RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 CDHR2Q9BYE9 1310 aa8.38□□□□□ -1.07
NFX1-202ENST00000379521 ATG9AQ7Z3C6 839 aa8.38□□□□□ -1.07
NFX1-202ENST00000379521 PLBD2Q8NHP8 589 aa8.38□□□□□ -1.07
NFX1-202ENST00000379521 MAP3K2Q9Y2U5 619 aa8.38□□□□□ -1.07
NFX1-202ENST00000379521 UBTFL1P0CB47 393 aaPredicted RBP8.38□□□□□ -1.07
NFX1-202ENST00000379521 KLHL40Q2TBA0 621 aa8.38□□□□□ -1.07
NFX1-202ENST00000379521 EPHA10Q5JZY3 1008 aa8.38□□□□□ -1.07
NFX1-202ENST00000379521 NUTM2GQ5VZR2 741 aa8.38□□□□□ -1.07
NFX1-202ENST00000379521 ERC1Q8IUD2 1116 aa8.38□□□□□ -1.07
NFX1-202ENST00000379521 SH3TC1Q8TE82 1336 aa8.38□□□□□ -1.07
NFX1-202ENST00000379521 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
NFX1-202ENST00000379521 FKBP5Q13451 457 aaPredicted RBP8.37□□□□□ -1.07
NFX1-202ENST00000379521 ZNF496Q96IT1 587 aaPredicted RBP8.37□□□□□ -1.07
NFX1-202ENST00000379521 PPP1R9BQ96SB3 815 aa8.37□□□□□ -1.07
NFX1-202ENST00000379521 SNRPA1P09661 255 aaKnown RBP8.37□□□□□ -1.07
NFX1-202ENST00000379521 DUOX1Q9NRD9 1551 aa8.37□□□□□ -1.07
NFX1-202ENST00000379521 ATP5JP18859 108 aa8.37□□□□□ -1.07
NFX1-202ENST00000379521 PDLIM2Q96JY6 352 aa8.37□□□□□ -1.07
NFX1-202ENST00000379521 CCDC171Q6TFL3 1326 aa8.37□□□□□ -1.07
NFX1-202ENST00000379521 HDAC5Q9UQL6 1122 aa8.36□□□□□ -1.07
NFX1-202ENST00000379521 EXOC6BQ9Y2D4 811 aa8.36□□□□□ -1.07
NFX1-202ENST00000379521 SNX14Q9Y5W7 946 aa8.36□□□□□ -1.07
NFX1-202ENST00000379521 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
NFX1-202ENST00000379521 FOXP2O15409 715 aa8.36□□□□□ -1.07
NFX1-202ENST00000379521 BAG4O95429 457 aaKnown RBP8.36□□□□□ -1.07
NFX1-202ENST00000379521 SKOR2Q2VWA4 1001 aaPredicted RBP8.36□□□□□ -1.07
NFX1-202ENST00000379521 VGLL2Q8N8G2 317 aa8.36□□□□□ -1.07
NFX1-202ENST00000379521 SLAIN2Q9P270 581 aa8.36□□□□□ -1.07
NFX1-202ENST00000379521 SALL1Q9NSC2 1324 aa8.36□□□□□ -1.07
NFX1-202ENST00000379521 GLRX3O76003 335 aaKnown RBP8.35□□□□□ -1.07
NFX1-202ENST00000379521 HSCBQ8IWL3 235 aa8.35□□□□□ -1.07
NFX1-202ENST00000379521 EAF2Q96CJ1 260 aaPredicted RBP8.35□□□□□ -1.07
NFX1-202ENST00000379521 BICC1Q9H694 974 aaKnown RBP8.35□□□□□ -1.07
NFX1-202ENST00000379521 CARMIL3Q8ND23 1372 aa8.35□□□□□ -1.07
NFX1-202ENST00000379521 EVI5LQ96CN4 794 aa8.35□□□□□ -1.07
NFX1-202ENST00000379521 GREB1LQ9C091 1923 aaPredicted RBP8.34□□□□□ -1.07
NFX1-202ENST00000379521 XRCC6P12956 609 aaKnown RBP eCLIP8.34□□□□□ -1.07
NFX1-202ENST00000379521 TATP17735 454 aaPredicted RBP8.34□□□□□ -1.07
NFX1-202ENST00000379521 C1orf141Q5JVX7 400 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 VPS53Q5VIR6 699 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 RBM33Q96EV2 1170 aaKnown RBP8.34□□□□□ -1.07
NFX1-202ENST00000379521 TMX3Q96JJ7 454 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 ECHDC1Q9NTX5 307 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 USP16Q9Y5T5 823 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 ZMYM6O95789 1325 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 NUCB2P80303 420 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 ERICH6Q7L0X2 663 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 NFATC2IPQ8NCF5 419 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 FMNL2Q96PY5 1086 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 HAUS7Q99871 368 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 FUCA2Q9BTY2 467 aa8.34□□□□□ -1.07
NFX1-202ENST00000379521 TRAK2O60296 914 aa8.34□□□□□ -1.08
NFX1-202ENST00000379521 PDIA4P13667 645 aaKnown RBP8.33□□□□□ -1.08
NFX1-202ENST00000379521 ATF3P18847 181 aa8.33□□□□□ -1.08
NFX1-202ENST00000379521 NBR1Q14596 966 aa8.33□□□□□ -1.08
NFX1-202ENST00000379521 RUFY3Q7L099 469 aa8.33□□□□□ -1.08
NFX1-202ENST00000379521 GAS2L3Q86XJ1 694 aa8.33□□□□□ -1.08
NFX1-202ENST00000379521 RASEFQ8IZ41 740 aa8.33□□□□□ -1.08
NFX1-202ENST00000379521 AK7Q96M32 723 aa8.33□□□□□ -1.08
NFX1-202ENST00000379521 SLC4A9Q96Q91 983 aa8.33□□□□□ -1.08
NFX1-202ENST00000379521 TRHP20396 242 aaPredicted RBP8.33□□□□□ -1.08
NFX1-202ENST00000379521 RBM43Q6ZSC3 357 aaKnown RBP8.33□□□□□ -1.08
NFX1-202ENST00000379521 GPT2Q8TD30 523 aa8.33□□□□□ -1.08
NFX1-202ENST00000379521 SRGAP3O43295 1099 aa8.33□□□□□ -1.08
NFX1-202ENST00000379521 PKP1Q13835 747 aa8.33□□□□□ -1.08
NFX1-202ENST00000379521 CCDC88AQ3V6T2 1871 aa8.32□□□□□ -1.08
NFX1-202ENST00000379521 WDR19Q8NEZ3 1342 aa8.32□□□□□ -1.08
NFX1-202ENST00000379521 TEFQ10587 303 aa8.32□□□□□ -1.08
NFX1-202ENST00000379521 CWF19L2Q2TBE0 894 aaKnown RBP8.32□□□□□ -1.08
NFX1-202ENST00000379521 CCDC191Q8NCU4 936 aa8.32□□□□□ -1.08
NFX1-202ENST00000379521 ZNF335Q9H4Z2 1342 aaPredicted RBP8.32□□□□□ -1.08
NFX1-202ENST00000379521 IRS2Q9Y4H2 1338 aa8.32□□□□□ -1.08
NFX1-202ENST00000379521 THRAP3Q9Y2W1 955 aaKnown RBP8.32□□□□□ -1.08
NFX1-202ENST00000379521 SSFA2P28290 1259 aa8.31□□□□□ -1.08
NFX1-202ENST00000379521 ANKRD13DQ6ZTN6 518 aa8.31□□□□□ -1.08
NFX1-202ENST00000379521 DDX17Q92841 729 aaKnown RBP8.31□□□□□ -1.08
NFX1-202ENST00000379521 BCL11AQ9H165 835 aa8.31□□□□□ -1.08
NFX1-202ENST00000379521 PSME4Q14997 1843 aa8.31□□□□□ -1.08
NFX1-202ENST00000379521 FAM43AQ8N2R8 423 aa8.31□□□□□ -1.08
NFX1-202ENST00000379521 DBNLQ9UJU6 430 aaKnown RBP8.31□□□□□ -1.08
NFX1-202ENST00000379521 HIP1O00291 1037 aa8.31□□□□□ -1.08
NFX1-202ENST00000379521 TAF5LO75529 589 aa8.31□□□□□ -1.08
NFX1-202ENST00000379521 DDX58O95786 925 aaKnown RBP8.31□□□□□ -1.08
NFX1-202ENST00000379521 EXOSC10Q01780 885 aaKnown RBP8.31□□□□□ -1.08
NFX1-202ENST00000379521 PTH1RQ03431 593 aa8.31□□□□□ -1.08
NFX1-202ENST00000379521 ZGPATQ8N5A5 531 aaKnown RBP8.31□□□□□ -1.08
NFX1-202ENST00000379521 XAGE3Q8WTP9 111 aa8.31□□□□□ -1.08
NFX1-202ENST00000379521 COL9A3Q14050 684 aaPredicted RBP8.3□□□□□ -1.08
NFX1-202ENST00000379521 TNNI3KQ59H18 835 aa8.3□□□□□ -1.08
NFX1-202ENST00000379521 ZCRB1Q8TBF4 217 aaKnown RBP8.3□□□□□ -1.08
NFX1-202ENST00000379521 FPGT-TNNI3KV9GXZ4 949 aa8.3□□□□□ -1.08
NFX1-202ENST00000379521 ELP1O95163 1332 aa8.3□□□□□ -1.08
NFX1-202ENST00000379521 ERVV-1B6SEH8 477 aa8.3□□□□□ -1.08
NFX1-202ENST00000379521 IL2RBP14784 551 aa8.3□□□□□ -1.08
NFX1-202ENST00000379521 TOB2Q14106 344 aaPredicted RBP8.3□□□□□ -1.08
NFX1-202ENST00000379521 HS1BP3Q53T59 392 aa8.3□□□□□ -1.08
NFX1-202ENST00000379521 CASC1Q6TDU7 716 aa8.3□□□□□ -1.08
NFX1-202ENST00000379521 BARGINQ6ZT62 677 aa8.3□□□□□ -1.08
NFX1-202ENST00000379521 TLR7Q9NYK1 1049 aaKnown RBP8.3□□□□□ -1.08
NFX1-202ENST00000379521 MORC2Q9Y6X9 1032 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms