RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 TSPY26PQ9H489 355 aa24.92■■□□□ 1.58
SKI-201ENST00000378536 LIMCH1Q9UPQ0 1083 aa24.92■■□□□ 1.58
SKI-201ENST00000378536 RNF17Q9BXT8 1623 aaKnown RBP24.92■■□□□ 1.58
SKI-201ENST00000378536 ZFYP08048 801 aaPredicted RBP24.92■■□□□ 1.58
SKI-201ENST00000378536 MRE11P49959 708 aa24.92■■□□□ 1.58
SKI-201ENST00000378536 USP21Q9UK80 565 aa24.91■■□□□ 1.58
SKI-201ENST00000378536 METTL22Q9BUU2 404 aaPredicted RBP24.91■■□□□ 1.58
SKI-201ENST00000378536 FAM13BQ9NYF5 915 aa24.91■■□□□ 1.58
SKI-201ENST00000378536 BICC1Q9H694 974 aaKnown RBP24.91■■□□□ 1.58
SKI-201ENST00000378536 CCNL1Q9UK58 526 aaPredicted RBP24.91■■□□□ 1.58
SKI-201ENST00000378536 SLC12A7Q9Y666 1083 aa24.91■■□□□ 1.58
SKI-201ENST00000378536 PRIM1P49642 420 aaKnown RBP24.9■■□□□ 1.58
SKI-201ENST00000378536 HMG20BQ9P0W2 317 aa24.9■■□□□ 1.58
SKI-201ENST00000378536 NASPP49321 788 aaPredicted RBP24.9■■□□□ 1.58
SKI-201ENST00000378536 SPHKAPQ2M3C7 1700 aa24.9■■□□□ 1.58
SKI-201ENST00000378536 CTCFLQ8NI51 663 aaPredicted RBP24.9■■□□□ 1.58
SKI-201ENST00000378536 TRAPPC3LQ5T215 181 aa24.89■■□□□ 1.58
SKI-201ENST00000378536 ZBTB7BO15156 539 aaPredicted RBP24.89■■□□□ 1.58
SKI-201ENST00000378536 IFIT3O14879 490 aaKnown RBP24.89■■□□□ 1.58
SKI-201ENST00000378536 KRT18P05783 430 aaKnown RBP24.89■■□□□ 1.58
SKI-201ENST00000378536 GSTO1P78417 241 aa24.89■■□□□ 1.58
SKI-201ENST00000378536 PRR36Q9H6K5 1346 aa24.89■■□□□ 1.57
SKI-201ENST00000378536 ERVV-2B6SEH9 535 aa24.89■■□□□ 1.57
SKI-201ENST00000378536 TTC41PQ6P2S7 1318 aa24.88■■□□□ 1.57
SKI-201ENST00000378536 SEC63Q9UGP8 760 aaKnown RBP24.88■■□□□ 1.57
SKI-201ENST00000378536 C16orf71Q8IYS4 520 aaPredicted RBP24.88■■□□□ 1.57
SKI-201ENST00000378536 EIF4A1P60842 406 aaKnown RBP24.88■■□□□ 1.57
SKI-201ENST00000378536 USP19O94966 1318 aa24.88■■□□□ 1.57
SKI-201ENST00000378536 TNMDQ9H2S6 317 aa24.87■■□□□ 1.57
SKI-201ENST00000378536 KAT6BQ8WYB5 2073 aa24.87■■□□□ 1.57
SKI-201ENST00000378536 ZGPATQ8N5A5 531 aaKnown RBP24.87■■□□□ 1.57
SKI-201ENST00000378536 KIAA0232Q92628 1395 aa24.87■■□□□ 1.57
SKI-201ENST00000378536 EPS15P42566 896 aa24.87■■□□□ 1.57
SKI-201ENST00000378536 PHKG2P15735 406 aa24.86■■□□□ 1.57
SKI-201ENST00000378536 DNAJC5Q9H3Z4 198 aa24.86■■□□□ 1.57
SKI-201ENST00000378536 RIMBP3CA6NJZ7 1639 aa24.86■■□□□ 1.57
SKI-201ENST00000378536 RIMBP3BA6NNM3 1639 aa24.86■■□□□ 1.57
SKI-201ENST00000378536 RIMBP3Q9UFD9 1639 aa24.86■■□□□ 1.57
SKI-201ENST00000378536 PARP3Q9Y6F1 533 aa24.86■■□□□ 1.57
SKI-201ENST00000378536 PARP10Q53GL7 1025 aa24.85■■□□□ 1.57
SKI-201ENST00000378536 NEK1Q96PY6 1258 aa24.85■■□□□ 1.57
SKI-201ENST00000378536 CRNKL1Q9BZJ0 848 aaKnown RBP24.85■■□□□ 1.57
SKI-201ENST00000378536 ZNF496Q96IT1 587 aaPredicted RBP24.85■■□□□ 1.57
SKI-201ENST00000378536 RTL1A6NKG5 1358 aa24.85■■□□□ 1.57
SKI-201ENST00000378536 GOLGA8BA8MQT2 603 aa24.85■■□□□ 1.57
SKI-201ENST00000378536 HAND2P61296 217 aa24.85■■□□□ 1.57
SKI-201ENST00000378536 HMGN5P82970 282 aaKnown RBP24.85■■□□□ 1.57
SKI-201ENST00000378536 TFCP2Q12800 502 aa24.85■■□□□ 1.57
SKI-201ENST00000378536 CCDC191Q8NCU4 936 aa24.85■■□□□ 1.57
SKI-201ENST00000378536 A1BGP04217 495 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 PDE4BQ07343 736 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 MFSD6Q6ZSS7 791 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 SMC5Q8IY18 1101 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 NCOA7Q8NI08 942 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 IQSEC3Q9UPP2 1182 aaPredicted RBP24.84■■□□□ 1.57
SKI-201ENST00000378536 GOLGA8AA7E2F4 631 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 PDE4CQ08493 712 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 ARHGEF25Q86VW2 580 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 CCDC192P0DO97 292 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 CATIPQ7Z7H3 387 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 TBC1D32Q96NH3 1257 aa24.84■■□□□ 1.57
SKI-201ENST00000378536 CEP131Q9UPN4 1083 aa24.83■■□□□ 1.57
SKI-201ENST00000378536 ZNF804AQ7Z570 1209 aa24.83■■□□□ 1.57
SKI-201ENST00000378536 FERMT3Q86UX7 667 aa24.83■■□□□ 1.57
SKI-201ENST00000378536 ESYT1Q9BSJ8 1104 aa24.83■■□□□ 1.57
SKI-201ENST00000378536 TBC1D2Q9BYX2 928 aa24.83■■□□□ 1.57
SKI-201ENST00000378536 CCDC87Q9NVE4 849 aa24.83■■□□□ 1.57
SKI-201ENST00000378536 PAG1Q9NWQ8 432 aa24.83■■□□□ 1.57
SKI-201ENST00000378536 CYP7A1P22680 504 aa24.83■■□□□ 1.57
SKI-201ENST00000378536 IL17REQ8NFR9 667 aa24.83■■□□□ 1.57
SKI-201ENST00000378536 MCMDC2Q4G0Z9 681 aa24.83■■□□□ 1.56
SKI-201ENST00000378536 C8orf76Q96K31 380 aa24.83■■□□□ 1.56
SKI-201ENST00000378536 MCM4P33991 863 aa24.82■■□□□ 1.56
SKI-201ENST00000378536 FAM89AQ96GI7 184 aa24.82■■□□□ 1.56
SKI-201ENST00000378536 TRIM5Q9C035 493 aa24.82■■□□□ 1.56
SKI-201ENST00000378536 DNAJC10Q8IXB1 793 aa24.82■■□□□ 1.56
SKI-201ENST00000378536 ZNF76P36508 570 aa24.81■■□□□ 1.56
SKI-201ENST00000378536 TMEM67Q5HYA8 995 aa24.81■■□□□ 1.56
SKI-201ENST00000378536 HOMER1Q86YM7 354 aa24.81■■□□□ 1.56
SKI-201ENST00000378536 ZNF592Q92610 1267 aa24.81■■□□□ 1.56
SKI-201ENST00000378536 ANKRD2Q9GZV1 360 aa24.81■■□□□ 1.56
SKI-201ENST00000378536 SSRP1Q08945 709 aaKnown RBP24.8■■□□□ 1.56
SKI-201ENST00000378536 NBPF14Q5TI25 921 aa24.8■■□□□ 1.56
SKI-201ENST00000378536 MAGEC2Q9UBF1 373 aaPredicted RBP24.8■■□□□ 1.56
SKI-201ENST00000378536 ADGRB3O60242 1522 aa24.8■■□□□ 1.56
SKI-201ENST00000378536 SLC9C2Q5TAH2 1124 aa24.8■■□□□ 1.56
SKI-201ENST00000378536 HLA-DOAP06340 250 aa24.8■■□□□ 1.56
SKI-201ENST00000378536 PLEKHF1Q96S99 279 aa24.8■■□□□ 1.56
SKI-201ENST00000378536 DACH1Q9UI36 760 aa24.8■■□□□ 1.56
SKI-201ENST00000378536 SH3TC1Q8TE82 1336 aa24.8■■□□□ 1.56
SKI-201ENST00000378536 ANKARQ7Z5J8 1434 aa24.8■■□□□ 1.56
SKI-201ENST00000378536 CCT2P78371 535 aaKnown RBP24.8■■□□□ 1.56
SKI-201ENST00000378536 CCDC96Q2M329 555 aa24.8■■□□□ 1.56
SKI-201ENST00000378536 HELBQ8NG08 1087 aaPredicted RBP24.8■■□□□ 1.56
SKI-201ENST00000378536 IL27Q8NEV9 243 aa24.8■■□□□ 1.56
SKI-201ENST00000378536 ZNF335Q9H4Z2 1342 aaPredicted RBP24.79■■□□□ 1.56
SKI-201ENST00000378536 TSPY2A6NKD2 308 aa24.79■■□□□ 1.56
SKI-201ENST00000378536 CCDC82Q8N4S0 544 aa24.79■■□□□ 1.56
SKI-201ENST00000378536 FILIP1LQ4L180 1135 aa24.79■■□□□ 1.56
SKI-201ENST00000378536 SMC2O95347 1197 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms