209ENST00000412922 ZNRF3Q9ULT6 936 aa15.87■□□□□ 0.13
COPS7B-209ENST00000412922 DDX60Q8IY21 1712 aaKnown RBP15.87■□□□□ 0.13
COPS7B-209ENST00000412922 WDR33Q9C0J8 1336 aaKnown RBP15.86■□□□□ 0.13
COPS7B-209ENST00000412922 EPS15P42566 896 aa15.86■□□□□ 0.13
COPS7B-209ENST00000412922 ECE1P42892 770 aa15.86■□□□□ 0.13
COPS7B-209ENST00000412922 COPS6Q7L5N1 327 aa15.86■□□□□ 0.13
COPS7B-209ENST00000412922 SP8Q8IXZ3 490 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms