RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 TWISTNBQ3B726 338 aaPredicted RBP10.94□□□□□ -0.66
MT-TS1-201ENST00000387416 ERFEQ4G0M1 354 aa10.94□□□□□ -0.66
MT-TS1-201ENST00000387416 PRPF40BQ6NWY9 871 aaKnown RBP10.94□□□□□ -0.66
MT-TS1-201ENST00000387416 NLRP10Q86W26 655 aa10.94□□□□□ -0.66
MT-TS1-201ENST00000387416 RPGRQ92834 1020 aaKnown RBP10.94□□□□□ -0.66
MT-TS1-201ENST00000387416 RBM17Q96I25 401 aaKnown RBP10.94□□□□□ -0.66
MT-TS1-201ENST00000387416 CRAMP1Q96RY5 1269 aa10.94□□□□□ -0.66
MT-TS1-201ENST00000387416 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
MT-TS1-201ENST00000387416 C21orf2O43822 256 aa10.93□□□□□ -0.66
MT-TS1-201ENST00000387416 RIC3Q7Z5B4 369 aa10.93□□□□□ -0.66
MT-TS1-201ENST00000387416 NUTM1Q86Y26 1132 aa10.93□□□□□ -0.66
MT-TS1-201ENST00000387416 RTKN2Q8IZC4 609 aa10.93□□□□□ -0.66
MT-TS1-201ENST00000387416 ISCA1Q9BUE6 129 aa10.93□□□□□ -0.66
MT-TS1-201ENST00000387416 TMX4Q9H1E5 349 aaPredicted RBP10.93□□□□□ -0.66
MT-TS1-201ENST00000387416 RNF181Q9P0P0 153 aa10.93□□□□□ -0.66
MT-TS1-201ENST00000387416 TRMT112Q9UI30 125 aaKnown RBP10.93□□□□□ -0.66
MT-TS1-201ENST00000387416 KDM2BQ8NHM5 1336 aa10.92□□□□□ -0.66
MT-TS1-201ENST00000387416 SH3TC1Q8TE82 1336 aa10.92□□□□□ -0.66
MT-TS1-201ENST00000387416 CCDC93Q567U6 631 aa10.92□□□□□ -0.66
MT-TS1-201ENST00000387416 C7orf43Q8WVR3 580 aa10.92□□□□□ -0.66
MT-TS1-201ENST00000387416 TSR2Q969E8 191 aaKnown RBP10.92□□□□□ -0.66
MT-TS1-201ENST00000387416 TAOK3Q9H2K8 898 aa10.92□□□□□ -0.66
MT-TS1-201ENST00000387416 SBF1O95248 1867 aa10.91□□□□□ -0.66
MT-TS1-201ENST00000387416 FANCIQ9NVI1 1328 aa10.91□□□□□ -0.66
MT-TS1-201ENST00000387416 ANKRD36CQ5JPF3 1778 aa10.91□□□□□ -0.66
MT-TS1-201ENST00000387416 BBOX1O75936 387 aa10.91□□□□□ -0.66
MT-TS1-201ENST00000387416 KSR2Q6VAB6 950 aa10.91□□□□□ -0.66
MT-TS1-201ENST00000387416 TSPYL6Q8N831 410 aa10.91□□□□□ -0.66
MT-TS1-201ENST00000387416 CCDC191Q8NCU4 936 aa10.91□□□□□ -0.66
MT-TS1-201ENST00000387416 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
MT-TS1-201ENST00000387416 SLX4Q8IY92 1834 aa10.91□□□□□ -0.66
MT-TS1-201ENST00000387416 ARFGEF2Q9Y6D5 1785 aa10.9□□□□□ -0.66
MT-TS1-201ENST00000387416 COL11A2P13942 1736 aaPredicted RBP10.9□□□□□ -0.66
MT-TS1-201ENST00000387416 NFKBIEO00221 500 aa10.9□□□□□ -0.66
MT-TS1-201ENST00000387416 SLC4A2P04920 1241 aa10.9□□□□□ -0.66
MT-TS1-201ENST00000387416 NEXNQ0ZGT2 675 aa10.9□□□□□ -0.66
MT-TS1-201ENST00000387416 DPY19L2Q6NUT2 758 aa10.9□□□□□ -0.66
MT-TS1-201ENST00000387416 TMC4Q7Z404 712 aa10.9□□□□□ -0.66
MT-TS1-201ENST00000387416 METTL22Q9BUU2 404 aaPredicted RBP10.9□□□□□ -0.66
MT-TS1-201ENST00000387416 PHAXQ9H814 394 aaKnown RBP10.9□□□□□ -0.66
MT-TS1-201ENST00000387416 ABCC12Q96J65 1359 aa10.9□□□□□ -0.67
MT-TS1-201ENST00000387416 FER1L6Q2WGJ9 1857 aa10.89□□□□□ -0.67
MT-TS1-201ENST00000387416 VAMP4O75379 141 aa10.89□□□□□ -0.67
MT-TS1-201ENST00000387416 FKBP4Q02790 459 aaKnown RBP eCLIP10.89□□□□□ -0.67
MT-TS1-201ENST00000387416 EXOSC9Q06265 439 aaKnown RBP10.89□□□□□ -0.67
MT-TS1-201ENST00000387416 DDX46Q7L014 1031 aaKnown RBP10.89□□□□□ -0.67
MT-TS1-201ENST00000387416 PSMD1Q99460 953 aa10.89□□□□□ -0.67
MT-TS1-201ENST00000387416 ZNF219Q9P2Y4 722 aaPredicted RBP10.89□□□□□ -0.67
MT-TS1-201ENST00000387416 ZNF521Q96K83 1311 aa10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 GLTPD2A6NH11 291 aa10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 E9PSI1 815 aa10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 ATP5J2-PTCD1G3V325 749 aa10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 PCCAP05165 728 aaPredicted RBP10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 C1QTNF8P60827 252 aa10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 RASSF7Q02833 373 aa10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 SF3B3Q15393 1217 aaKnown RBP10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 ZBTB38Q8NAP3 1195 aaPredicted RBP10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 VPS33BQ9H267 617 aa10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 CWC25Q9NXE8 425 aaPredicted RBP10.88□□□□□ -0.67
MT-TS1-201ENST00000387416 CCDC88AQ3V6T2 1871 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 SENP3-EIF4A1A0A087X0R7 540 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 PI4KAP2A4QPH2 592 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 IRS4O14654 1257 aaPredicted RBP10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 HCLS1P14317 486 aaPredicted RBP10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 FLIIQ13045 1269 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 SP8Q8IXZ3 490 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 PI4KAP1Q8N8J0 262 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 ZNF526Q8TF50 670 aaPredicted RBP10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 ZNF428Q96B54 188 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 FAM89AQ96GI7 184 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 MYD88Q99836 296 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 MAP3K2Q9Y2U5 619 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 ATP6V0A2Q9Y487 856 aa10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 DICER1Q9UPY3 1922 aaKnown RBP10.87□□□□□ -0.67
MT-TS1-201ENST00000387416 PPEF1O14829 653 aaPredicted RBP10.86□□□□□ -0.67
MT-TS1-201ENST00000387416 GRAPQ13588 217 aa10.86□□□□□ -0.67
MT-TS1-201ENST00000387416 C16orf71Q8IYS4 520 aaPredicted RBP10.86□□□□□ -0.67
MT-TS1-201ENST00000387416 SYNE4Q8N205 404 aa10.86□□□□□ -0.67
MT-TS1-201ENST00000387416 SUPT20HQ8NEM7 779 aa10.86□□□□□ -0.67
MT-TS1-201ENST00000387416 GRAPLQ8TC17 118 aaPredicted RBP10.86□□□□□ -0.67
MT-TS1-201ENST00000387416 JDP2Q8WYK2 163 aa10.86□□□□□ -0.67
MT-TS1-201ENST00000387416 CACNA1SQ13698 1873 aa10.85□□□□□ -0.67
MT-TS1-201ENST00000387416 KIF3CO14782 793 aa10.85□□□□□ -0.67
MT-TS1-201ENST00000387416 TOMM70O94826 608 aa10.85□□□□□ -0.67
MT-TS1-201ENST00000387416 VEGFAP15692 232 aaPredicted RBP10.85□□□□□ -0.67
MT-TS1-201ENST00000387416 FKBP5Q13451 457 aaPredicted RBP10.85□□□□□ -0.67
MT-TS1-201ENST00000387416 C3orf67Q6ZVT6 689 aa10.85□□□□□ -0.67
MT-TS1-201ENST00000387416 SPINK5Q9NQ38 1064 aaPredicted RBP10.85□□□□□ -0.67
MT-TS1-201ENST00000387416 TNRC6CQ9HCJ0 1690 aaKnown RBP10.85□□□□□ -0.67
MT-TS1-201ENST00000387416 ABCC4O15439 1325 aa10.84□□□□□ -0.67
MT-TS1-201ENST00000387416 CDHR2Q9BYE9 1310 aa10.84□□□□□ -0.67
MT-TS1-201ENST00000387416 PDE8AO60658 829 aa10.84□□□□□ -0.67
MT-TS1-201ENST00000387416 CT47B1P0C2W7 299 aaPredicted RBP10.84□□□□□ -0.67
MT-TS1-201ENST00000387416 IARSP41252 1262 aaKnown RBP10.84□□□□□ -0.67
MT-TS1-201ENST00000387416 PRELPP51888 382 aa10.84□□□□□ -0.67
MT-TS1-201ENST00000387416 CCDC152Q4G0S7 254 aa10.84□□□□□ -0.67
MT-TS1-201ENST00000387416 LINS1Q8NG48 757 aa10.84□□□□□ -0.67
MT-TS1-201ENST00000387416 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
MT-TS1-201ENST00000387416 DNAAF4Q8WXU2 420 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms