RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 UTP14AQ9BVJ6 771 aaKnown RBP30.51■■■□□ 2.47
UBE2E3-202ENST00000410062 ABCC12Q96J65 1359 aa30.5■■■□□ 2.47
UBE2E3-202ENST00000410062 METTL22Q9BUU2 404 aaPredicted RBP30.49■■■□□ 2.47
UBE2E3-202ENST00000410062 BRCA1P38398 1863 aaKnown RBP30.49■■■□□ 2.47
UBE2E3-202ENST00000410062 H0YIN7 160 aa30.49■■■□□ 2.47
UBE2E3-202ENST00000410062 SSH1Q8WYL5 1049 aa30.48■■■□□ 2.47
UBE2E3-202ENST00000410062 PIM2Q9P1W9 311 aa30.48■■■□□ 2.47
UBE2E3-202ENST00000410062 COL11A2P13942 1736 aaPredicted RBP30.47■■■□□ 2.47
UBE2E3-202ENST00000410062 BCL2L13Q9BXK5 485 aa30.47■■■□□ 2.47
UBE2E3-202ENST00000410062 TRMT112Q9UI30 125 aaKnown RBP30.47■■■□□ 2.47
UBE2E3-202ENST00000410062 MRPL50Q8N5N7 158 aaKnown RBP30.46■■■□□ 2.47
UBE2E3-202ENST00000410062 BCS1LQ9Y276 419 aa30.46■■■□□ 2.47
UBE2E3-202ENST00000410062 DLEC1Q9Y238 1755 aa30.46■■■□□ 2.47
UBE2E3-202ENST00000410062 TRIM28Q13263 835 aaKnown RBP30.45■■■□□ 2.47
UBE2E3-202ENST00000410062 SYNE4Q8N205 404 aa30.45■■■□□ 2.47
UBE2E3-202ENST00000410062 TNRC6CQ9HCJ0 1690 aaKnown RBP30.45■■■□□ 2.47
UBE2E3-202ENST00000410062 CT47B1P0C2W7 299 aaPredicted RBP30.45■■■□□ 2.46
UBE2E3-202ENST00000410062 PDZRN3Q9UPQ7 1066 aa30.44■■■□□ 2.46
UBE2E3-202ENST00000410062 ZNF622Q969S3 477 aaKnown RBP eCLIP30.43■■■□□ 2.46
UBE2E3-202ENST00000410062 KLRG2A4D1S0 409 aaPredicted RBP30.42■■■□□ 2.46
UBE2E3-202ENST00000410062 F6X3S4 739 aa30.42■■■□□ 2.46
UBE2E3-202ENST00000410062 SRGNP10124 158 aa30.42■■■□□ 2.46
UBE2E3-202ENST00000410062 ALDH1L2Q3SY69 923 aa30.42■■■□□ 2.46
UBE2E3-202ENST00000410062 DALRD3Q5D0E6 543 aaKnown RBP30.42■■■□□ 2.46
UBE2E3-202ENST00000410062 DNAAF4Q8WXU2 420 aa30.42■■■□□ 2.46
UBE2E3-202ENST00000410062 RNF123Q5XPI4 1314 aa30.42■■■□□ 2.46
UBE2E3-202ENST00000410062 SH3TC1Q8TE82 1336 aa30.42■■■□□ 2.46
UBE2E3-202ENST00000410062 IGKV5-2P06315 115 aa30.41■■■□□ 2.46
UBE2E3-202ENST00000410062 NEXNQ0ZGT2 675 aa30.41■■■□□ 2.46
UBE2E3-202ENST00000410062 RTL5Q5HYW3 569 aaPredicted RBP30.41■■■□□ 2.46
UBE2E3-202ENST00000410062 FAM89AQ96GI7 184 aa30.41■■■□□ 2.46
UBE2E3-202ENST00000410062 CCDC191Q8NCU4 936 aa30.41■■■□□ 2.46
UBE2E3-202ENST00000410062 SMC4Q9NTJ3 1288 aa30.41■■■□□ 2.46
UBE2E3-202ENST00000410062 HCLS1P14317 486 aaPredicted RBP30.4■■■□□ 2.46
UBE2E3-202ENST00000410062 CWF19L2Q2TBE0 894 aaKnown RBP30.4■■■□□ 2.46
UBE2E3-202ENST00000410062 SLC10A5Q5PT55 438 aa30.4■■■□□ 2.46
UBE2E3-202ENST00000410062 C3orf67Q6ZVT6 689 aa30.4■■■□□ 2.46
UBE2E3-202ENST00000410062 CWC25Q9NXE8 425 aaPredicted RBP30.4■■■□□ 2.46
UBE2E3-202ENST00000410062 RIC1Q4ADV7 1423 aa30.39■■■□□ 2.46
UBE2E3-202ENST00000410062 TTLL6Q8N841 843 aa30.39■■■□□ 2.46
UBE2E3-202ENST00000410062 MASTLQ96GX5 879 aa30.39■■■□□ 2.46
UBE2E3-202ENST00000410062 GRIN3BO60391 1043 aa30.38■■■□□ 2.45
UBE2E3-202ENST00000410062 STYK1Q6J9G0 422 aa30.37■■■□□ 2.45
UBE2E3-202ENST00000410062 NEURL1BA8MQ27 555 aa30.37■■■□□ 2.45
UBE2E3-202ENST00000410062 NPR1P16066 1061 aa30.37■■■□□ 2.45
UBE2E3-202ENST00000410062 RARSP54136 660 aaKnown RBP30.37■■■□□ 2.45
UBE2E3-202ENST00000410062 CRY2Q49AN0 593 aa30.37■■■□□ 2.45
UBE2E3-202ENST00000410062 ZBTB38Q8NAP3 1195 aaPredicted RBP30.37■■■□□ 2.45
UBE2E3-202ENST00000410062 JARID2Q92833 1246 aaPredicted RBP30.37■■■□□ 2.45
UBE2E3-202ENST00000410062 NLRP3Q96P20 1036 aa30.37■■■□□ 2.45
UBE2E3-202ENST00000410062 ARFGEF1Q9Y6D6 1849 aa30.35■■■□□ 2.45
UBE2E3-202ENST00000410062 CACNA1SQ13698 1873 aa30.35■■■□□ 2.45
UBE2E3-202ENST00000410062 DDX60Q8IY21 1712 aaKnown RBP30.34■■■□□ 2.45
UBE2E3-202ENST00000410062 PTPRCP08575 1304 aa30.33■■■□□ 2.45
UBE2E3-202ENST00000410062 SLC4A10Q6U841 1118 aa30.33■■■□□ 2.45
UBE2E3-202ENST00000410062 LINS1Q8NG48 757 aa30.33■■■□□ 2.45
UBE2E3-202ENST00000410062 CNKSR1Q969H4 720 aa30.33■■■□□ 2.45
UBE2E3-202ENST00000410062 LAMB2P55268 1798 aa30.33■■■□□ 2.45
UBE2E3-202ENST00000410062 IRS4O14654 1257 aaPredicted RBP30.32■■■□□ 2.45
UBE2E3-202ENST00000410062 PCCAP05165 728 aaPredicted RBP30.32■■■□□ 2.45
UBE2E3-202ENST00000410062 RPGRQ92834 1020 aaKnown RBP30.32■■■□□ 2.45
UBE2E3-202ENST00000410062 BEND3Q5T5X7 828 aa30.32■■■□□ 2.44
UBE2E3-202ENST00000410062 PRPF40BQ6NWY9 871 aaKnown RBP30.32■■■□□ 2.44
UBE2E3-202ENST00000410062 ZNF219Q9P2Y4 722 aaPredicted RBP30.32■■■□□ 2.44
UBE2E3-202ENST00000410062 SLX4Q8IY92 1834 aa30.31■■■□□ 2.44
UBE2E3-202ENST00000410062 GCKRQ14397 625 aa30.31■■■□□ 2.44
UBE2E3-202ENST00000410062 NOB1Q9ULX3 412 aaKnown RBP30.3■■■□□ 2.44
UBE2E3-202ENST00000410062 ARHGAP27Q6ZUM4 889 aa30.29■■■□□ 2.44
UBE2E3-202ENST00000410062 YTHDC1Q96MU7 727 aaKnown RBP30.29■■■□□ 2.44
UBE2E3-202ENST00000410062 BRPF1P55201 1214 aaPredicted RBP30.28■■■□□ 2.44
UBE2E3-202ENST00000410062 C21orf2O43822 256 aa30.28■■■□□ 2.44
UBE2E3-202ENST00000410062 ALDH1B1P30837 517 aa30.28■■■□□ 2.44
UBE2E3-202ENST00000410062 HOXA10P31260 410 aaPredicted RBP30.28■■■□□ 2.44
UBE2E3-202ENST00000410062 RBM17Q96I25 401 aaKnown RBP30.28■■■□□ 2.44
UBE2E3-202ENST00000410062 BCAR3O75815 825 aa30.27■■■□□ 2.44
UBE2E3-202ENST00000410062 H7C1W4 665 aa30.26■■■□□ 2.43
UBE2E3-202ENST00000410062 UBE3BQ7Z3V4 1068 aa30.26■■■□□ 2.43
UBE2E3-202ENST00000410062 SRCIN1Q9C0H9 1055 aa30.25■■■□□ 2.43
UBE2E3-202ENST00000410062 CHD4Q14839 1912 aa30.25■■■□□ 2.43
UBE2E3-202ENST00000410062 CDHR2Q9BYE9 1310 aa30.25■■■□□ 2.43
UBE2E3-202ENST00000410062 CRAMP1Q96RY5 1269 aa30.24■■■□□ 2.43
UBE2E3-202ENST00000410062 HSP90B1P14625 803 aaKnown RBP30.24■■■□□ 2.43
UBE2E3-202ENST00000410062 SF3B3Q15393 1217 aaKnown RBP30.24■■■□□ 2.43
UBE2E3-202ENST00000410062 PDE8AO60658 829 aa30.23■■■□□ 2.43
UBE2E3-202ENST00000410062 ABCC4O15439 1325 aa30.22■■■□□ 2.43
UBE2E3-202ENST00000410062 KIF16BQ96L93 1317 aa30.22■■■□□ 2.43
UBE2E3-202ENST00000410062 ALDH1L1O75891 902 aa30.22■■■□□ 2.43
UBE2E3-202ENST00000410062 C7orf43Q8WVR3 580 aa30.22■■■□□ 2.43
UBE2E3-202ENST00000410062 CASP7P55210 303 aa30.21■■■□□ 2.43
UBE2E3-202ENST00000410062 OLFM4Q6UX06 510 aa30.21■■■□□ 2.43
UBE2E3-202ENST00000410062 DDX46Q7L014 1031 aaKnown RBP30.21■■■□□ 2.43
UBE2E3-202ENST00000410062 TAF1P21675 1872 aa30.21■■■□□ 2.43
UBE2E3-202ENST00000410062 FRAT1Q92837 279 aaPredicted RBP30.2■■■□□ 2.42
UBE2E3-202ENST00000410062 CCDC85AQ96PX6 553 aaPredicted RBP30.2■■■□□ 2.42
UBE2E3-202ENST00000410062 API5Q9BZZ5 524 aaKnown RBP30.2■■■□□ 2.42
UBE2E3-202ENST00000410062 GRM8O00222 908 aa30.18■■■□□ 2.42
UBE2E3-202ENST00000410062 RASSF7Q02833 373 aa30.18■■■□□ 2.42
UBE2E3-202ENST00000410062 SLC51AQ86UW1 340 aa30.18■■■□□ 2.42
UBE2E3-202ENST00000410062 C9orf78Q9NZ63 289 aaPredicted RBP30.18■■■□□ 2.42
UBE2E3-202ENST00000410062 PPEF1O14829 653 aaPredicted RBP30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms