RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 HNRNPLLQ8WVV9 542 aaKnown RBP3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 RABGGTAQ92696 567 aa3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 ZNF830Q96NB3 372 aaPredicted RBP3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 ARID3AQ99856 593 aa3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 CDK19Q9BWU1 502 aa3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 UPF3BQ9BZI7 483 aaKnown RBP3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 KCNF1Q9H3M0 494 aa3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 HYPKQ9NX55 129 aa3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 DNAI1Q9UI46 699 aa3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 PYCARDQ9ULZ3 195 aa3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 NSFL1CQ9UNZ2 370 aaKnown RBP3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 MTMR6Q9Y217 621 aa3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 SNX14Q9Y5W7 946 aa3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 MRVI1Q9Y6F6 885 aa3.31□□□□□ -1.88
SNORD88.1-201ENST00000408684 CAMSAP1Q5T5Y3 1602 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 NPATQ14207 1427 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 SBNO1A3KN83 1393 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 A0A1W2PQ27 194 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 A0A1W2PQ64 194 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 A0A1W2PQD8 194 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC69A6NI79 296 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 ARHGAP6O43182 974 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 KIF1CO43896 1103 aaKnown RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 IFIT2P09913 472 aaKnown RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 CASTP20810 708 aaKnown RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 ACTN2P35609 894 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 MAGEA9P43362 315 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 PIP4K2AP48426 406 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 GTF2A1P52655 376 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 ETF1P62495 437 aaKnown RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 PIP4K2BP78356 416 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 FAM160A1Q05DH4 1040 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 TRDNQ13061 729 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 ZSCAN26Q16670 478 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 KMT5BQ4FZB7 885 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 ARHGAP29Q52LW3 1261 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 FOXD4L5Q5VV16 416 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 TMEM132EQ6IEE7 984 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 IQCEQ6IPM2 695 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC70Q6NSX1 233 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 SLC4A10Q6U841 1118 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 OLFM4Q6UX06 510 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 HDXQ7Z353 690 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC83Q8IWF9 413 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 EFCAB13Q8IY85 973 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 ELOA2Q8IYF1 753 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 C16orf71Q8IYS4 520 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 TSPYL6Q8N831 410 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 C8orf58Q8NAV2 365 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 RHPN1Q8TCX5 695 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 KCNG4Q8TDN1 519 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 LEO1Q8WVC0 666 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 FOXD4L4Q8WXT5 416 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 GOLGA1Q92805 767 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 RPGRIP1Q96KN7 1286 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 JAKMIP1Q96N16 626 aaKnown RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 PRAM1Q96QH2 718 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 MYCBPQ99417 103 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 MEIS3Q99687 375 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 NAA15Q9BXJ9 866 aaKnown RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 MED4Q9NPJ6 270 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 SNRKQ9NRH2 765 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 ECHDC1Q9NTX5 307 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 DACT1Q9NYF0 836 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 MYO1AQ9UBC5 1043 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 TSPYL4Q9UJ04 414 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 ZNF215Q9UL58 517 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC61Q9Y6R9 512 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 U3KPZ7 1027 aaPredicted RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 ARHGEF28Q8N1W1 1705 aaKnown RBP3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 PIK3C2BO00750 1634 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 MROH1Q8NDA8 1641 aa3.3□□□□□ -1.88
SNORD88.1-201ENST00000408684 KIF20BQ96Q89 1820 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 ELL2O00472 640 aaPredicted RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 STX10O60499 249 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 SURF6O75683 361 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 ALDH1L1O75891 902 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 DDX58O95786 925 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 PNMA6AP0CW24 399 aaPredicted RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 EIF5P55010 431 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 HNRNPH2P55795 449 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 RAD51AP2Q09MP3 1159 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 FLIIQ13045 1269 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 OS9Q13438 667 aaPredicted RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 MTX1Q13505 466 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 POLA2Q14181 598 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 SMC1AQ14683 1233 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 IQCB1Q15051 598 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 NECTIN1Q15223 517 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 SF3A1Q15459 793 aaKnown RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 ELF2Q15723 593 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 TTC31Q49AM3 519 aaPredicted RBP3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 CCDC93Q567U6 631 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 GORABQ5T7V8 394 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 ICE2Q659A1 982 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 ADALQ6DHV7 355 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 KANK3Q6NY19 840 aa3.29□□□□□ -1.88
SNORD88.1-201ENST00000408684 FBXO38Q6PIJ6 1188 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms