RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 CNKSR1Q969H4 720 aa1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 MFSD14AQ96MC6 490 aa1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 FAM83CQ9BQN1 747 aa1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 ESYT1Q9BSJ8 1104 aa1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 GJA3Q9Y6H8 435 aa1.93□□□□□ -2.1
RNU6-540P-201ENST00000384622 MOXD2PA6NHM9 499 aa1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 RGS9O75916 674 aaPredicted RBP1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 TBC1D8BQ0IIM8 1120 aa1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 BHLHA9Q7RTU4 235 aa1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 C1orf216Q8TAB5 229 aa1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 NTN5Q8WTR8 489 aaPredicted RBP1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 TSC1Q92574 1164 aa1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 OSBPL1AQ9BXW6 950 aa1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 KCNF1Q9H3M0 494 aa1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 RC3H2Q9HBD1 1191 aaKnown RBP1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 RAB6BQ9NRW1 208 aa1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 ATP1B4Q9UN42 357 aaPredicted RBP1.92□□□□□ -2.1
RNU6-540P-201ENST00000384622 KRTAP29-1A8MX34 341 aaPredicted RBP1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 SOCS7O14512 581 aa1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 DEAF1O75398 565 aaPredicted RBP1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 TMEM253P0C7T8 217 aa1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 MDM2Q00987 491 aaPredicted RBP1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 UVSSAQ2YD98 709 aa1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 CC2D2BQ6DHV5 1058 aa1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 PSAPL1Q6NUJ1 521 aa1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 AIDAQ96BJ3 306 aa1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 SLC30A3Q99726 388 aa1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 CEP41Q9BYV8 373 aa1.91□□□□□ -2.1
RNU6-540P-201ENST00000384622 ZNF503-AS2A6NEH8 195 aa1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 ESPNB1AK53 854 aa1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 CYP26A1O43174 497 aa1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 EFSO43281 561 aa1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 ATP4AP20648 1035 aa1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 CPSF6Q16630 551 aaKnown RBP eCLIP1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 BEND4Q6ZU67 534 aa1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 RAB44Q7Z6P3 723 aaPredicted RBP1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 DZIP3Q86Y13 1208 aaKnown RBP1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 WFDC8Q8IUA0 241 aa1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 SEPT12Q8IYM1 358 aa1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 RHBDD1Q8TEB9 315 aa1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 UBE2OQ9C0C9 1292 aaKnown RBP1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 IGFLR1Q9H665 355 aa1.9□□□□□ -2.11
RNU6-540P-201ENST00000384622 GPR37O15354 613 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 TNFRSF1AP19438 455 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 PLA2G4AP47712 749 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 ERVK-9P63128 1117 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 PTK2Q05397 1052 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 KCNMB1Q16558 191 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 ZSWIM9Q86XI8 627 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 FBXL6Q8N531 539 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 ADAM32Q8TC27 787 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 SPIRE2Q8WWL2 714 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 KCNC2Q96PR1 638 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 IRF2BPLQ9H1B7 796 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 ESF1Q9H501 851 aaKnown RBP1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 CD320Q9NPF0 282 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 SLC6A14Q9UN76 642 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 SLC5A6Q9Y289 635 aa1.89□□□□□ -2.11
RNU6-540P-201ENST00000384622 TCAF2A6NFQ2 919 aa1.88□□□□□ -2.11
RNU6-540P-201ENST00000384622 IL2RAP01589 272 aa1.88□□□□□ -2.11
RNU6-540P-201ENST00000384622 LMO1P25800 156 aa1.88□□□□□ -2.11
RNU6-540P-201ENST00000384622 EFEMP1Q12805 493 aa1.88□□□□□ -2.11
RNU6-540P-201ENST00000384622 SAMD5Q5TGI4 173 aa1.88□□□□□ -2.11
RNU6-540P-201ENST00000384622 PPP2R2DQ66LE6 453 aa1.88□□□□□ -2.11
RNU6-540P-201ENST00000384622 ATG14Q6ZNE5 492 aa1.88□□□□□ -2.11
RNU6-540P-201ENST00000384622 FAM20CQ8IXL6 584 aa1.88□□□□□ -2.11
RNU6-540P-201ENST00000384622 LIN37Q96GY3 246 aaPredicted RBP1.88□□□□□ -2.11
RNU6-540P-201ENST00000384622 SEMA6CQ9H3T2 930 aa1.88□□□□□ -2.11
RNU6-540P-201ENST00000384622 ZBTB42B2RXF5 422 aa1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 GNRH1P01148 92 aa1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 F13BP05160 661 aa1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 RNASE1P07998 156 aaKnown RBP1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 BMP3P12645 472 aa1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 KRTAP10-6P60371 365 aaPredicted RBP1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 SPEM2Q0P670 501 aa1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 ZNF574Q6ZN55 896 aaPredicted RBP1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 PRR23BQ6ZRT6 265 aa1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 VWCEQ96DN2 955 aa1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 FAM46AQ96IP4 442 aaKnown RBP1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 FHDC1Q9C0D6 1143 aaPredicted RBP1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 SCAND2PQ9GZW5 306 aaPredicted RBP1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 ZBTB3Q9H5J0 574 aa1.87□□□□□ -2.11
RNU6-540P-201ENST00000384622 LILRB3O75022 631 aa1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 AMHP03971 560 aa1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 SLPIP03973 132 aa1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 GDF5P43026 501 aa1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 CSRP2Q16527 193 aa1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 GDF6Q6KF10 455 aaPredicted RBP1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 MPZL3Q6UWV2 235 aa1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 ZC3HAV1Q7Z2W4 902 aaKnown RBP1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 ZNF575Q86XF7 245 aa1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 PPARGC1BQ86YN6 1023 aaKnown RBP1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 MARCH10Q8NA82 808 aaPredicted RBP1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 FBXO15Q8NCQ5 510 aaPredicted RBP1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 LRRN4CLQ8ND94 238 aa1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 BCL7CQ8WUZ0 217 aaPredicted RBP1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 OCSTAMPQ9BR26 566 aa1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 METTL22Q9BUU2 404 aaPredicted RBP1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 FAM217BQ9NTX9 383 aaPredicted RBP1.86□□□□□ -2.11
RNU6-540P-201ENST00000384622 PALD1Q9ULE6 856 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms