RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 LRSAM1Q6UWE0 723 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 PTF1AQ7RTS3 328 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 MTERF4Q7Z6M4 381 aaKnown RBP13.63□□□□□ -0.23
RCC1-204ENST00000398958 EDC3Q96F86 508 aaKnown RBP13.63□□□□□ -0.23
RCC1-204ENST00000398958 CWC22Q9HCG8 908 aaKnown RBP13.63□□□□□ -0.23
RCC1-204ENST00000398958 MCM5P33992 734 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 SASS6Q6UVJ0 657 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 DNAJC10Q8IXB1 793 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 RNF214Q8ND24 703 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 OSBPL3Q9H4L5 887 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 TMEM63CQ9P1W3 806 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 NBPF26B4DH59 902 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 NBPF14Q5TI25 921 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 NBPF10Q6P3W6 841 aaKnown RBP13.63□□□□□ -0.23
RCC1-204ENST00000398958 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 NBPF15Q8N660 670 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 TMOD3Q9NYL9 352 aa13.63□□□□□ -0.23
RCC1-204ENST00000398958 ROBO1Q9Y6N7 1651 aa13.62□□□□□ -0.23
RCC1-204ENST00000398958 FAM98CQ17RN3 349 aaKnown RBP13.62□□□□□ -0.23
RCC1-204ENST00000398958 KSR2Q6VAB6 950 aa13.62□□□□□ -0.23
RCC1-204ENST00000398958 PIGBQ92521 554 aa13.62□□□□□ -0.23
RCC1-204ENST00000398958 ZNF594Q96JF6 807 aaPredicted RBP13.62□□□□□ -0.23
RCC1-204ENST00000398958 FMNL2Q96PY5 1086 aa13.62□□□□□ -0.23
RCC1-204ENST00000398958 TBC1D2BQ9UPU7 963 aa13.62□□□□□ -0.23
RCC1-204ENST00000398958 PHRF1Q9P1Y6 1649 aaKnown RBP13.62□□□□□ -0.23
RCC1-204ENST00000398958 KCNQ2O43526 872 aa13.62□□□□□ -0.23
RCC1-204ENST00000398958 PTMAP06454 111 aaKnown RBP13.62□□□□□ -0.23
RCC1-204ENST00000398958 SNRPA1P09661 255 aaKnown RBP13.62□□□□□ -0.23
RCC1-204ENST00000398958 SMAP1Q8IYB5 467 aaPredicted RBP13.62□□□□□ -0.23
RCC1-204ENST00000398958 BABAM1Q9NWV8 329 aa13.62□□□□□ -0.23
RCC1-204ENST00000398958 TLR7Q9NYK1 1049 aaKnown RBP13.62□□□□□ -0.23
RCC1-204ENST00000398958 A0A087WZG4 1122 aa13.61□□□□□ -0.23
RCC1-204ENST00000398958 A0A0U1RQG5 324 aaPredicted RBP13.61□□□□□ -0.23
RCC1-204ENST00000398958 ST18O60284 1047 aa13.61□□□□□ -0.23
RCC1-204ENST00000398958 POLA2Q14181 598 aa13.61□□□□□ -0.23
RCC1-204ENST00000398958 PI4K2BQ8TCG2 481 aa13.61□□□□□ -0.23
RCC1-204ENST00000398958 PRDM10Q9NQV6 1147 aa13.61□□□□□ -0.23
RCC1-204ENST00000398958 NSFL1CQ9UNZ2 370 aaKnown RBP13.61□□□□□ -0.23
RCC1-204ENST00000398958 SLFNL1Q499Z3 407 aa13.61□□□□□ -0.23
RCC1-204ENST00000398958 CCDC24Q8N4L8 307 aa13.61□□□□□ -0.23
RCC1-204ENST00000398958 ZDHHC9Q9Y397 364 aa13.61□□□□□ -0.23
RCC1-204ENST00000398958 KAZALD1Q96I82 304 aa13.6□□□□□ -0.23
RCC1-204ENST00000398958 DDX21Q9NR30 783 aaKnown RBP eCLIP13.6□□□□□ -0.23
RCC1-204ENST00000398958 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
RCC1-204ENST00000398958 KIF1BPQ96EK5 621 aa13.6□□□□□ -0.23
RCC1-204ENST00000398958 NGLY1Q96IV0 654 aa13.6□□□□□ -0.23
RCC1-204ENST00000398958 AACSQ86V21 672 aa13.59□□□□□ -0.23
RCC1-204ENST00000398958 NEXNQ0ZGT2 675 aa13.59□□□□□ -0.23
RCC1-204ENST00000398958 DNTTIP2Q5QJE6 756 aaKnown RBP13.59□□□□□ -0.23
RCC1-204ENST00000398958 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
RCC1-204ENST00000398958 TMX3Q96JJ7 454 aa13.59□□□□□ -0.23
RCC1-204ENST00000398958 COL18A1P39060 1754 aa13.58□□□□□ -0.23
RCC1-204ENST00000398958 GRM8O00222 908 aa13.58□□□□□ -0.24
RCC1-204ENST00000398958 EXOC5O00471 708 aa13.58□□□□□ -0.24
RCC1-204ENST00000398958 BOLA2Q9H3K6 86 aa13.58□□□□□ -0.24
RCC1-204ENST00000398958 HYPKQ9NX55 129 aa13.58□□□□□ -0.24
RCC1-204ENST00000398958 STAP2Q9UGK3 403 aa13.58□□□□□ -0.24
RCC1-204ENST00000398958 CRYBG1Q9Y4K1 1723 aa13.57□□□□□ -0.24
RCC1-204ENST00000398958 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
RCC1-204ENST00000398958 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
RCC1-204ENST00000398958 IFIT2P09913 472 aaKnown RBP13.57□□□□□ -0.24
RCC1-204ENST00000398958 KIAA2012Q0VF49 1180 aa13.57□□□□□ -0.24
RCC1-204ENST00000398958 COL9A3Q14050 684 aaPredicted RBP13.57□□□□□ -0.24
RCC1-204ENST00000398958 KDM3BQ7LBC6 1761 aa13.57□□□□□ -0.24
RCC1-204ENST00000398958 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
RCC1-204ENST00000398958 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
RCC1-204ENST00000398958 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
RCC1-204ENST00000398958 HOXB7P09629 217 aa13.56□□□□□ -0.24
RCC1-204ENST00000398958 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
RCC1-204ENST00000398958 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
RCC1-204ENST00000398958 CARD10Q9BWT7 1032 aa13.56□□□□□ -0.24
RCC1-204ENST00000398958 NEURL1BA8MQ27 555 aa13.56□□□□□ -0.24
RCC1-204ENST00000398958 TOM1O60784 492 aa13.56□□□□□ -0.24
RCC1-204ENST00000398958 SASH1O94885 1247 aa13.56□□□□□ -0.24
RCC1-204ENST00000398958 MBD3O95983 291 aa13.56□□□□□ -0.24
RCC1-204ENST00000398958 LMBR1LQ6UX01 489 aa13.56□□□□□ -0.24
RCC1-204ENST00000398958 CLASRPQ8N2M8 674 aaKnown RBP13.56□□□□□ -0.24
RCC1-204ENST00000398958 EAF2Q96CJ1 260 aaPredicted RBP13.56□□□□□ -0.24
RCC1-204ENST00000398958 ZHX1Q9UKY1 873 aaPredicted RBP13.56□□□□□ -0.24
RCC1-204ENST00000398958 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.242e-7■□□□□ 8.2
RCC1-204ENST00000398958 RAB11FIP3O75154 756 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 PTH1RQ03431 593 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 MPNDQ8N594 471 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 CCDC94Q9BW85 323 aaPredicted RBP13.55□□□□□ -0.24
RCC1-204ENST00000398958 TSPY26PQ9H489 355 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 COL5A2P05997 1499 aaPredicted RBP13.55□□□□□ -0.24
RCC1-204ENST00000398958 HLFQ16534 295 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 LMO7Q8WWI1 1683 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 SNAP23O00161 211 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 GCKRQ14397 625 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 LINS1Q8NG48 757 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 FAM227BQ96M60 508 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 SLC4A9Q96Q91 983 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 CPDO75976 1380 aa13.55□□□□□ -0.24
RCC1-204ENST00000398958 MCCP23508 829 aa13.54□□□□□ -0.24
RCC1-204ENST00000398958 CNTROBQ8N137 903 aa13.54□□□□□ -0.24
RCC1-204ENST00000398958 TCEANC2Q96MN5 208 aa13.54□□□□□ -0.24
RCC1-204ENST00000398958 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
RCC1-204ENST00000398958 TIMM10P62072 90 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms