RNA–Protein interactions for RNA: ENST00000395418.7

IFT20-203, Transcript of intraflagellar transport 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene IFT20, Length 825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-203ENST00000395418 NUDCQ9Y266 331 aa20.4■□□□□ 0.86
IFT20-203ENST00000395418 THSD7BQ9C0I4 1608 aa20.39■□□□□ 0.86
IFT20-203ENST00000395418 U2AF1L5P0DN76 240 aaPredicted RBP20.39■□□□□ 0.85
IFT20-203ENST00000395418 LMOD1P29536 600 aaPredicted RBP20.39■□□□□ 0.85
IFT20-203ENST00000395418 U2AF1Q01081 240 aaKnown RBP eCLIP20.39■□□□□ 0.853e-7■■■■■ 27.9
IFT20-203ENST00000395418 CRY2Q49AN0 593 aa20.39■□□□□ 0.85
IFT20-203ENST00000395418 NYXQ9GZU5 481 aa20.39■□□□□ 0.85
IFT20-203ENST00000395418 KDM3BQ7LBC6 1761 aa20.39■□□□□ 0.85
IFT20-203ENST00000395418 ABCC12Q96J65 1359 aa20.38■□□□□ 0.85
IFT20-203ENST00000395418 CC2D2BQ6DHV5 1058 aa20.38■□□□□ 0.85
IFT20-203ENST00000395418 PAXIP1Q6ZW49 1069 aaPredicted RBP20.38■□□□□ 0.85
IFT20-203ENST00000395418 MIS18AQ9NYP9 233 aa20.38■□□□□ 0.85
IFT20-203ENST00000395418 EPS15P42566 896 aa20.37■□□□□ 0.85
IFT20-203ENST00000395418 GRM1Q13255 1194 aa20.37■□□□□ 0.85
IFT20-203ENST00000395418 TAF7Q15545 349 aaPredicted RBP20.37■□□□□ 0.85
IFT20-203ENST00000395418 RPGRQ92834 1020 aaKnown RBP20.37■□□□□ 0.85
IFT20-203ENST00000395418 SCNN1DP51172 638 aa20.36■□□□□ 0.85
IFT20-203ENST00000395418 FAM161AQ3B820 660 aa20.36■□□□□ 0.85
IFT20-203ENST00000395418 LARGE2Q8N3Y3 721 aa20.36■□□□□ 0.85
IFT20-203ENST00000395418 CAPNS2Q96L46 248 aa20.36■□□□□ 0.85
IFT20-203ENST00000395418 TCERG1O14776 1098 aaKnown RBP20.35■□□□□ 0.85
IFT20-203ENST00000395418 HTATSF1O43719 755 aaKnown RBP20.35■□□□□ 0.85
IFT20-203ENST00000395418 CYP4F22Q6NT55 531 aa20.35■□□□□ 0.85
IFT20-203ENST00000395418 BEGAINQ9BUH8 593 aa20.35■□□□□ 0.85
IFT20-203ENST00000395418 CASP8AP2Q9UKL3 1982 aa20.35■□□□□ 0.85
IFT20-203ENST00000395418 ERVV-1B6SEH8 477 aa20.34■□□□□ 0.85
IFT20-203ENST00000395418 ECE1P42892 770 aa20.34■□□□□ 0.85
IFT20-203ENST00000395418 GPR101Q96P66 508 aaPredicted RBP20.34■□□□□ 0.85
IFT20-203ENST00000395418 RRP7AQ9Y3A4 280 aaKnown RBP20.34■□□□□ 0.85
IFT20-203ENST00000395418 MAP3K15Q6ZN16 1313 aa20.33■□□□□ 0.85
IFT20-203ENST00000395418 TRAF5O00463 557 aa20.33■□□□□ 0.85
IFT20-203ENST00000395418 GPTP24298 496 aa20.33■□□□□ 0.85
IFT20-203ENST00000395418 HOXA10P31260 410 aaPredicted RBP20.33■□□□□ 0.85
IFT20-203ENST00000395418 GRIPAP1Q4V328 841 aa20.33■□□□□ 0.85
IFT20-203ENST00000395418 CST9Q5W186 159 aa20.33■□□□□ 0.85
IFT20-203ENST00000395418 TTLL7Q6ZT98 887 aa20.33■□□□□ 0.85
IFT20-203ENST00000395418 USP50Q70EL3 339 aaPredicted RBP20.33■□□□□ 0.85
IFT20-203ENST00000395418 SLC51AQ86UW1 340 aa20.33■□□□□ 0.85
IFT20-203ENST00000395418 CCDC85CA6NKD9 419 aa20.32■□□□□ 0.84
IFT20-203ENST00000395418 KIF6Q6ZMV9 814 aa20.32■□□□□ 0.84
IFT20-203ENST00000395418 RBM17Q96I25 401 aaKnown RBP20.32■□□□□ 0.84
IFT20-203ENST00000395418 LAMB2P55268 1798 aa20.31■□□□□ 0.84
IFT20-203ENST00000395418 UBN2Q6ZU65 1347 aa20.31■□□□□ 0.84
IFT20-203ENST00000395418 RIC1Q4ADV7 1423 aa20.31■□□□□ 0.84
IFT20-203ENST00000395418 PPEF1O14829 653 aaPredicted RBP20.31■□□□□ 0.84
IFT20-203ENST00000395418 MYL6BP14649 208 aa20.31■□□□□ 0.84
IFT20-203ENST00000395418 SUSD4Q5VX71 490 aa20.31■□□□□ 0.84
IFT20-203ENST00000395418 NIM1KQ8IY84 436 aa20.31■□□□□ 0.84
IFT20-203ENST00000395418 CRAMP1Q96RY5 1269 aa20.31■□□□□ 0.84
IFT20-203ENST00000395418 ZBTB3Q9H5J0 574 aa20.31■□□□□ 0.84
IFT20-203ENST00000395418 SLC34A2O95436 690 aa20.3■□□□□ 0.84
IFT20-203ENST00000395418 PPP2R1AP30153 589 aa20.3■□□□□ 0.84
IFT20-203ENST00000395418 TSKSQ9UJT2 592 aa20.3■□□□□ 0.84
IFT20-203ENST00000395418 TLL2Q9Y6L7 1015 aa20.3■□□□□ 0.84
IFT20-203ENST00000395418 TAF1P21675 1872 aa20.29■□□□□ 0.84
IFT20-203ENST00000395418 PPIP5K2O43314 1243 aa20.29■□□□□ 0.84
IFT20-203ENST00000395418 AOC2O75106 756 aa20.29■□□□□ 0.84
IFT20-203ENST00000395418 IBTKQ9P2D0 1353 aaPredicted RBP20.29■□□□□ 0.84
IFT20-203ENST00000395418 AOC3Q16853 763 aa20.28■□□□□ 0.84
IFT20-203ENST00000395418 POLR2AP24928 1970 aaKnown RBP20.28■□□□□ 0.84
IFT20-203ENST00000395418 ANKRD36CQ5JPF3 1778 aa20.27■□□□□ 0.84
IFT20-203ENST00000395418 NTSR2O95665 410 aa20.27■□□□□ 0.84
IFT20-203ENST00000395418 EIF4A1P60842 406 aaKnown RBP20.27■□□□□ 0.84
IFT20-203ENST00000395418 MLLT1Q03111 559 aaPredicted RBP20.27■□□□□ 0.84
IFT20-203ENST00000395418 C3orf67Q6ZVT6 689 aa20.27■□□□□ 0.84
IFT20-203ENST00000395418 ZNF34Q8IZ26 560 aa20.27■□□□□ 0.84
IFT20-203ENST00000395418 PNISRQ8TF01 805 aaKnown RBP20.27■□□□□ 0.84
IFT20-203ENST00000395418 TMX4Q9H1E5 349 aaPredicted RBP20.27■□□□□ 0.84
IFT20-203ENST00000395418 ADARB2Q9NS39 739 aaKnown RBP20.27■□□□□ 0.84
IFT20-203ENST00000395418 GPRC5DQ9NZD1 345 aa20.27■□□□□ 0.84
IFT20-203ENST00000395418 MAP2K2P36507 400 aa20.26■□□□□ 0.83
IFT20-203ENST00000395418 CXCL9Q07325 125 aa20.25■□□□□ 0.83
IFT20-203ENST00000395418 GIGYF2Q6Y7W6 1299 aaKnown RBP20.25■□□□□ 0.83
IFT20-203ENST00000395418 PPP1R42Q7Z4L9 355 aa20.25■□□□□ 0.83
IFT20-203ENST00000395418 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
IFT20-203ENST00000395418 CELF2O95319 508 aaKnown RBP20.24■□□□□ 0.83
IFT20-203ENST00000395418 NEFMP07197 916 aa20.24■□□□□ 0.83
IFT20-203ENST00000395418 RGS19P49795 217 aa20.24■□□□□ 0.83
IFT20-203ENST00000395418 SAPCD2Q86UD0 394 aa20.24■□□□□ 0.83
IFT20-203ENST00000395418 VPS33BQ9H267 617 aa20.24■□□□□ 0.83
IFT20-203ENST00000395418 ATP6V0A2Q9Y487 856 aa20.24■□□□□ 0.83
IFT20-203ENST00000395418 GLIS2Q9BZE0 524 aaPredicted RBP20.23■□□□□ 0.83
IFT20-203ENST00000395418 ZNRF3Q9ULT6 936 aa20.23■□□□□ 0.83
IFT20-203ENST00000395418 GMPSP49915 693 aaPredicted RBP20.22■□□□□ 0.83
IFT20-203ENST00000395418 SUPT20HQ8NEM7 779 aa20.22■□□□□ 0.83
IFT20-203ENST00000395418 CFAP44Q96MT7 982 aa20.22■□□□□ 0.83
IFT20-203ENST00000395418 THUMPD2Q9BTF0 503 aaKnown RBP20.22■□□□□ 0.83
IFT20-203ENST00000395418 PARP10Q53GL7 1025 aa20.21■□□□□ 0.83
IFT20-203ENST00000395418 ZNF408Q9H9D4 720 aa20.21■□□□□ 0.83
IFT20-203ENST00000395418 ABCC4O15439 1325 aa20.21■□□□□ 0.83
IFT20-203ENST00000395418 CIAPIN1Q6FI81 312 aa20.2■□□□□ 0.82
IFT20-203ENST00000395418 UTP14AQ9BVJ6 771 aaKnown RBP20.2■□□□□ 0.82
IFT20-203ENST00000395418 BCL2L13Q9BXK5 485 aa20.2■□□□□ 0.82
IFT20-203ENST00000395418 RTFDC1Q9BY42 306 aaPredicted RBP20.2■□□□□ 0.82
IFT20-203ENST00000395418 MCOLN1Q9GZU1 580 aa20.2■□□□□ 0.82
IFT20-203ENST00000395418 PGAP2Q9UHJ9 254 aa20.2■□□□□ 0.82
IFT20-203ENST00000395418 CA12O43570 354 aa20.19■□□□□ 0.82
IFT20-203ENST00000395418 SLC10A5Q5PT55 438 aa20.19■□□□□ 0.82
IFT20-203ENST00000395418 DPP8Q6V1X1 898 aaPredicted RBP20.19■□□□□ 0.82
IFT20-203ENST00000395418 HHIPL1Q96JK4 782 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms