RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 TMOD3Q9NYL9 352 aa14.56□□□□□ -0.08
CAPRIN1-202ENST00000389645 PDIA4P13667 645 aaKnown RBP14.56□□□□□ -0.08
CAPRIN1-202ENST00000389645 ZSCAN23Q3MJ62 389 aa14.56□□□□□ -0.08
CAPRIN1-202ENST00000389645 ANKRD13DQ6ZTN6 518 aa14.56□□□□□ -0.08
CAPRIN1-202ENST00000389645 PIGBQ92521 554 aa14.56□□□□□ -0.08
CAPRIN1-202ENST00000389645 C5P01031 1676 aa14.55□□□□□ -0.08
CAPRIN1-202ENST00000389645 G3BP1Q13283 466 aaKnown RBP eCLIP14.55□□□□□ -0.087e-7■■□□□ 12.3
CAPRIN1-202ENST00000389645 LRP10Q7Z4F1 713 aa14.55□□□□□ -0.08
CAPRIN1-202ENST00000389645 IL25Q9H293 177 aa14.55□□□□□ -0.08
CAPRIN1-202ENST00000389645 TAOK2Q9UL54 1235 aa14.55□□□□□ -0.08
CAPRIN1-202ENST00000389645 EXOC5O00471 708 aa14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 PRIM1P49642 420 aaKnown RBP14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 KLHDC4Q8TBB5 520 aa14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 LMBRD1Q9NUN5 540 aa14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 TTLL7Q6ZT98 887 aa14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 LINS1Q8NG48 757 aa14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 GPATCH3Q96I76 525 aa14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 IBTKQ9P2D0 1353 aaPredicted RBP14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 CASTP20810 708 aaKnown RBP14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 PRPF40BQ6NWY9 871 aaKnown RBP14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 SSH3Q8TE77 659 aa14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 BBXQ8WY36 941 aaPredicted RBP14.54□□□□□ -0.08
CAPRIN1-202ENST00000389645 VPS37CA5D8V6 355 aaPredicted RBP14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 FIBPO43427 364 aa14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 SUCLG2Q96I99 432 aa14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 BOLA2Q9H3K6 86 aa14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 OSBPL3Q9H4L5 887 aa14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 GRM8O00222 908 aa14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 TCEANC2Q96MN5 208 aa14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 MCM2P49736 904 aa14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 HSP90AB4PQ58FF6 505 aa14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 KAZALD1Q96I82 304 aa14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 PXDNLA1KZ92 1463 aa14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 PARP4Q9UKK3 1724 aaKnown RBP14.53□□□□□ -0.08
CAPRIN1-202ENST00000389645 MRC1P22897 1456 aa14.52□□□□□ -0.08
CAPRIN1-202ENST00000389645 RAB11FIP3O75154 756 aa14.52□□□□□ -0.08
CAPRIN1-202ENST00000389645 ALDH1L1O75891 902 aa14.52□□□□□ -0.08
CAPRIN1-202ENST00000389645 JAKMIP1Q96N16 626 aaKnown RBP14.52□□□□□ -0.08
CAPRIN1-202ENST00000389645 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.08
CAPRIN1-202ENST00000389645 NSFL1CQ9UNZ2 370 aaKnown RBP14.52□□□□□ -0.08
CAPRIN1-202ENST00000389645 SMC3Q9UQE7 1217 aa14.52□□□□□ -0.08
CAPRIN1-202ENST00000389645 NEXNQ0ZGT2 675 aa14.52□□□□□ -0.09
CAPRIN1-202ENST00000389645 ZBTB3Q9H5J0 574 aa14.52□□□□□ -0.09
CAPRIN1-202ENST00000389645 NEURL1BA8MQ27 555 aa14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 ACSBG1Q96GR2 724 aa14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 METTL22Q9BUU2 404 aaPredicted RBP14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 BICC1Q9H694 974 aaKnown RBP14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 PRDM4Q9UKN5 801 aa14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 ISY1Q9ULR0 285 aaKnown RBP14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 ZDHHC9Q9Y397 364 aa14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 AHDC1Q5TGY3 1603 aaPredicted RBP14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 CCDC83Q8IWF9 413 aa14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 DNAJC10Q8IXB1 793 aa14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 FSD1Q9BTV5 496 aa14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 ATG3Q9NT62 314 aa14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 GPT2Q8TD30 523 aa14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 FAM13BQ9NYF5 915 aa14.51□□□□□ -0.09
CAPRIN1-202ENST00000389645 MAPK8IP2Q13387 824 aaPredicted RBP14.5□□□□□ -0.09
CAPRIN1-202ENST00000389645 POLA2Q14181 598 aa14.5□□□□□ -0.09
CAPRIN1-202ENST00000389645 GCKRQ14397 625 aa14.5□□□□□ -0.09
CAPRIN1-202ENST00000389645 EPHA10Q5JZY3 1008 aa14.5□□□□□ -0.09
CAPRIN1-202ENST00000389645 RBSNQ9H1K0 784 aa14.5□□□□□ -0.09
CAPRIN1-202ENST00000389645 GLRX3O76003 335 aaKnown RBP14.5□□□□□ -0.09
CAPRIN1-202ENST00000389645 RUFY2Q8WXA3 655 aa14.5□□□□□ -0.09
CAPRIN1-202ENST00000389645 C8orf37Q96NL8 207 aa14.5□□□□□ -0.09
CAPRIN1-202ENST00000389645 PHLPP1O60346 1717 aa14.5□□□□□ -0.09
CAPRIN1-202ENST00000389645 COL16A1Q07092 1604 aaPredicted RBP14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 CCDC173Q0VFZ6 552 aa14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 UBE3BQ7Z3V4 1068 aa14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 TMEM63CQ9P1W3 806 aa14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 SHANK3Q9BYB0 1731 aa14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 ERBB4Q15303 1308 aa14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 ZKSCAN1P17029 563 aaPredicted RBP14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 STK3Q13188 491 aa14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 FERMT3Q86UX7 667 aa14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 ECHDC1Q9NTX5 307 aa14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 NDUFB9Q9Y6M9 179 aa14.49□□□□□ -0.09
CAPRIN1-202ENST00000389645 SPATA31A1Q5TZJ5 1347 aa14.48□□□□□ -0.09
CAPRIN1-202ENST00000389645 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.48□□□□□ -0.09
CAPRIN1-202ENST00000389645 AK2P54819 239 aa14.48□□□□□ -0.09
CAPRIN1-202ENST00000389645 DDB1Q16531 1140 aa14.48□□□□□ -0.09
CAPRIN1-202ENST00000389645 NECAB1Q8N987 351 aa14.48□□□□□ -0.09
CAPRIN1-202ENST00000389645 PLEKHG2Q9H7P9 1386 aa14.48□□□□□ -0.09
CAPRIN1-202ENST00000389645 NGLY1Q96IV0 654 aa14.48□□□□□ -0.09
CAPRIN1-202ENST00000389645 SLC4A9Q96Q91 983 aa14.48□□□□□ -0.09
CAPRIN1-202ENST00000389645 DNAJC2Q99543 621 aaKnown RBP14.48□□□□□ -0.09
CAPRIN1-202ENST00000389645 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.48□□□□□ -0.09
CAPRIN1-202ENST00000389645 A0A087WZG4 1122 aa14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 COL14A1Q05707 1796 aaKnown RBP14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 SGSM2O43147 1006 aa14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 GADD45BO75293 160 aaPredicted RBP14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 CLCN1P35523 988 aa14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 PLBD2Q8NHP8 589 aa14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 SYAP1Q96A49 352 aaPredicted RBP14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 SNX14Q9Y5W7 946 aa14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 FOSBP53539 338 aa14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 DNTTIP2Q5QJE6 756 aaKnown RBP14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
CAPRIN1-202ENST00000389645 STAP2Q9UGK3 403 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms