RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GBP7Q8N8V2 638 aaPredicted RBP16.84■□□□□ 0.29
CCDC50-201ENST00000392455 IL1RAPL2Q9NP60 686 aa16.84■□□□□ 0.29
CCDC50-201ENST00000392455 RMND1Q9NWS8 449 aa16.84■□□□□ 0.29
CCDC50-201ENST00000392455 SETDB1Q15047 1291 aa16.84■□□□□ 0.29
CCDC50-201ENST00000392455 RNF168Q8IYW5 571 aaPredicted RBP16.84■□□□□ 0.29
CCDC50-201ENST00000392455 ABCF2Q9UG63 623 aa16.84■□□□□ 0.29
CCDC50-201ENST00000392455 TRIM7Q9C029 511 aa16.83■□□□□ 0.29
CCDC50-201ENST00000392455 PRC1O43663 620 aa16.83■□□□□ 0.29
CCDC50-201ENST00000392455 LACTBP83111 547 aaPredicted RBP16.83■□□□□ 0.29
CCDC50-201ENST00000392455 STMN2Q93045 179 aa16.83■□□□□ 0.29
CCDC50-201ENST00000392455 RNF41Q9H4P4 317 aaPredicted RBP16.83■□□□□ 0.29
CCDC50-201ENST00000392455 TRPC3Q13507 836 aa16.83■□□□□ 0.28
CCDC50-201ENST00000392455 BCAP29Q9UHQ4 241 aa16.83■□□□□ 0.28
CCDC50-201ENST00000392455 CIB2O75838 187 aa16.83■□□□□ 0.28
CCDC50-201ENST00000392455 TDRD12Q587J7 1177 aaKnown RBP16.83■□□□□ 0.28
CCDC50-201ENST00000392455 CCDC121Q6ZUS5 278 aa16.83■□□□□ 0.28
CCDC50-201ENST00000392455 RABGAP1Q9Y3P9 1069 aa16.83■□□□□ 0.28
CCDC50-201ENST00000392455 URI1O94763 535 aaPredicted RBP16.83■□□□□ 0.28
CCDC50-201ENST00000392455 ARL1P40616 181 aaPredicted RBP16.83■□□□□ 0.28
CCDC50-201ENST00000392455 NUF2Q9BZD4 464 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 TCP11L1Q9NUJ3 509 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 ZNF652Q9Y2D9 606 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 PRG4Q92954 1404 aaPredicted RBP16.82■□□□□ 0.28
CCDC50-201ENST00000392455 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 SH3BP5O60239 455 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 METTL24Q5JXM2 366 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 CCDC94Q9BW85 323 aaPredicted RBP16.82■□□□□ 0.28
CCDC50-201ENST00000392455 NOC2LQ9Y3T9 749 aaKnown RBP16.82■□□□□ 0.28
CCDC50-201ENST00000392455 STARD3NLO95772 234 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 RBM28Q9NW13 759 aaKnown RBP16.82■□□□□ 0.28
CCDC50-201ENST00000392455 ATP11AP98196 1134 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 STX6O43752 255 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 CHMP4BP1P59074 171 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 SYNCQ9H7C4 482 aa16.82■□□□□ 0.28
CCDC50-201ENST00000392455 STX1AQ16623 288 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 NUTM1Q86Y26 1132 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 BRPF3Q9ULD4 1205 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 BMP15O95972 392 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 ZNF853P0CG23 659 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 IRX4P78413 519 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 PHLDB2Q86SQ0 1253 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 KRT222Q8N1A0 295 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 RPGRIP1LQ68CZ1 1315 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 HFM1A2PYH4 1435 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 CFAP157Q5JU67 520 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 HDAC9Q9UKV0 1011 aa16.81■□□□□ 0.28
CCDC50-201ENST00000392455 APBB1IPQ7Z5R6 666 aaPredicted RBP16.81■□□□□ 0.28
CCDC50-201ENST00000392455 CTCFLQ8NI51 663 aaPredicted RBP16.81■□□□□ 0.28
CCDC50-201ENST00000392455 ANKLE2Q86XL3 938 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 B4GALNT4Q76KP1 1039 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 IQCA1Q86XH1 822 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 ARHGAP24Q8N264 748 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 VCX3AQ9NNX9 186 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 KIAA1107Q9UPP5 1409 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 CCDC129Q6ZRS4 1044 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 PLEKHH2Q8IVE3 1493 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 HVCN1Q96D96 273 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 POLR3DP05423 398 aaPredicted RBP16.8■□□□□ 0.28
CCDC50-201ENST00000392455 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCDC50-201ENST00000392455 CAMK4Q16566 473 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 EBAG9O00559 213 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 NOP2P46087 812 aaKnown RBP16.8■□□□□ 0.28
CCDC50-201ENST00000392455 ANKIB1Q9P2G1 1089 aa16.8■□□□□ 0.28
CCDC50-201ENST00000392455 IRX3P78415 501 aaPredicted RBP16.79■□□□□ 0.28
CCDC50-201ENST00000392455 LMNTD2Q8IXW0 634 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 JADE2Q9NQC1 790 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 MINDY4BA8MYZ0 360 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 DDX19AQ9NUU7 478 aaKnown RBP16.79■□□□□ 0.28
CCDC50-201ENST00000392455 ZPR1O75312 459 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 EPSTI1Q96J88 318 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 RAB11FIP3O75154 756 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 GBP1P32455 592 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 TAOK1Q7L7X3 1001 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 CROCCP2Q86T23 111 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 HAUS8Q9BT25 410 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 TTC36A6NLP5 189 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 SPAG5Q96R06 1193 aa16.79■□□□□ 0.28
CCDC50-201ENST00000392455 CYLC1P35663 651 aaPredicted RBP16.78■□□□□ 0.28
CCDC50-201ENST00000392455 ERMNQ8TAM6 284 aa16.78■□□□□ 0.28
CCDC50-201ENST00000392455 CRACR2BQ8N4Y2 399 aaPredicted RBP16.78■□□□□ 0.28
CCDC50-201ENST00000392455 B4DLN1 442 aa16.78■□□□□ 0.28
CCDC50-201ENST00000392455 MRPL12P52815 198 aaKnown RBP16.78■□□□□ 0.28
CCDC50-201ENST00000392455 ZC3H6P61129 1189 aaKnown RBP16.78■□□□□ 0.28
CCDC50-201ENST00000392455 CCDC144CPQ8IYA2 1237 aa16.78■□□□□ 0.28
CCDC50-201ENST00000392455 SUDS3Q9H7L9 328 aaPredicted RBP16.78■□□□□ 0.28
CCDC50-201ENST00000392455 CAVIN4Q5BKX8 364 aa16.78■□□□□ 0.28
CCDC50-201ENST00000392455 CCDC117Q8IWD4 279 aaPredicted RBP16.78■□□□□ 0.28
CCDC50-201ENST00000392455 CCT6BQ92526 530 aa16.78■□□□□ 0.28
CCDC50-201ENST00000392455 CSRNP2Q9H175 543 aa16.78■□□□□ 0.28
CCDC50-201ENST00000392455 DNAJC8O75937 253 aaPredicted RBP16.78■□□□□ 0.28
CCDC50-201ENST00000392455 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
CCDC50-201ENST00000392455 NCBP1Q09161 790 aaKnown RBP16.78■□□□□ 0.28
CCDC50-201ENST00000392455 SAMD15Q9P1V8 674 aa16.78■□□□□ 0.28
CCDC50-201ENST00000392455 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.28
CCDC50-201ENST00000392455 RSPH3Q86UC2 560 aa16.77■□□□□ 0.28
CCDC50-201ENST00000392455 EIF3DO15371 548 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCDC50-201ENST00000392455 TBC1D31Q96DN5 1066 aa16.77■□□□□ 0.28
CCDC50-201ENST00000392455 HYPKQ9NX55 129 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms