RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 GPR162Q16538 588 aa25.45■■□□□ 1.66
SNCA-203ENST00000394986 SYNE4Q8N205 404 aa25.45■■□□□ 1.66
SNCA-203ENST00000394986 PDE6BP35913 854 aa25.44■■□□□ 1.66
SNCA-203ENST00000394986 TRMT112Q9UI30 125 aaKnown RBP25.44■■□□□ 1.66
SNCA-203ENST00000394986 TNRC6CQ9HCJ0 1690 aaKnown RBP25.43■■□□□ 1.66
SNCA-203ENST00000394986 F6X3S4 739 aa25.43■■□□□ 1.66
SNCA-203ENST00000394986 SMC4Q9NTJ3 1288 aa25.43■■□□□ 1.66
SNCA-203ENST00000394986 H0YIN7 160 aa25.42■■□□□ 1.66
SNCA-203ENST00000394986 IGKV5-2P06315 115 aa25.42■■□□□ 1.66
SNCA-203ENST00000394986 CT47B1P0C2W7 299 aaPredicted RBP25.42■■□□□ 1.66
SNCA-203ENST00000394986 DNAAF4Q8WXU2 420 aa25.42■■□□□ 1.66
SNCA-203ENST00000394986 GOLGB1Q14789 3259 aaKnown RBP25.42■■□□□ 1.66
SNCA-203ENST00000394986 COL11A2P13942 1736 aaPredicted RBP25.41■■□□□ 1.66
SNCA-203ENST00000394986 TRIM28Q13263 835 aaKnown RBP25.41■■□□□ 1.66
SNCA-203ENST00000394986 ALDH1L2Q3SY69 923 aa25.41■■□□□ 1.66
SNCA-203ENST00000394986 RTL5Q5HYW3 569 aaPredicted RBP25.41■■□□□ 1.66
SNCA-203ENST00000394986 BCS1LQ9Y276 419 aa25.41■■□□□ 1.66
SNCA-203ENST00000394986 CWF19L2Q2TBE0 894 aaKnown RBP25.4■■□□□ 1.66
SNCA-203ENST00000394986 C3orf67Q6ZVT6 689 aa25.4■■□□□ 1.66
SNCA-203ENST00000394986 YTHDC1Q96MU7 727 aaKnown RBP25.4■■□□□ 1.66
SNCA-203ENST00000394986 PIM2Q9P1W9 311 aa25.4■■□□□ 1.66
SNCA-203ENST00000394986 DCAF8L1A6NGE4 600 aa25.39■■□□□ 1.66
SNCA-203ENST00000394986 HCLS1P14317 486 aaPredicted RBP25.39■■□□□ 1.66
SNCA-203ENST00000394986 RARSP54136 660 aaKnown RBP25.39■■□□□ 1.66
SNCA-203ENST00000394986 ZNF622Q969S3 477 aaKnown RBP eCLIP25.39■■□□□ 1.66
SNCA-203ENST00000394986 FAM89AQ96GI7 184 aa25.39■■□□□ 1.66
SNCA-203ENST00000394986 SH3TC1Q8TE82 1336 aa25.39■■□□□ 1.66
SNCA-203ENST00000394986 NEXNQ0ZGT2 675 aa25.38■■□□□ 1.65
SNCA-203ENST00000394986 CCDC191Q8NCU4 936 aa25.38■■□□□ 1.65
SNCA-203ENST00000394986 JARID2Q92833 1246 aaPredicted RBP25.38■■□□□ 1.65
SNCA-203ENST00000394986 CWC25Q9NXE8 425 aaPredicted RBP25.38■■□□□ 1.65
SNCA-203ENST00000394986 RIC1Q4ADV7 1423 aa25.38■■□□□ 1.65
SNCA-203ENST00000394986 KLRG2A4D1S0 409 aaPredicted RBP25.37■■□□□ 1.65
SNCA-203ENST00000394986 SRGNP10124 158 aa25.37■■□□□ 1.65
SNCA-203ENST00000394986 RNF123Q5XPI4 1314 aa25.37■■□□□ 1.65
SNCA-203ENST00000394986 CACNA1FO60840 1977 aa25.36■■□□□ 1.65
SNCA-203ENST00000394986 BRCA1P38398 1863 aaKnown RBP25.36■■□□□ 1.65
SNCA-203ENST00000394986 NEURL1BA8MQ27 555 aa25.36■■□□□ 1.65
SNCA-203ENST00000394986 DALRD3Q5D0E6 543 aaKnown RBP25.36■■□□□ 1.65
SNCA-203ENST00000394986 DLEC1Q9Y238 1755 aa25.35■■□□□ 1.65
SNCA-203ENST00000394986 UTRNP46939 3433 aa25.35■■□□□ 1.65
SNCA-203ENST00000394986 SLC10A5Q5PT55 438 aa25.35■■□□□ 1.65
SNCA-203ENST00000394986 SLC4A10Q6U841 1118 aa25.35■■□□□ 1.65
SNCA-203ENST00000394986 MASTLQ96GX5 879 aa25.35■■□□□ 1.65
SNCA-203ENST00000394986 PDZRN3Q9UPQ7 1066 aa25.35■■□□□ 1.65
SNCA-203ENST00000394986 CRY2Q49AN0 593 aa25.34■■□□□ 1.65
SNCA-203ENST00000394986 TTLL6Q8N841 843 aa25.34■■□□□ 1.65
SNCA-203ENST00000394986 ZBTB38Q8NAP3 1195 aaPredicted RBP25.34■■□□□ 1.65
SNCA-203ENST00000394986 NPR1P16066 1061 aa25.33■■□□□ 1.65
SNCA-203ENST00000394986 BEND3Q5T5X7 828 aa25.33■■□□□ 1.65
SNCA-203ENST00000394986 STYK1Q6J9G0 422 aa25.33■■□□□ 1.65
SNCA-203ENST00000394986 LINS1Q8NG48 757 aa25.33■■□□□ 1.65
SNCA-203ENST00000394986 NOB1Q9ULX3 412 aaKnown RBP25.33■■□□□ 1.65
SNCA-203ENST00000394986 PTPRCP08575 1304 aa25.33■■□□□ 1.65
SNCA-203ENST00000394986 IRS4O14654 1257 aaPredicted RBP25.32■■□□□ 1.64
SNCA-203ENST00000394986 BCAR3O75815 825 aa25.32■■□□□ 1.64
SNCA-203ENST00000394986 PCCAP05165 728 aaPredicted RBP25.32■■□□□ 1.64
SNCA-203ENST00000394986 NLRP3Q96P20 1036 aa25.32■■□□□ 1.64
SNCA-203ENST00000394986 ZNF219Q9P2Y4 722 aaPredicted RBP25.32■■□□□ 1.64
SNCA-203ENST00000394986 GCKRQ14397 625 aa25.31■■□□□ 1.64
SNCA-203ENST00000394986 GRIN3BO60391 1043 aa25.3■■□□□ 1.64
SNCA-203ENST00000394986 RPGRQ92834 1020 aaKnown RBP25.3■■□□□ 1.64
SNCA-203ENST00000394986 DDX60Q8IY21 1712 aaKnown RBP25.3■■□□□ 1.64
SNCA-203ENST00000394986 PRPF40BQ6NWY9 871 aaKnown RBP25.29■■□□□ 1.64
SNCA-203ENST00000394986 CNKSR1Q969H4 720 aa25.29■■□□□ 1.64
SNCA-203ENST00000394986 BRPF1P55201 1214 aaPredicted RBP25.29■■□□□ 1.64
SNCA-203ENST00000394986 UBE3BQ7Z3V4 1068 aa25.28■■□□□ 1.64
SNCA-203ENST00000394986 SRCIN1Q9C0H9 1055 aa25.28■■□□□ 1.64
SNCA-203ENST00000394986 KIF16BQ96L93 1317 aa25.26■■□□□ 1.63
SNCA-203ENST00000394986 H7C1W4 665 aa25.26■■□□□ 1.63
SNCA-203ENST00000394986 C21orf2O43822 256 aa25.26■■□□□ 1.63
SNCA-203ENST00000394986 HOXA10P31260 410 aaPredicted RBP25.26■■□□□ 1.63
SNCA-203ENST00000394986 SLC51AQ86UW1 340 aa25.26■■□□□ 1.63
SNCA-203ENST00000394986 RBM17Q96I25 401 aaKnown RBP25.26■■□□□ 1.63
SNCA-203ENST00000394986 LAMB2P55268 1798 aa25.26■■□□□ 1.63
SNCA-203ENST00000394986 CDHR2Q9BYE9 1310 aa25.25■■□□□ 1.63
SNCA-203ENST00000394986 CASP7P55210 303 aa25.25■■□□□ 1.63
SNCA-203ENST00000394986 OLFM4Q6UX06 510 aa25.25■■□□□ 1.63
SNCA-203ENST00000394986 ARHGAP27Q6ZUM4 889 aa25.25■■□□□ 1.63
SNCA-203ENST00000394986 FRAT1Q92837 279 aaPredicted RBP25.25■■□□□ 1.63
SNCA-203ENST00000394986 ABCC4O15439 1325 aa25.24■■□□□ 1.63
SNCA-203ENST00000394986 SLX4Q8IY92 1834 aa25.24■■□□□ 1.63
SNCA-203ENST00000394986 TNNQ9UQP3 1299 aa25.24■■□□□ 1.63
SNCA-203ENST00000394986 ARFGEF1Q9Y6D6 1849 aa25.23■■□□□ 1.63
SNCA-203ENST00000394986 ALDH1L1O75891 902 aa25.23■■□□□ 1.63
SNCA-203ENST00000394986 ALDH1B1P30837 517 aa25.23■■□□□ 1.63
SNCA-203ENST00000394986 SF3B3Q15393 1217 aaKnown RBP25.23■■□□□ 1.63
SNCA-203ENST00000394986 CCDC85AQ96PX6 553 aaPredicted RBP25.23■■□□□ 1.63
SNCA-203ENST00000394986 CACNA1SQ13698 1873 aa25.23■■□□□ 1.63
SNCA-203ENST00000394986 PDE8AO60658 829 aa25.22■■□□□ 1.63
SNCA-203ENST00000394986 CRAMP1Q96RY5 1269 aa25.22■■□□□ 1.63
SNCA-203ENST00000394986 API5Q9BZZ5 524 aaKnown RBP25.22■■□□□ 1.63
SNCA-203ENST00000394986 C7orf43Q8WVR3 580 aa25.21■■□□□ 1.63
SNCA-203ENST00000394986 GRM8O00222 908 aa25.2■■□□□ 1.63
SNCA-203ENST00000394986 DDX46Q7L014 1031 aaKnown RBP25.2■■□□□ 1.63
SNCA-203ENST00000394986 COL4A1P02462 1669 aa25.2■■□□□ 1.62
SNCA-203ENST00000394986 HSP90B1P14625 803 aaKnown RBP25.2■■□□□ 1.62
SNCA-203ENST00000394986 CTSWP56202 376 aa25.2■■□□□ 1.62
SNCA-203ENST00000394986 RASSF7Q02833 373 aa25.2■■□□□ 1.62
SNCA-203ENST00000394986 ARHGAP45Q92619 1136 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms