RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 ALDH1L1O75891 902 aa13.58□□□□□ -0.24
NUP98-205ENST00000397007 PHF14O94880 888 aa13.58□□□□□ -0.24
NUP98-205ENST00000397007 PRR5LQ6MZQ0 368 aa13.58□□□□□ -0.24
NUP98-205ENST00000397007 LINS1Q8NG48 757 aa13.58□□□□□ -0.24
NUP98-205ENST00000397007 PSDA5PKW4 1024 aaPredicted RBP13.57□□□□□ -0.24
NUP98-205ENST00000397007 PARP10Q53GL7 1025 aa13.57□□□□□ -0.24
NUP98-205ENST00000397007 RABL6Q3YEC7 729 aaPredicted RBP13.57□□□□□ -0.24
NUP98-205ENST00000397007 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
NUP98-205ENST00000397007 STK31Q9BXU1 1019 aa13.57□□□□□ -0.24
NUP98-205ENST00000397007 PCCAP05165 728 aaPredicted RBP13.56□□□□□ -0.24
NUP98-205ENST00000397007 GCKRQ14397 625 aa13.56□□□□□ -0.24
NUP98-205ENST00000397007 CSF1RP07333 972 aa13.55□□□□□ -0.24
NUP98-205ENST00000397007 KIF6Q6ZMV9 814 aa13.55□□□□□ -0.24
NUP98-205ENST00000397007 USP44Q9H0E7 712 aa13.55□□□□□ -0.24
NUP98-205ENST00000397007 FOXO4P98177 505 aa13.55□□□□□ -0.24
NUP98-205ENST00000397007 ZBTB38Q8NAP3 1195 aaPredicted RBP13.55□□□□□ -0.24
NUP98-205ENST00000397007 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
NUP98-205ENST00000397007 SMC4Q9NTJ3 1288 aa13.55□□□□□ -0.24
NUP98-205ENST00000397007 TCERG1O14776 1098 aaKnown RBP13.55□□□□□ -0.24
NUP98-205ENST00000397007 PDE3AQ14432 1141 aa13.55□□□□□ -0.24
NUP98-205ENST00000397007 C3orf67Q6ZVT6 689 aa13.55□□□□□ -0.24
NUP98-205ENST00000397007 ZNF652Q9Y2D9 606 aa13.54□□□□□ -0.24
NUP98-205ENST00000397007 UTRNP46939 3433 aa13.54□□□□□ -0.24
NUP98-205ENST00000397007 F6X3S4 739 aa13.54□□□□□ -0.24
NUP98-205ENST00000397007 HOXA10P31260 410 aaPredicted RBP13.54□□□□□ -0.24
NUP98-205ENST00000397007 ZPR1O75312 459 aa13.54□□□□□ -0.24
NUP98-205ENST00000397007 MMP10P09238 476 aa13.54□□□□□ -0.24
NUP98-205ENST00000397007 ZBTB7BO15156 539 aaPredicted RBP13.53□□□□□ -0.24
NUP98-205ENST00000397007 MTX1Q13505 466 aa13.53□□□□□ -0.24
NUP98-205ENST00000397007 CD2APQ9Y5K6 639 aa13.53□□□□□ -0.24
NUP98-205ENST00000397007 RRP1P56182 461 aaKnown RBP13.53□□□□□ -0.24
NUP98-205ENST00000397007 SF3B3Q15393 1217 aaKnown RBP13.53□□□□□ -0.24
NUP98-205ENST00000397007 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
NUP98-205ENST00000397007 API5Q9BZZ5 524 aaKnown RBP13.53□□□□□ -0.24
NUP98-205ENST00000397007 COL4A5P29400 1685 aa13.53□□□□□ -0.24
NUP98-205ENST00000397007 IRS2Q9Y4H2 1338 aa13.53□□□□□ -0.24
NUP98-205ENST00000397007 DDX58O95786 925 aaKnown RBP13.53□□□□□ -0.24
NUP98-205ENST00000397007 SERPINB2P05120 415 aa13.53□□□□□ -0.24
NUP98-205ENST00000397007 CHD4Q14839 1912 aa13.53□□□□□ -0.24
NUP98-205ENST00000397007 CWF19L2Q2TBE0 894 aaKnown RBP13.52□□□□□ -0.24
NUP98-205ENST00000397007 ANKRD44Q8N8A2 993 aa13.52□□□□□ -0.24
NUP98-205ENST00000397007 C7orf43Q8WVR3 580 aa13.52□□□□□ -0.24
NUP98-205ENST00000397007 DOCK2Q92608 1830 aa13.52□□□□□ -0.24
NUP98-205ENST00000397007 ZBTB7AO95365 584 aa13.52□□□□□ -0.25
NUP98-205ENST00000397007 C20orf194Q5TEA3 1177 aa13.52□□□□□ -0.25
NUP98-205ENST00000397007 ZKSCAN2Q63HK3 967 aa13.52□□□□□ -0.25
NUP98-205ENST00000397007 ZBTB22O15209 634 aa13.51□□□□□ -0.25
NUP98-205ENST00000397007 MYD88Q99836 296 aa13.51□□□□□ -0.25
NUP98-205ENST00000397007 BRIP1Q9BX63 1249 aa13.51□□□□□ -0.25
NUP98-205ENST00000397007 CCT4P50991 539 aaKnown RBP13.51□□□□□ -0.25
NUP98-205ENST00000397007 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
NUP98-205ENST00000397007 NIP7Q9Y221 180 aaKnown RBP eCLIP13.51□□□□□ -0.25
NUP98-205ENST00000397007 RFX5P48382 616 aaPredicted RBP13.51□□□□□ -0.25
NUP98-205ENST00000397007 ERFEQ4G0M1 354 aa13.51□□□□□ -0.25
NUP98-205ENST00000397007 MYH13Q9UKX3 1938 aa13.5□□□□□ -0.25
NUP98-205ENST00000397007 AIMP1Q12904 312 aaKnown RBP13.5□□□□□ -0.25
NUP98-205ENST00000397007 FKBP5Q13451 457 aaPredicted RBP13.5□□□□□ -0.25
NUP98-205ENST00000397007 SPON1Q9HCB6 807 aa13.5□□□□□ -0.25
NUP98-205ENST00000397007 TGFB2P61812 414 aa13.5□□□□□ -0.25
NUP98-205ENST00000397007 TMEM57Q8N5G2 664 aa13.5□□□□□ -0.25
NUP98-205ENST00000397007 CWC25Q9NXE8 425 aaPredicted RBP13.5□□□□□ -0.25
NUP98-205ENST00000397007 EPHA10Q5JZY3 1008 aa13.5□□□□□ -0.25
NUP98-205ENST00000397007 NYXQ9GZU5 481 aa13.5□□□□□ -0.25
NUP98-205ENST00000397007 AKAP11Q9UKA4 1901 aa13.5□□□□□ -0.25
NUP98-205ENST00000397007 NBPF7P0C2Y1 421 aaPredicted RBP13.49□□□□□ -0.25
NUP98-205ENST00000397007 SRGNP10124 158 aa13.49□□□□□ -0.25
NUP98-205ENST00000397007 MSL1Q68DK7 614 aa13.49□□□□□ -0.25
NUP98-205ENST00000397007 ZBTB40Q9NUA8 1239 aa13.49□□□□□ -0.25
NUP98-205ENST00000397007 SETDB2Q96T68 719 aa13.49□□□□□ -0.25
NUP98-205ENST00000397007 GRM8O00222 908 aa13.49□□□□□ -0.25
NUP98-205ENST00000397007 RIC3Q7Z5B4 369 aa13.49□□□□□ -0.25
NUP98-205ENST00000397007 UTP14AQ9BVJ6 771 aaKnown RBP13.49□□□□□ -0.25
NUP98-205ENST00000397007 MVPQ14764 893 aaKnown RBP13.48□□□□□ -0.25
NUP98-205ENST00000397007 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
NUP98-205ENST00000397007 ATP5J2-PTCD1G3V325 749 aa13.48□□□□□ -0.25
NUP98-205ENST00000397007 SH3TC1Q8TE82 1336 aa13.48□□□□□ -0.25
NUP98-205ENST00000397007 ARXQ96QS3 562 aa13.48□□□□□ -0.25
NUP98-205ENST00000397007 SCN9AQ15858 1988 aa13.47□□□□□ -0.25
NUP98-205ENST00000397007 IPO8O15397 1037 aaKnown RBP13.47□□□□□ -0.25
NUP98-205ENST00000397007 POLA2Q14181 598 aa13.47□□□□□ -0.25
NUP98-205ENST00000397007 STYK1Q6J9G0 422 aa13.47□□□□□ -0.25
NUP98-205ENST00000397007 PPP1R42Q7Z4L9 355 aa13.47□□□□□ -0.25
NUP98-205ENST00000397007 SRCIN1Q9C0H9 1055 aa13.47□□□□□ -0.25
NUP98-205ENST00000397007 DZIP1LQ8IYY4 767 aaKnown RBP13.47□□□□□ -0.25
NUP98-205ENST00000397007 ADAMTSL1Q8N6G6 1762 aa13.47□□□□□ -0.25
NUP98-205ENST00000397007 ZNF609O15014 1411 aa13.47□□□□□ -0.25
NUP98-205ENST00000397007 TTLL11Q8NHH1 800 aa13.46□□□□□ -0.25
NUP98-205ENST00000397007 SUCLG2Q96I99 432 aa13.46□□□□□ -0.25
NUP98-205ENST00000397007 YTHDC1Q96MU7 727 aaKnown RBP13.46□□□□□ -0.25
NUP98-205ENST00000397007 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.25
NUP98-205ENST00000397007 ECM29Q5VYK3 1845 aa13.46□□□□□ -0.25
NUP98-205ENST00000397007 MEIS3Q99687 375 aa13.45□□□□□ -0.26
NUP98-205ENST00000397007 PARP3Q9Y6F1 533 aa13.45□□□□□ -0.26
NUP98-205ENST00000397007 MAST2Q6P0Q8 1798 aa13.45□□□□□ -0.26
NUP98-205ENST00000397007 GPTP24298 496 aa13.45□□□□□ -0.26
NUP98-205ENST00000397007 SIRT2Q8IXJ6 389 aa13.45□□□□□ -0.26
NUP98-205ENST00000397007 CNBD1Q8NA66 436 aa13.45□□□□□ -0.26
NUP98-205ENST00000397007 CRAMP1Q96RY5 1269 aa13.45□□□□□ -0.26
NUP98-205ENST00000397007 TPTE2Q6XPS3 522 aa13.45□□□□□ -0.26
NUP98-205ENST00000397007 NLGN2Q8NFZ4 835 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms