RNA–Protein interactions for RNA: ENST00000398646.3

FAM3B-202, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 5 BASIC

Gene FAM3B, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-202ENST00000398646 HLFQ16534 295 aa12.12□□□□□ -0.47
FAM3B-202ENST00000398646 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
FAM3B-202ENST00000398646 KAZALD1Q96I82 304 aa12.12□□□□□ -0.47
FAM3B-202ENST00000398646 LRRCC1Q9C099 1032 aa12.12□□□□□ -0.47
FAM3B-202ENST00000398646 CCNL1Q9UK58 526 aaPredicted RBP12.12□□□□□ -0.47
FAM3B-202ENST00000398646 ZNF831Q5JPB2 1677 aa12.12□□□□□ -0.47
FAM3B-202ENST00000398646 SBF2Q86WG5 1849 aa12.11□□□□□ -0.47
FAM3B-202ENST00000398646 COL15A1P39059 1388 aa12.11□□□□□ -0.47
FAM3B-202ENST00000398646 RXRBP28702 533 aa12.11□□□□□ -0.47
FAM3B-202ENST00000398646 CASP7P55210 303 aa12.11□□□□□ -0.47
FAM3B-202ENST00000398646 OS9Q13438 667 aaPredicted RBP12.11□□□□□ -0.47
FAM3B-202ENST00000398646 EPHA10Q5JZY3 1008 aa12.11□□□□□ -0.47
FAM3B-202ENST00000398646 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
FAM3B-202ENST00000398646 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
FAM3B-202ENST00000398646 RREB1Q92766 1687 aa12.1□□□□□ -0.47
FAM3B-202ENST00000398646 BRWD3Q6RI45 1802 aa12.1□□□□□ -0.47
FAM3B-202ENST00000398646 GPTP24298 496 aa12.1□□□□□ -0.47
FAM3B-202ENST00000398646 KCNQ4P56696 695 aa12.1□□□□□ -0.47
FAM3B-202ENST00000398646 C8orf34Q49A92 452 aa12.1□□□□□ -0.47
FAM3B-202ENST00000398646 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
FAM3B-202ENST00000398646 NOP58Q9Y2X3 529 aaKnown RBP12.1□□□□□ -0.47
FAM3B-202ENST00000398646 COL5A3P25940 1745 aaPredicted RBP12.09□□□□□ -0.47
FAM3B-202ENST00000398646 PCCAP05165 728 aaPredicted RBP12.09□□□□□ -0.47
FAM3B-202ENST00000398646 G3BP1Q13283 466 aaKnown RBP eCLIP12.09□□□□□ -0.47
FAM3B-202ENST00000398646 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
FAM3B-202ENST00000398646 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
FAM3B-202ENST00000398646 KIF1BPQ96EK5 621 aa12.09□□□□□ -0.47
FAM3B-202ENST00000398646 MYH14Q7Z406 1995 aaKnown RBP12.09□□□□□ -0.47
FAM3B-202ENST00000398646 TRIM37O94972 964 aa12.08□□□□□ -0.48
FAM3B-202ENST00000398646 CAMTA2O94983 1202 aa12.08□□□□□ -0.48
FAM3B-202ENST00000398646 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
FAM3B-202ENST00000398646 LMBR1LQ6UX01 489 aa12.08□□□□□ -0.48
FAM3B-202ENST00000398646 NLRP10Q86W26 655 aa12.08□□□□□ -0.48
FAM3B-202ENST00000398646 ERC1Q8IUD2 1116 aa12.08□□□□□ -0.48
FAM3B-202ENST00000398646 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
FAM3B-202ENST00000398646 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.48
FAM3B-202ENST00000398646 PA2G4Q9UQ80 394 aaKnown RBP12.08□□□□□ -0.48
FAM3B-202ENST00000398646 CHMP3Q9Y3E7 222 aa12.08□□□□□ -0.48
FAM3B-202ENST00000398646 LY75O60449 1722 aa12.07□□□□□ -0.48
FAM3B-202ENST00000398646 RPS6KA4O75676 772 aa12.07□□□□□ -0.48
FAM3B-202ENST00000398646 FOXO4P98177 505 aa12.07□□□□□ -0.48
FAM3B-202ENST00000398646 BMP2KLQ5H9B9 411 aa12.07□□□□□ -0.48
FAM3B-202ENST00000398646 ZNF34Q8IZ26 560 aa12.07□□□□□ -0.48
FAM3B-202ENST00000398646 OTUD7AQ8TE49 926 aaPredicted RBP12.07□□□□□ -0.48
FAM3B-202ENST00000398646 FAM89AQ96GI7 184 aa12.07□□□□□ -0.48
FAM3B-202ENST00000398646 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
FAM3B-202ENST00000398646 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
FAM3B-202ENST00000398646 NUP98P52948 1817 aa12.07□□□□□ -0.48
FAM3B-202ENST00000398646 ANKRD36CQ5JPF3 1778 aa12.06□□□□□ -0.48
FAM3B-202ENST00000398646 GNPATO15228 680 aa12.06□□□□□ -0.48
FAM3B-202ENST00000398646 RFX5P48382 616 aaPredicted RBP12.06□□□□□ -0.48
FAM3B-202ENST00000398646 PARP10Q53GL7 1025 aa12.06□□□□□ -0.48
FAM3B-202ENST00000398646 PLA2G12BQ9BX93 195 aa12.06□□□□□ -0.48
FAM3B-202ENST00000398646 COPRSQ9NQ92 184 aa12.06□□□□□ -0.48
FAM3B-202ENST00000398646 TRMT112Q9UI30 125 aaKnown RBP12.06□□□□□ -0.48
FAM3B-202ENST00000398646 RTCBQ9Y3I0 505 aaKnown RBP12.06□□□□□ -0.48
FAM3B-202ENST00000398646 CDHR2Q9BYE9 1310 aa12.06□□□□□ -0.48
FAM3B-202ENST00000398646 PTPN12Q05209 780 aaKnown RBP12.05□□□□□ -0.48
FAM3B-202ENST00000398646 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
FAM3B-202ENST00000398646 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
FAM3B-202ENST00000398646 AK7Q96M32 723 aa12.05□□□□□ -0.48
FAM3B-202ENST00000398646 SIL1Q9H173 461 aa12.05□□□□□ -0.48
FAM3B-202ENST00000398646 OSBPL3Q9H4L5 887 aa12.05□□□□□ -0.48
FAM3B-202ENST00000398646 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
FAM3B-202ENST00000398646 MX1P20591 662 aa12.04□□□□□ -0.48
FAM3B-202ENST00000398646 HMGB2P26583 209 aaKnown RBP12.04□□□□□ -0.48
FAM3B-202ENST00000398646 DSG3P32926 999 aa12.04□□□□□ -0.48
FAM3B-202ENST00000398646 PDE1AP54750 535 aa12.04□□□□□ -0.48
FAM3B-202ENST00000398646 SUSD4Q5VX71 490 aa12.04□□□□□ -0.48
FAM3B-202ENST00000398646 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
FAM3B-202ENST00000398646 NUTM1Q86Y26 1132 aa12.04□□□□□ -0.48
FAM3B-202ENST00000398646 CLASRPQ8N2M8 674 aaKnown RBP12.04□□□□□ -0.48
FAM3B-202ENST00000398646 KLHDC4Q8TBB5 520 aa12.04□□□□□ -0.48
FAM3B-202ENST00000398646 UTP14AQ9BVJ6 771 aaKnown RBP12.04□□□□□ -0.48
FAM3B-202ENST00000398646 NIP7Q9Y221 180 aaKnown RBP eCLIP12.04□□□□□ -0.48
FAM3B-202ENST00000398646 UBN2Q6ZU65 1347 aa12.04□□□□□ -0.48
FAM3B-202ENST00000398646 FAM177BA6PVY3 158 aa12.03□□□□□ -0.48
FAM3B-202ENST00000398646 RGL2O15211 777 aa12.03□□□□□ -0.48
FAM3B-202ENST00000398646 ZPR1O75312 459 aa12.03□□□□□ -0.48
FAM3B-202ENST00000398646 CCDC57Q2TAC2 916 aa12.03□□□□□ -0.48
FAM3B-202ENST00000398646 POTEAQ6S8J7 498 aa12.03□□□□□ -0.48
FAM3B-202ENST00000398646 SMIM5Q71RC9 77 aa12.03□□□□□ -0.48
FAM3B-202ENST00000398646 RGS17Q9UGC6 210 aaPredicted RBP12.03□□□□□ -0.48
FAM3B-202ENST00000398646 NARFQ9UHQ1 456 aa12.03□□□□□ -0.48
FAM3B-202ENST00000398646 SALL3Q9BXA9 1300 aa12.03□□□□□ -0.48
FAM3B-202ENST00000398646 TAF1LQ8IZX4 1826 aa12.02□□□□□ -0.48
FAM3B-202ENST00000398646 PDE8AO60658 829 aa12.02□□□□□ -0.49
FAM3B-202ENST00000398646 SASH1O94885 1247 aa12.02□□□□□ -0.49
FAM3B-202ENST00000398646 CSF1RP07333 972 aa12.02□□□□□ -0.49
FAM3B-202ENST00000398646 IFIT2P09913 472 aaKnown RBP12.02□□□□□ -0.49
FAM3B-202ENST00000398646 HSP90B1P14625 803 aaKnown RBP12.02□□□□□ -0.49
FAM3B-202ENST00000398646 GSPT1P15170 499 aaKnown RBP12.02□□□□□ -0.49
FAM3B-202ENST00000398646 TRAPPC3LQ5T215 181 aa12.02□□□□□ -0.49
FAM3B-202ENST00000398646 USPL1Q5W0Q7 1092 aa12.02□□□□□ -0.49
FAM3B-202ENST00000398646 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
FAM3B-202ENST00000398646 ARHGEF1Q92888 912 aaKnown RBP12.02□□□□□ -0.49
FAM3B-202ENST00000398646 LRRC4BQ9NT99 713 aa12.02□□□□□ -0.49
FAM3B-202ENST00000398646 STAP2Q9UGK3 403 aa12.02□□□□□ -0.49
FAM3B-202ENST00000398646 AOX1Q06278 1338 aa12.02□□□□□ -0.49
FAM3B-202ENST00000398646 SH3TC1Q8TE82 1336 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms