RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 HOMER1Q86YM7 354 aa19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 GOLIM4O00461 696 aa19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 MEIS3Q99687 375 aa19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 PLCG2P16885 1265 aa19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 ZNF804AQ7Z570 1209 aa19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 LUC7LQ9NQ29 371 aaKnown RBP19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 SPINK5Q9NQ38 1064 aaPredicted RBP19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 PARP3Q9Y6F1 533 aa19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 KIF24Q5T7B8 1368 aa19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 SHROOM2Q13796 1616 aa19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 MPHOSPH10O00566 681 aaKnown RBP19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 PHACTR3Q96KR7 559 aa19.63■□□□□ 0.73
PCDHA13-202ENST00000409494 PLBD2Q8NHP8 589 aa19.62■□□□□ 0.73
PCDHA13-202ENST00000409494 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.62■□□□□ 0.73
PCDHA13-202ENST00000409494 CHL1O00533 1208 aa19.62■□□□□ 0.73
PCDHA13-202ENST00000409494 TBC1D32Q96NH3 1257 aa19.62■□□□□ 0.73
PCDHA13-202ENST00000409494 SPATA31E1Q6ZUB1 1445 aa19.62■□□□□ 0.73
PCDHA13-202ENST00000409494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.62■□□□□ 0.73
PCDHA13-202ENST00000409494 CT47A1Q5JQC4 288 aaPredicted RBP19.62■□□□□ 0.73
PCDHA13-202ENST00000409494 CNNM2Q9H8M5 875 aa19.62■□□□□ 0.73
PCDHA13-202ENST00000409494 ANXA1P04083 346 aa19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 TMEM132AQ24JP5 1023 aa19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 AATKQ6ZMQ8 1374 aa19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 IFIT3O14879 490 aaKnown RBP19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 RANBP6O60518 1105 aaKnown RBP19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 TNMDQ9H2S6 317 aa19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 GNAT2P19087 354 aa19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 TRAPPC3LQ5T215 181 aa19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 NCOA7Q8NI08 942 aa19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 CUL5Q93034 780 aa19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 ATP7BP35670 1465 aa19.61■□□□□ 0.73
PCDHA13-202ENST00000409494 ANAPC15P60006 121 aa19.6■□□□□ 0.73
PCDHA13-202ENST00000409494 CCDC191Q8NCU4 936 aa19.6■□□□□ 0.73
PCDHA13-202ENST00000409494 KRT23Q9C075 422 aa19.6■□□□□ 0.73
PCDHA13-202ENST00000409494 SMC2O95347 1197 aa19.6■□□□□ 0.73
PCDHA13-202ENST00000409494 SLC52A2Q9HAB3 445 aa19.6■□□□□ 0.73
PCDHA13-202ENST00000409494 TFCP2L1Q9NZI6 479 aa19.6■□□□□ 0.73
PCDHA13-202ENST00000409494 KDM5AP29375 1690 aaKnown RBP19.6■□□□□ 0.73
PCDHA13-202ENST00000409494 ADCY10Q96PN6 1610 aa19.6■□□□□ 0.73
PCDHA13-202ENST00000409494 ERBB4Q15303 1308 aa19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 MFSD6Q6ZSS7 791 aa19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 STK11IPQ8N1F8 1099 aa19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 RDXP35241 583 aaKnown RBP19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 ODF2Q5BJF6 829 aa19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 TRIM5Q9C035 493 aa19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 IRS4O14654 1257 aaPredicted RBP19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 CBFA2T2O43439 604 aa19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 C8orf76Q96K31 380 aa19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 PYM1Q9BRP8 204 aaKnown RBP19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 DCTPP1Q9H773 170 aa19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 ZNHIT6Q9NWK9 470 aaKnown RBP19.59■□□□□ 0.73
PCDHA13-202ENST00000409494 CEP57L1Q8IYX8 460 aa19.58■□□□□ 0.73
PCDHA13-202ENST00000409494 TMEM94Q12767 1356 aa19.58■□□□□ 0.73
PCDHA13-202ENST00000409494 KIAA0232Q92628 1395 aa19.58■□□□□ 0.73
PCDHA13-202ENST00000409494 GNAQP50148 359 aa19.58■□□□□ 0.72
PCDHA13-202ENST00000409494 OGFOD1Q8N543 542 aa19.58■□□□□ 0.72
PCDHA13-202ENST00000409494 ZC3H12CQ9C0D7 883 aaKnown RBP19.58■□□□□ 0.72
PCDHA13-202ENST00000409494 STK32BQ9NY57 414 aa19.58■□□□□ 0.72
PCDHA13-202ENST00000409494 KDM5CP41229 1560 aa19.58■□□□□ 0.72
PCDHA13-202ENST00000409494 PDE1AP54750 535 aa19.57■□□□□ 0.72
PCDHA13-202ENST00000409494 SSRP1Q08945 709 aaKnown RBP19.57■□□□□ 0.72
PCDHA13-202ENST00000409494 C8orf34Q49A92 452 aa19.57■□□□□ 0.72
PCDHA13-202ENST00000409494 TET3O43151 1660 aa19.57■□□□□ 0.72
PCDHA13-202ENST00000409494 CERS3Q8IU89 383 aa19.57■□□□□ 0.72
PCDHA13-202ENST00000409494 CCAR2Q8N163 923 aaKnown RBP19.57■□□□□ 0.72
PCDHA13-202ENST00000409494 SH3TC1Q8TE82 1336 aa19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 GOLGA8AA7E2F4 631 aa19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 GOLGA8BA8MQT2 603 aa19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 NEK1Q96PY6 1258 aa19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 METTL22Q9BUU2 404 aaPredicted RBP19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 KDM4AO75164 1064 aa19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 MCM5P33992 734 aa19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 SYCP1Q15431 976 aa19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 RBM27Q9P2N5 1060 aaKnown RBP19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 PCDHB15Q9Y5E8 787 aa19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 SMTNL1A8MU46 457 aa19.56■□□□□ 0.72
PCDHA13-202ENST00000409494 RAD50Q92878 1312 aa19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 KIF1BO60333 1816 aa19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 KIF20AO95235 890 aa19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 CEBPZQ03701 1054 aaKnown RBP19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 CCNL1Q9UK58 526 aaPredicted RBP19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 ABCC3O15438 1527 aa19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 CCDC96Q2M329 555 aa19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 TMEM266Q2M3C6 531 aa19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 TBC1D9Q6ZT07 1266 aa19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 FLAD1Q8NFF5 587 aa19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 CFAP65Q6ZU64 1925 aaKnown RBP19.55■□□□□ 0.72
PCDHA13-202ENST00000409494 TSPY2A6NKD2 308 aa19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 MCMDC2Q4G0Z9 681 aa19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 TNPO1Q92973 898 aaKnown RBP19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 NUP62CLQ9H1M0 184 aa19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 TNNT3P45378 269 aaPredicted RBP19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 ESR2Q92731 530 aa19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 RBM17Q96I25 401 aaKnown RBP19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 UPF3BQ9BZI7 483 aaKnown RBP19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 NAA16Q6N069 864 aaPredicted RBP19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 CNKSR2Q8WXI2 1034 aa19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 KAT14Q9H8E8 782 aa19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 CCDC83Q8IWF9 413 aa19.54■□□□□ 0.72
PCDHA13-202ENST00000409494 CCDC194A0A1B0GVG4 234 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms