RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SECISBP2LQ93073 1101 aaKnown RBP5.99□□□□□ -1.45
SSR1-202ENST00000397511 BOLA2Q9H3K6 86 aa5.99□□□□□ -1.45
SSR1-202ENST00000397511 VPS37CA5D8V6 355 aaPredicted RBP5.98□□□□□ -1.45
SSR1-202ENST00000397511 IFIT2P09913 472 aaKnown RBP5.98□□□□□ -1.45
SSR1-202ENST00000397511 STK3Q13188 491 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 NRKQ7Z2Y5 1582 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 CABLES1Q8TDN4 633 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 FAM227BQ96M60 508 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 TLR7Q9NYK1 1049 aaKnown RBP5.98□□□□□ -1.45
SSR1-202ENST00000397511 SNX14Q9Y5W7 946 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 PIK3C2AO00443 1686 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 DIP2AQ14689 1571 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 GCP02774 474 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 SLFN14P0C7P3 912 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 CNTROBQ8N137 903 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 CLASRPQ8N2M8 674 aaKnown RBP5.98□□□□□ -1.45
SSR1-202ENST00000397511 KIF1BPQ96EK5 621 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 JAKMIP1Q96N16 626 aaKnown RBP5.98□□□□□ -1.45
SSR1-202ENST00000397511 TSPY26PQ9H489 355 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 SPTLC3Q9NUV7 552 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 TCHHQ07283 1943 aa5.98□□□□□ -1.45
SSR1-202ENST00000397511 BRD1O95696 1058 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 MBD3O95983 291 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 IP6K1Q92551 441 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 SGSM2O43147 1006 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 HSPA4P34932 840 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 RUFY3Q7L099 469 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 RIC3Q7Z5B4 369 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 ANKRD24Q8TF21 1146 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 TRIM34Q9BYJ4 488 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 BICC1Q9H694 974 aaKnown RBP5.97□□□□□ -1.45
SSR1-202ENST00000397511 NLRP2Q9NX02 1062 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 RGPD1P0DJD0 1748 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 FMN2Q9NZ56 1722 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 ATP5J2-PTCD1G3V325 749 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 TULP2O00295 520 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 RIOK3O14730 519 aaKnown RBP5.97□□□□□ -1.45
SSR1-202ENST00000397511 HTATSF1O43719 755 aaKnown RBP5.97□□□□□ -1.45
SSR1-202ENST00000397511 PTCD1O75127 700 aaKnown RBP5.97□□□□□ -1.45
SSR1-202ENST00000397511 FOSBP53539 338 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 CHRNA2Q15822 529 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 NFATC2IPQ8NCF5 419 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 SYAP1Q96A49 352 aaPredicted RBP5.97□□□□□ -1.45
SSR1-202ENST00000397511 DBF4Q9UBU7 674 aaPredicted RBP5.97□□□□□ -1.45
SSR1-202ENST00000397511 ZNF330Q9Y3S2 320 aaPredicted RBP5.97□□□□□ -1.45
SSR1-202ENST00000397511 TAF6LQ9Y6J9 622 aa5.97□□□□□ -1.45
SSR1-202ENST00000397511 CTIFO43310 598 aaKnown RBP5.96□□□□□ -1.46
SSR1-202ENST00000397511 CSB-PGBD3P0DP91 1061 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 SYT1P21579 422 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 FAM193AP78312 1265 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 SYCP1Q15431 976 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 TERF2Q15554 542 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 UVSSAQ2YD98 709 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 SUCLG2Q96I99 432 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 RNF216Q9NWF9 866 aaPredicted RBP5.96□□□□□ -1.46
SSR1-202ENST00000397511 STAP2Q9UGK3 403 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 SMC3Q9UQE7 1217 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 ADCY9O60503 1353 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 GIGYF1O75420 1035 aaPredicted RBP5.96□□□□□ -1.46
SSR1-202ENST00000397511 GJB2P29033 226 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 DNM1Q05193 864 aaKnown RBP5.96□□□□□ -1.46
SSR1-202ENST00000397511 SLFNL1Q499Z3 407 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 PLEKHO1Q53GL0 409 aaPredicted RBP5.96□□□□□ -1.46
SSR1-202ENST00000397511 C17orf53Q8N3J3 647 aaPredicted RBP5.96□□□□□ -1.46
SSR1-202ENST00000397511 FAM184AQ8NB25 1140 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 EAF2Q96CJ1 260 aaPredicted RBP5.96□□□□□ -1.46
SSR1-202ENST00000397511 LSG1Q9H089 658 aaKnown RBP5.96□□□□□ -1.46
SSR1-202ENST00000397511 USP25Q9UHP3 1055 aa5.96□□□□□ -1.46
SSR1-202ENST00000397511 RNMTO43148 476 aaKnown RBP5.95□□□□□ -1.46
SSR1-202ENST00000397511 PHF14O94880 888 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 HCLS1P14317 486 aaPredicted RBP5.95□□□□□ -1.46
SSR1-202ENST00000397511 CAMK4Q16566 473 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 GIMAP6Q6P9H5 292 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 CERS3Q8IU89 383 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 CREBRFQ8IUR6 639 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 FSD1Q9BTV5 496 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 CTNNA3Q9UI47 895 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 DDX41Q9UJV9 622 aaKnown RBP5.95□□□□□ -1.46
SSR1-202ENST00000397511 RAD50Q92878 1312 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 TOPAZ1Q8N9V7 1692 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 STX6O43752 255 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 RAB11FIP3O75154 756 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 TNNT3P45378 269 aaPredicted RBP5.95□□□□□ -1.46
SSR1-202ENST00000397511 MCM2P49736 904 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 G3BP1Q13283 466 aaKnown RBP eCLIP5.95□□□□□ -1.461e-9■□□□□ 8
SSR1-202ENST00000397511 CUL4AQ13619 759 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 POLA2Q14181 598 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 AKAP4Q5JQC9 854 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 ANKLE2Q86XL3 938 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 KRT222Q8N1A0 295 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 MYD88Q99836 296 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 LRRC2Q9BYS8 371 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 YY1AP1Q9H869 796 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 PDRG1Q9NUG6 133 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 MORC2Q9Y6X9 1032 aaPredicted RBP5.95□□□□□ -1.46
SSR1-202ENST00000397511 NALCNQ8IZF0 1738 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 RGPD2P0DJD1 1756 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 PXDNQ92626 1479 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 GLRX3O76003 335 aaKnown RBP5.95□□□□□ -1.46
SSR1-202ENST00000397511 SASH1O94885 1247 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms