RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 C21orf2O43822 256 aa21.97■■□□□ 1.11
PDE6D-202ENST00000409772 HSP90B1P14625 803 aaKnown RBP21.97■■□□□ 1.11
PDE6D-202ENST00000409772 CRY2Q49AN0 593 aa21.97■■□□□ 1.11
PDE6D-202ENST00000409772 PRPF40BQ6NWY9 871 aaKnown RBP21.97■■□□□ 1.11
PDE6D-202ENST00000409772 RPGRQ92834 1020 aaKnown RBP21.97■■□□□ 1.11
PDE6D-202ENST00000409772 PHAXQ9H814 394 aaKnown RBP21.97■■□□□ 1.11
PDE6D-202ENST00000409772 RIC1Q4ADV7 1423 aa21.97■■□□□ 1.11
PDE6D-202ENST00000409772 RBM17Q96I25 401 aaKnown RBP21.96■■□□□ 1.11
PDE6D-202ENST00000409772 ISCA1Q9BUE6 129 aa21.96■■□□□ 1.11
PDE6D-202ENST00000409772 SLC4A2P04920 1241 aa21.95■■□□□ 1.1
PDE6D-202ENST00000409772 LMNB1P20700 586 aa21.95■■□□□ 1.1
PDE6D-202ENST00000409772 C9orf131Q5VYM1 1079 aa21.95■■□□□ 1.1
PDE6D-202ENST00000409772 SH3TC1Q8TE82 1336 aa21.95■■□□□ 1.1
PDE6D-202ENST00000409772 VAMP4O75379 141 aa21.94■■□□□ 1.1
PDE6D-202ENST00000409772 HOXA10P31260 410 aaPredicted RBP21.94■■□□□ 1.1
PDE6D-202ENST00000409772 EXOSC9Q06265 439 aaKnown RBP21.94■■□□□ 1.1
PDE6D-202ENST00000409772 GRIPAP1Q4V328 841 aa21.94■■□□□ 1.1
PDE6D-202ENST00000409772 GPBP1L1Q9HC44 474 aaPredicted RBP21.94■■□□□ 1.1
PDE6D-202ENST00000409772 CC2D2BQ6DHV5 1058 aa21.93■■□□□ 1.1
PDE6D-202ENST00000409772 KSR2Q6VAB6 950 aa21.93■■□□□ 1.1
PDE6D-202ENST00000409772 RTKN2Q8IZC4 609 aa21.93■■□□□ 1.1
PDE6D-202ENST00000409772 CRAMP1Q96RY5 1269 aa21.93■■□□□ 1.1
PDE6D-202ENST00000409772 TMX4Q9H1E5 349 aaPredicted RBP21.93■■□□□ 1.1
PDE6D-202ENST00000409772 RNF181Q9P0P0 153 aa21.93■■□□□ 1.1
PDE6D-202ENST00000409772 ADCY9O60503 1353 aa21.92■■□□□ 1.1
PDE6D-202ENST00000409772 ZNF521Q96K83 1311 aa21.92■■□□□ 1.1
PDE6D-202ENST00000409772 ZC3H4Q9UPT8 1303 aaKnown RBP21.92■■□□□ 1.1
PDE6D-202ENST00000409772 NEXNQ0ZGT2 675 aa21.92■■□□□ 1.1
PDE6D-202ENST00000409772 CCDC93Q567U6 631 aa21.92■■□□□ 1.1
PDE6D-202ENST00000409772 CCDC191Q8NCU4 936 aa21.92■■□□□ 1.1
PDE6D-202ENST00000409772 ZNF219Q9P2Y4 722 aaPredicted RBP21.92■■□□□ 1.1
PDE6D-202ENST00000409772 ABCC12Q96J65 1359 aa21.91■■□□□ 1.1
PDE6D-202ENST00000409772 E9PSI1 815 aa21.91■■□□□ 1.1
PDE6D-202ENST00000409772 ATP5J2-PTCD1G3V325 749 aa21.91■■□□□ 1.1
PDE6D-202ENST00000409772 METTL22Q9BUU2 404 aaPredicted RBP21.91■■□□□ 1.1
PDE6D-202ENST00000409772 ANKRD36CQ5JPF3 1778 aa21.9■■□□□ 1.1
PDE6D-202ENST00000409772 LTBP3Q9NS15 1303 aa21.9■■□□□ 1.1
PDE6D-202ENST00000409772 MIER1Q8N108 512 aa21.9■■□□□ 1.1
PDE6D-202ENST00000409772 C7orf43Q8WVR3 580 aa21.9■■□□□ 1.1
PDE6D-202ENST00000409772 MYD88Q99836 296 aa21.9■■□□□ 1.1
PDE6D-202ENST00000409772 TAOK3Q9H2K8 898 aa21.9■■□□□ 1.1
PDE6D-202ENST00000409772 SPINK5Q9NQ38 1064 aaPredicted RBP21.9■■□□□ 1.1
PDE6D-202ENST00000409772 PI4KAP2A4QPH2 592 aa21.89■■□□□ 1.09
PDE6D-202ENST00000409772 PI4KAP1Q8N8J0 262 aa21.89■■□□□ 1.09
PDE6D-202ENST00000409772 MAP3K2Q9Y2U5 619 aa21.89■■□□□ 1.09
PDE6D-202ENST00000409772 COL11A2P13942 1736 aaPredicted RBP21.89■■□□□ 1.09
PDE6D-202ENST00000409772 NFKBIEO00221 500 aa21.88■■□□□ 1.09
PDE6D-202ENST00000409772 BBOX1O75936 387 aa21.88■■□□□ 1.09
PDE6D-202ENST00000409772 HCLS1P14317 486 aaPredicted RBP21.88■■□□□ 1.09
PDE6D-202ENST00000409772 DDX46Q7L014 1031 aaKnown RBP21.88■■□□□ 1.09
PDE6D-202ENST00000409772 ZBTB38Q8NAP3 1195 aaPredicted RBP21.88■■□□□ 1.09
PDE6D-202ENST00000409772 CWC25Q9NXE8 425 aaPredicted RBP21.88■■□□□ 1.09
PDE6D-202ENST00000409772 CACNA1FO60840 1977 aa21.88■■□□□ 1.09
PDE6D-202ENST00000409772 SLX4Q8IY92 1834 aa21.87■■□□□ 1.09
PDE6D-202ENST00000409772 KDM2BQ8NHM5 1336 aa21.87■■□□□ 1.09
PDE6D-202ENST00000409772 TCERG1O14776 1098 aaKnown RBP21.87■■□□□ 1.09
PDE6D-202ENST00000409772 RASSF7Q02833 373 aa21.87■■□□□ 1.09
PDE6D-202ENST00000409772 FLIIQ13045 1269 aa21.87■■□□□ 1.09
PDE6D-202ENST00000409772 FAM89AQ96GI7 184 aa21.87■■□□□ 1.09
PDE6D-202ENST00000409772 ARFGEF2Q9Y6D5 1785 aa21.85■■□□□ 1.09
PDE6D-202ENST00000409772 PCCAP05165 728 aaPredicted RBP21.85■■□□□ 1.09
PDE6D-202ENST00000409772 FKBP4Q02790 459 aaKnown RBP eCLIP21.85■■□□□ 1.09
PDE6D-202ENST00000409772 FKBP5Q13451 457 aaPredicted RBP21.85■■□□□ 1.09
PDE6D-202ENST00000409772 DPY19L2Q6NUT2 758 aa21.85■■□□□ 1.09
PDE6D-202ENST00000409772 TMC4Q7Z404 712 aa21.85■■□□□ 1.09
PDE6D-202ENST00000409772 ZNF526Q8TF50 670 aaPredicted RBP21.85■■□□□ 1.09
PDE6D-202ENST00000409772 ZNF428Q96B54 188 aa21.85■■□□□ 1.09
PDE6D-202ENST00000409772 SBF1O95248 1867 aa21.84■■□□□ 1.09
PDE6D-202ENST00000409772 IRS4O14654 1257 aaPredicted RBP21.84■■□□□ 1.09
PDE6D-202ENST00000409772 SLFN5Q08AF3 891 aa21.84■■□□□ 1.09
PDE6D-202ENST00000409772 SF3B3Q15393 1217 aaKnown RBP21.84■■□□□ 1.09
PDE6D-202ENST00000409772 SYNE4Q8N205 404 aa21.84■■□□□ 1.09
PDE6D-202ENST00000409772 PPEF1O14829 653 aaPredicted RBP21.83■■□□□ 1.09
PDE6D-202ENST00000409772 G2E3Q7L622 706 aa21.83■■□□□ 1.09
PDE6D-202ENST00000409772 C3orf67Q6ZVT6 689 aa21.82■■□□□ 1.08
PDE6D-202ENST00000409772 PSMD1Q99460 953 aa21.82■■□□□ 1.08
PDE6D-202ENST00000409772 FER1L6Q2WGJ9 1857 aa21.81■■□□□ 1.08
PDE6D-202ENST00000409772 RTL5Q5HYW3 569 aaPredicted RBP21.81■■□□□ 1.08
PDE6D-202ENST00000409772 DNAAF4Q8WXU2 420 aa21.81■■□□□ 1.08
PDE6D-202ENST00000409772 ATP6V0A2Q9Y487 856 aa21.81■■□□□ 1.08
PDE6D-202ENST00000409772 CACNA1SQ13698 1873 aa21.8■■□□□ 1.08
PDE6D-202ENST00000409772 TNRC6CQ9HCJ0 1690 aaKnown RBP21.8■■□□□ 1.08
PDE6D-202ENST00000409772 PDE8AO60658 829 aa21.8■■□□□ 1.08
PDE6D-202ENST00000409772 GRAPQ13588 217 aa21.8■■□□□ 1.08
PDE6D-202ENST00000409772 SP8Q8IXZ3 490 aa21.8■■□□□ 1.08
PDE6D-202ENST00000409772 GRAPLQ8TC17 118 aaPredicted RBP21.8■■□□□ 1.08
PDE6D-202ENST00000409772 VPS33BQ9H267 617 aa21.8■■□□□ 1.08
PDE6D-202ENST00000409772 ABCC4O15439 1325 aa21.8■■□□□ 1.08
PDE6D-202ENST00000409772 GLTPD2A6NH11 291 aa21.79■■□□□ 1.08
PDE6D-202ENST00000409772 CT47B1P0C2W7 299 aaPredicted RBP21.79■■□□□ 1.08
PDE6D-202ENST00000409772 LINS1Q8NG48 757 aa21.79■■□□□ 1.08
PDE6D-202ENST00000409772 CDHR2Q9BYE9 1310 aa21.79■■□□□ 1.08
PDE6D-202ENST00000409772 NEURL1BA8MQ27 555 aa21.78■■□□□ 1.08
PDE6D-202ENST00000409772 IGKV5-2P06315 115 aa21.78■■□□□ 1.08
PDE6D-202ENST00000409772 PRELPP51888 382 aa21.78■■□□□ 1.08
PDE6D-202ENST00000409772 C1QTNF8P60827 252 aa21.78■■□□□ 1.08
PDE6D-202ENST00000409772 CCDC152Q4G0S7 254 aa21.78■■□□□ 1.08
PDE6D-202ENST00000409772 SUPT20HQ8NEM7 779 aa21.78■■□□□ 1.08
PDE6D-202ENST00000409772 TRMT2AQ8IZ69 625 aaKnown RBP21.77■■□□□ 1.08
PDE6D-202ENST00000409772 JDP2Q8WYK2 163 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms