RNA–Protein interactions for RNA: ENST00000396735.6

PPM1N-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best) BASIC

Gene PPM1N, Length 895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-201ENST00000396735 IFT57Q9NWB7 429 aa17.87■□□□□ 0.45
PPM1N-201ENST00000396735 KDM2BQ8NHM5 1336 aa17.87■□□□□ 0.45
PPM1N-201ENST00000396735 LTBP3Q9NS15 1303 aa17.87■□□□□ 0.45
PPM1N-201ENST00000396735 TOMM70O94826 608 aa17.86■□□□□ 0.45
PPM1N-201ENST00000396735 NLRP10Q86W26 655 aa17.86■□□□□ 0.45
PPM1N-201ENST00000396735 MRS2Q9HD23 443 aa17.86■□□□□ 0.45
PPM1N-201ENST00000396735 GLTPD2A6NH11 291 aa17.85■□□□□ 0.45
PPM1N-201ENST00000396735 HOXB7P09629 217 aa17.85■□□□□ 0.45
PPM1N-201ENST00000396735 HSPA6P17066 643 aa17.85■□□□□ 0.45
PPM1N-201ENST00000396735 DDX60Q8IY21 1712 aaKnown RBP17.85■□□□□ 0.45
PPM1N-201ENST00000396735 ZC3H4Q9UPT8 1303 aaKnown RBP17.85■□□□□ 0.45
PPM1N-201ENST00000396735 TAF1P21675 1872 aa17.84■□□□□ 0.45
PPM1N-201ENST00000396735 WDR90Q96KV7 1748 aa17.84■□□□□ 0.45
PPM1N-201ENST00000396735 COL4A5P29400 1685 aa17.84■□□□□ 0.45
PPM1N-201ENST00000396735 POTECB2RU33 542 aa17.84■□□□□ 0.45
PPM1N-201ENST00000396735 HOXA10P31260 410 aaPredicted RBP17.84■□□□□ 0.45
PPM1N-201ENST00000396735 GNAI1P63096 354 aa17.84■□□□□ 0.45
PPM1N-201ENST00000396735 TCIRG1Q13488 830 aa17.84■□□□□ 0.45
PPM1N-201ENST00000396735 PARP10Q53GL7 1025 aa17.84■□□□□ 0.45
PPM1N-201ENST00000396735 CCDC93Q567U6 631 aa17.84■□□□□ 0.45
PPM1N-201ENST00000396735 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
PPM1N-201ENST00000396735 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
PPM1N-201ENST00000396735 ZNF277Q9NRM2 450 aaPredicted RBP17.84■□□□□ 0.45
PPM1N-201ENST00000396735 COL4A1P02462 1669 aa17.83■□□□□ 0.45
PPM1N-201ENST00000396735 ANP32CO43423 234 aa17.83■□□□□ 0.44
PPM1N-201ENST00000396735 PPP1R42Q7Z4L9 355 aa17.83■□□□□ 0.44
PPM1N-201ENST00000396735 TSPYL6Q8N831 410 aa17.83■□□□□ 0.44
PPM1N-201ENST00000396735 PHAXQ9H814 394 aaKnown RBP17.83■□□□□ 0.44
PPM1N-201ENST00000396735 DBF4Q9UBU7 674 aaPredicted RBP17.83■□□□□ 0.44
PPM1N-201ENST00000396735 ATP5J2-PTCD1G3V325 749 aa17.82■□□□□ 0.44
PPM1N-201ENST00000396735 TCERG1O14776 1098 aaKnown RBP17.82■□□□□ 0.44
PPM1N-201ENST00000396735 HCLS1P14317 486 aaPredicted RBP17.82■□□□□ 0.44
PPM1N-201ENST00000396735 ALDH1B1P30837 517 aa17.82■□□□□ 0.44
PPM1N-201ENST00000396735 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.44
PPM1N-201ENST00000396735 SOGA3Q5TF21 947 aa17.82■□□□□ 0.44
PPM1N-201ENST00000396735 PLBD2Q8NHP8 589 aa17.82■□□□□ 0.44
PPM1N-201ENST00000396735 RPGRQ92834 1020 aaKnown RBP17.82■□□□□ 0.44
PPM1N-201ENST00000396735 SLC10A5Q5PT55 438 aa17.81■□□□□ 0.44
PPM1N-201ENST00000396735 ANKRD13DQ6ZTN6 518 aa17.81■□□□□ 0.44
PPM1N-201ENST00000396735 POTEDQ86YR6 584 aa17.81■□□□□ 0.44
PPM1N-201ENST00000396735 WWC1Q8IX03 1113 aa17.81■□□□□ 0.44
PPM1N-201ENST00000396735 RBM46Q8TBY0 533 aaKnown RBP17.81■□□□□ 0.44
PPM1N-201ENST00000396735 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
PPM1N-201ENST00000396735 DDNO94850 711 aaPredicted RBP17.8■□□□□ 0.44
PPM1N-201ENST00000396735 CALD1Q05682 793 aaKnown RBP17.8■□□□□ 0.44
PPM1N-201ENST00000396735 ISCA1Q9BUE6 129 aa17.8■□□□□ 0.44
PPM1N-201ENST00000396735 ABCC4O15439 1325 aa17.79■□□□□ 0.44
PPM1N-201ENST00000396735 ZNF541Q9H0D2 1346 aa17.79■□□□□ 0.44
PPM1N-201ENST00000396735 HTRA3P83110 453 aa17.79■□□□□ 0.44
PPM1N-201ENST00000396735 HSP90AB3PQ58FF7 597 aa17.79■□□□□ 0.44
PPM1N-201ENST00000396735 C16orf71Q8IYS4 520 aaPredicted RBP17.79■□□□□ 0.44
PPM1N-201ENST00000396735 CRAMP1Q96RY5 1269 aa17.79■□□□□ 0.44
PPM1N-201ENST00000396735 HYPKQ9NX55 129 aa17.79■□□□□ 0.44
PPM1N-201ENST00000396735 TRMT112Q9UI30 125 aaKnown RBP17.79■□□□□ 0.44
PPM1N-201ENST00000396735 SALL2Q9Y467 1007 aaPredicted RBP17.79■□□□□ 0.44
PPM1N-201ENST00000396735 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
PPM1N-201ENST00000396735 VEGFAP15692 232 aaPredicted RBP17.78■□□□□ 0.44
PPM1N-201ENST00000396735 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
PPM1N-201ENST00000396735 RTKN2Q8IZC4 609 aa17.78■□□□□ 0.44
PPM1N-201ENST00000396735 RBM17Q96I25 401 aaKnown RBP17.78■□□□□ 0.44
PPM1N-201ENST00000396735 NLRP3Q96P20 1036 aa17.78■□□□□ 0.44
PPM1N-201ENST00000396735 NCBP3Q53F19 620 aaKnown RBP17.77■□□□□ 0.44
PPM1N-201ENST00000396735 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.44
PPM1N-201ENST00000396735 FAM89AQ96GI7 184 aa17.77■□□□□ 0.44
PPM1N-201ENST00000396735 SH3TC1Q8TE82 1336 aa17.76■□□□□ 0.43
PPM1N-201ENST00000396735 POTEIP0CG38 1075 aa17.76■□□□□ 0.43
PPM1N-201ENST00000396735 POTEJP0CG39 1038 aa17.76■□□□□ 0.43
PPM1N-201ENST00000396735 IARSP41252 1262 aaKnown RBP17.76■□□□□ 0.43
PPM1N-201ENST00000396735 RNF123Q5XPI4 1314 aa17.75■□□□□ 0.43
PPM1N-201ENST00000396735 DPY19L2Q6NUT2 758 aa17.75■□□□□ 0.43
PPM1N-201ENST00000396735 PSMD1Q99460 953 aa17.75■□□□□ 0.43
PPM1N-201ENST00000396735 FSTL1Q12841 308 aa17.74■□□□□ 0.43
PPM1N-201ENST00000396735 JARID2Q92833 1246 aaPredicted RBP17.74■□□□□ 0.43
PPM1N-201ENST00000396735 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
PPM1N-201ENST00000396735 DUOX1Q9NRD9 1551 aa17.74■□□□□ 0.43
PPM1N-201ENST00000396735 LRRC37AA6NMS7 1700 aa17.73■□□□□ 0.43
PPM1N-201ENST00000396735 GOLGA2Q08379 1002 aa17.73■□□□□ 0.43
PPM1N-201ENST00000396735 G2E3Q7L622 706 aa17.73■□□□□ 0.43
PPM1N-201ENST00000396735 RIC3Q7Z5B4 369 aa17.73■□□□□ 0.43
PPM1N-201ENST00000396735 FAM9BQ8IZU0 186 aa17.73■□□□□ 0.43
PPM1N-201ENST00000396735 MYD88Q99836 296 aa17.73■□□□□ 0.43
PPM1N-201ENST00000396735 ATP6V0A2Q9Y487 856 aa17.73■□□□□ 0.43
PPM1N-201ENST00000396735 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
PPM1N-201ENST00000396735 LTBP1Q14766 1721 aa17.72■□□□□ 0.43
PPM1N-201ENST00000396735 FZD9O00144 591 aa17.72■□□□□ 0.43
PPM1N-201ENST00000396735 APLP1P51693 650 aa17.72■□□□□ 0.43
PPM1N-201ENST00000396735 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
PPM1N-201ENST00000396735 DNAJC5GQ8N7S2 189 aa17.72■□□□□ 0.43
PPM1N-201ENST00000396735 SMC1BQ8NDV3 1235 aa17.72■□□□□ 0.43
PPM1N-201ENST00000396735 IL16Q14005 1332 aa17.72■□□□□ 0.43
PPM1N-201ENST00000396735 SCN4AP35499 1836 aa17.71■□□□□ 0.43
PPM1N-201ENST00000396735 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
PPM1N-201ENST00000396735 TWISTNBQ3B726 338 aaPredicted RBP17.71■□□□□ 0.43
PPM1N-201ENST00000396735 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.43
PPM1N-201ENST00000396735 GRAPQ13588 217 aa17.7■□□□□ 0.42
PPM1N-201ENST00000396735 GRAPLQ8TC17 118 aaPredicted RBP17.7■□□□□ 0.42
PPM1N-201ENST00000396735 CELF1Q92879 486 aaKnown RBP17.7■□□□□ 0.42
PPM1N-201ENST00000396735 L3MBTL3Q96JM7 780 aaPredicted RBP17.7■□□□□ 0.42
PPM1N-201ENST00000396735 MAP3K2Q9Y2U5 619 aa17.7■□□□□ 0.42
PPM1N-201ENST00000396735 ADAMTSL1Q8N6G6 1762 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms