RNA–Protein interactions for RNA: ENST00000397305.3

RBFOX2-204, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 5

Gene RBFOX2, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-204ENST00000397305 ZNF513Q8N8E2 541 aaPredicted RBP12.8□□□□□ -0.36
RBFOX2-204ENST00000397305 BORCS6Q96GS4 357 aa12.8□□□□□ -0.36
RBFOX2-204ENST00000397305 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
RBFOX2-204ENST00000397305 PTPRCP08575 1304 aa12.8□□□□□ -0.36
RBFOX2-204ENST00000397305 MYBPC2Q14324 1141 aa12.79□□□□□ -0.36
RBFOX2-204ENST00000397305 LRCH2Q5VUJ6 765 aa12.79□□□□□ -0.36
RBFOX2-204ENST00000397305 CCDC91Q7Z6B0 441 aa12.79□□□□□ -0.36
RBFOX2-204ENST00000397305 SDR16C5Q8N3Y7 309 aa12.79□□□□□ -0.36
RBFOX2-204ENST00000397305 UPF2Q9HAU5 1272 aaKnown RBP12.79□□□□□ -0.36
RBFOX2-204ENST00000397305 NUB1Q9Y5A7 615 aa12.79□□□□□ -0.36
RBFOX2-204ENST00000397305 KDM2BQ8NHM5 1336 aa12.79□□□□□ -0.36
RBFOX2-204ENST00000397305 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
RBFOX2-204ENST00000397305 COL22A1Q8NFW1 1626 aaPredicted RBP12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 CCDC196A0A1B0GTZ2 297 aa12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 DDX11L8A8MPP1 907 aa12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 MPHOSPH10O00566 681 aaKnown RBP12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 HOXB7P09629 217 aa12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 PHKG2P15735 406 aa12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 ZC3H12AQ5D1E8 599 aaKnown RBP12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 HDGFL1Q5TGJ6 251 aa12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 RASSF4Q9H2L5 321 aa12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 ABCC4O15439 1325 aa12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 PCDH11XQ9BZA7 1347 aa12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 PCDH11YQ9BZA8 1340 aa12.78□□□□□ -0.36
RBFOX2-204ENST00000397305 PKD1L3Q7Z443 1732 aa12.77□□□□□ -0.36
RBFOX2-204ENST00000397305 KDM3BQ7LBC6 1761 aa12.77□□□□□ -0.36
RBFOX2-204ENST00000397305 UBAP1LF5GYI3 381 aa12.77□□□□□ -0.37
RBFOX2-204ENST00000397305 IPO7O95373 1038 aaKnown RBP12.77□□□□□ -0.37
RBFOX2-204ENST00000397305 IL2RBP14784 551 aa12.77□□□□□ -0.37
RBFOX2-204ENST00000397305 MCM4P33991 863 aa12.77□□□□□ -0.37
RBFOX2-204ENST00000397305 GSCP56915 257 aaPredicted RBP12.77□□□□□ -0.37
RBFOX2-204ENST00000397305 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.37
RBFOX2-204ENST00000397305 DCAF5Q96JK2 942 aa12.77□□□□□ -0.37
RBFOX2-204ENST00000397305 EIF4A1P60842 406 aaKnown RBP12.76□□□□□ -0.37
RBFOX2-204ENST00000397305 SYCP1Q15431 976 aa12.76□□□□□ -0.37
RBFOX2-204ENST00000397305 ZNF710Q8N1W2 664 aa12.76□□□□□ -0.37
RBFOX2-204ENST00000397305 NECTIN2Q92692 538 aa12.76□□□□□ -0.37
RBFOX2-204ENST00000397305 BTG4Q9NY30 223 aa12.76□□□□□ -0.37
RBFOX2-204ENST00000397305 ANAPC4Q9UJX5 808 aa12.76□□□□□ -0.37
RBFOX2-204ENST00000397305 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
RBFOX2-204ENST00000397305 GOLGA6L6A8MZA4 724 aa12.75□□□□□ -0.37
RBFOX2-204ENST00000397305 GOLGA6L22H0YM25 854 aa12.75□□□□□ -0.37
RBFOX2-204ENST00000397305 SKOR2Q2VWA4 1001 aaPredicted RBP12.75□□□□□ -0.37
RBFOX2-204ENST00000397305 LARP1Q6PKG0 1096 aaKnown RBP12.75□□□□□ -0.37
RBFOX2-204ENST00000397305 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
RBFOX2-204ENST00000397305 TBC1D22AQ8WUA7 517 aa12.75□□□□□ -0.37
RBFOX2-204ENST00000397305 CALR3Q96L12 384 aaKnown RBP12.75□□□□□ -0.37
RBFOX2-204ENST00000397305 SLC52A2Q9HAB3 445 aa12.75□□□□□ -0.37
RBFOX2-204ENST00000397305 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
RBFOX2-204ENST00000397305 ADAMTS7Q9UKP4 1686 aa12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 COL16A1Q07092 1604 aaPredicted RBP12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 ANKRD33BA6NCL7 494 aa12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 EIF2S2P20042 333 aaKnown RBP12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 CABP4P57796 275 aa12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 FKBP5Q13451 457 aaPredicted RBP12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 FAM161AQ3B820 660 aa12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 SPTY2D1Q68D10 685 aaPredicted RBP12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 GOLGA6L1Q8N7Z2 621 aa12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 ARHGEF1Q92888 912 aaKnown RBP12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 CXorf56Q9H5V9 222 aa12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 RSPH14Q9UHP6 348 aa12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 SUFUQ9UMX1 484 aa12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 CACNA1FO60840 1977 aa12.74□□□□□ -0.37
RBFOX2-204ENST00000397305 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 TRAK2O60296 914 aa12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 IGHDP01880 384 aa12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 CCT4P50991 539 aaKnown RBP12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 FLIIQ13045 1269 aa12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 TERF2Q15554 542 aa12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 TACO1Q9BSH4 297 aaKnown RBP12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 ANTXR1Q9H6X2 564 aa12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 SUDS3Q9H7L9 328 aaPredicted RBP12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 ZBTB40Q9NUA8 1239 aa12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 ZKSCAN5Q9Y2L8 839 aa12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 PCDHB15Q9Y5E8 787 aa12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 SIPA1L3O60292 1781 aaPredicted RBP12.73□□□□□ -0.37
RBFOX2-204ENST00000397305 NUTM2BA6NNL0 878 aaPredicted RBP12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 NUTM2EB1AL46 878 aaPredicted RBP12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 CYP27B1O15528 508 aa12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 KCNQ3O43525 872 aa12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 ADAMTS2O95450 1211 aa12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 ZRSR2Q15696 482 aaKnown RBP12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 MUM1L1Q5H9M0 696 aa12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 SLC4A10Q6U841 1118 aa12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 ARMCX6Q7L4S7 300 aa12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 NUTM2AQ8IVF1 878 aaPredicted RBP12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 ANKRD7Q92527 254 aa12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 ZBTB9Q96C00 473 aa12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 NUCKS1Q9H1E3 243 aaKnown RBP12.72□□□□□ -0.37
RBFOX2-204ENST00000397305 CASQ1P31415 396 aa12.71□□□□□ -0.37
RBFOX2-204ENST00000397305 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
RBFOX2-204ENST00000397305 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.37
RBFOX2-204ENST00000397305 ERCC4Q92889 916 aaPredicted RBP12.71□□□□□ -0.37
RBFOX2-204ENST00000397305 TEX13AQ9BXU3 409 aaPredicted RBP12.71□□□□□ -0.37
RBFOX2-204ENST00000397305 MRC1P22897 1456 aa12.71□□□□□ -0.38
RBFOX2-204ENST00000397305 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
RBFOX2-204ENST00000397305 CD151P48509 253 aa12.7□□□□□ -0.38
RBFOX2-204ENST00000397305 ZNF790Q6PG37 636 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms