RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CASC1Q6TDU7 716 aa18.42■□□□□ 0.54
FXN-201ENST00000377270 DRC1Q96MC2 740 aa18.42■□□□□ 0.54
FXN-201ENST00000377270 ADAMTSL3P82987 1691 aa18.42■□□□□ 0.54
FXN-201ENST00000377270 EIF4A1P60842 406 aaKnown RBP18.42■□□□□ 0.54
FXN-201ENST00000377270 PLEKHO1Q53GL0 409 aaPredicted RBP18.42■□□□□ 0.54
FXN-201ENST00000377270 ARHGEF25Q86VW2 580 aa18.42■□□□□ 0.54
FXN-201ENST00000377270 RNF214Q8ND24 703 aa18.42■□□□□ 0.54
FXN-201ENST00000377270 LRRFIP2Q9Y608 721 aaKnown RBP18.42■□□□□ 0.54
FXN-201ENST00000377270 TRIM66O15016 1216 aa18.41■□□□□ 0.54
FXN-201ENST00000377270 TEFQ10587 303 aa18.41■□□□□ 0.54
FXN-201ENST00000377270 SUFUQ9UMX1 484 aa18.41■□□□□ 0.54
FXN-201ENST00000377270 PDE1AP54750 535 aa18.41■□□□□ 0.54
FXN-201ENST00000377270 AKAP4Q5JQC9 854 aa18.41■□□□□ 0.54
FXN-201ENST00000377270 MPRIPQ6WCQ1 1025 aa18.41■□□□□ 0.54
FXN-201ENST00000377270 PROSER2Q86WR7 435 aaPredicted RBP18.41■□□□□ 0.54
FXN-201ENST00000377270 CREBRFQ8IUR6 639 aa18.41■□□□□ 0.54
FXN-201ENST00000377270 USP26Q9BXU7 913 aa18.41■□□□□ 0.54
FXN-201ENST00000377270 USP44Q9H0E7 712 aa18.41■□□□□ 0.54
FXN-201ENST00000377270 SPTLC3Q9NUV7 552 aa18.41■□□□□ 0.54
FXN-201ENST00000377270 KCNQ3O43525 872 aa18.4■□□□□ 0.54
FXN-201ENST00000377270 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
FXN-201ENST00000377270 CXorf56Q9H5V9 222 aa18.4■□□□□ 0.54
FXN-201ENST00000377270 CACNA1FO60840 1977 aa18.4■□□□□ 0.54
FXN-201ENST00000377270 BTBD11A6QL63 1104 aa18.39■□□□□ 0.54
FXN-201ENST00000377270 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.54
FXN-201ENST00000377270 SART3Q15020 963 aaKnown RBP18.39■□□□□ 0.54
FXN-201ENST00000377270 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.54
FXN-201ENST00000377270 OSBPL3Q9H4L5 887 aa18.39■□□□□ 0.54
FXN-201ENST00000377270 KRT28Q7Z3Y7 464 aa18.39■□□□□ 0.53
FXN-201ENST00000377270 ANKRD24Q8TF21 1146 aa18.39■□□□□ 0.53
FXN-201ENST00000377270 FAM212AQ96EL1 285 aa18.39■□□□□ 0.53
FXN-201ENST00000377270 ZNF446Q9NWS9 450 aa18.39■□□□□ 0.53
FXN-201ENST00000377270 JRKLQ9Y4A0 524 aa18.39■□□□□ 0.53
FXN-201ENST00000377270 ST7Q9NRC1 585 aa18.38■□□□□ 0.53
FXN-201ENST00000377270 RGPD2P0DJD1 1756 aa18.38■□□□□ 0.53
FXN-201ENST00000377270 GOLGA6L6A8MZA4 724 aa18.38■□□□□ 0.53
FXN-201ENST00000377270 MBD3O95983 291 aa18.38■□□□□ 0.53
FXN-201ENST00000377270 AMOTQ4VCS5 1084 aa18.38■□□□□ 0.53
FXN-201ENST00000377270 CHPF2Q9P2E5 772 aa18.38■□□□□ 0.53
FXN-201ENST00000377270 NSFL1CQ9UNZ2 370 aaKnown RBP18.38■□□□□ 0.53
FXN-201ENST00000377270 CCDC189A1A4V9 331 aa18.37■□□□□ 0.53
FXN-201ENST00000377270 KIF1CO43896 1103 aaKnown RBP18.37■□□□□ 0.53
FXN-201ENST00000377270 C1orf141Q5JVX7 400 aa18.37■□□□□ 0.53
FXN-201ENST00000377270 TSHZ3Q63HK5 1081 aa18.37■□□□□ 0.53
FXN-201ENST00000377270 SYT10Q6XYQ8 523 aa18.37■□□□□ 0.53
FXN-201ENST00000377270 TSPY26PQ9H489 355 aa18.37■□□□□ 0.53
FXN-201ENST00000377270 MYO1CO00159 1063 aa18.37■□□□□ 0.53
FXN-201ENST00000377270 NBPF11Q86T75 865 aa18.37■□□□□ 0.53
FXN-201ENST00000377270 SRCIN1Q9C0H9 1055 aa18.37■□□□□ 0.53
FXN-201ENST00000377270 TSGA10IPQ3SY00 556 aa18.36■□□□□ 0.53
FXN-201ENST00000377270 TPRNQ4KMQ1 711 aa18.36■□□□□ 0.53
FXN-201ENST00000377270 AXIN2Q9Y2T1 843 aa18.36■□□□□ 0.53
FXN-201ENST00000377270 ZDHHC9Q9Y397 364 aa18.36■□□□□ 0.53
FXN-201ENST00000377270 REC8O95072 547 aa18.36■□□□□ 0.53
FXN-201ENST00000377270 HOXB7P09629 217 aa18.36■□□□□ 0.53
FXN-201ENST00000377270 TTC12Q9H892 705 aaPredicted RBP18.36■□□□□ 0.53
FXN-201ENST00000377270 PXDNLA1KZ92 1463 aa18.36■□□□□ 0.53
FXN-201ENST00000377270 RNMTO43148 476 aaKnown RBP18.36■□□□□ 0.53
FXN-201ENST00000377270 ANXA1P04083 346 aa18.35■□□□□ 0.53
FXN-201ENST00000377270 CALR3Q96L12 384 aaKnown RBP18.35■□□□□ 0.53
FXN-201ENST00000377270 ZBTB12Q9Y330 459 aaPredicted RBP18.35■□□□□ 0.53
FXN-201ENST00000377270 PI4KAP2A4QPH2 592 aa18.35■□□□□ 0.53
FXN-201ENST00000377270 MX1P20591 662 aa18.35■□□□□ 0.53
FXN-201ENST00000377270 PI4KAP1Q8N8J0 262 aa18.35■□□□□ 0.53
FXN-201ENST00000377270 MED4Q9NPJ6 270 aa18.35■□□□□ 0.53
FXN-201ENST00000377270 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
FXN-201ENST00000377270 PHRF1Q9P1Y6 1649 aaKnown RBP18.34■□□□□ 0.53
FXN-201ENST00000377270 ERC2O15083 957 aa18.34■□□□□ 0.53
FXN-201ENST00000377270 SYCP1Q15431 976 aa18.34■□□□□ 0.53
FXN-201ENST00000377270 SALL3Q9BXA9 1300 aa18.34■□□□□ 0.53
FXN-201ENST00000377270 NBPF9Q3BBW0 867 aa18.34■□□□□ 0.53
FXN-201ENST00000377270 ZGPATQ8N5A5 531 aaKnown RBP18.34■□□□□ 0.53
FXN-201ENST00000377270 NOL10Q9BSC4 688 aaKnown RBP18.34■□□□□ 0.53
FXN-201ENST00000377270 C19orf44Q9H6X5 657 aa18.34■□□□□ 0.53
FXN-201ENST00000377270 LCMT1Q9UIC8 334 aa18.34■□□□□ 0.53
FXN-201ENST00000377270 SLIT3O75094 1523 aa18.33■□□□□ 0.53
FXN-201ENST00000377270 DNAAF4Q8WXU2 420 aa18.33■□□□□ 0.53
FXN-201ENST00000377270 RAD50Q92878 1312 aa18.33■□□□□ 0.53
FXN-201ENST00000377270 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
FXN-201ENST00000377270 PPP1R42Q7Z4L9 355 aa18.33■□□□□ 0.52
FXN-201ENST00000377270 MNS1Q8NEH6 495 aa18.32■□□□□ 0.52
FXN-201ENST00000377270 SSH3Q8TE77 659 aa18.32■□□□□ 0.52
FXN-201ENST00000377270 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.32■□□□□ 0.52
FXN-201ENST00000377270 PXDNQ92626 1479 aa18.32■□□□□ 0.52
FXN-201ENST00000377270 TTC36A6NLP5 189 aa18.32■□□□□ 0.52
FXN-201ENST00000377270 NBPF7P0C2Y1 421 aaPredicted RBP18.32■□□□□ 0.52
FXN-201ENST00000377270 BEND3Q5T5X7 828 aa18.32■□□□□ 0.52
FXN-201ENST00000377270 ZNF526Q8TF50 670 aaPredicted RBP18.32■□□□□ 0.52
FXN-201ENST00000377270 FAM53CQ9NYF3 392 aa18.32■□□□□ 0.52
FXN-201ENST00000377270 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
FXN-201ENST00000377270 NAA30Q147X3 362 aaPredicted RBP18.31■□□□□ 0.52
FXN-201ENST00000377270 NBPF10Q6P3W6 841 aaKnown RBP18.31■□□□□ 0.52
FXN-201ENST00000377270 RILPL2Q969X0 211 aa18.31■□□□□ 0.52
FXN-201ENST00000377270 IL1RAPL2Q9NP60 686 aa18.31■□□□□ 0.52
FXN-201ENST00000377270 KDM3BQ7LBC6 1761 aa18.31■□□□□ 0.52
FXN-201ENST00000377270 C1orf167Q5SNV9 1468 aa18.31■□□□□ 0.52
FXN-201ENST00000377270 SURF6O75683 361 aaKnown RBP18.31■□□□□ 0.52
FXN-201ENST00000377270 UVSSAQ2YD98 709 aa18.31■□□□□ 0.52
FXN-201ENST00000377270 MUM1L1Q5H9M0 696 aa18.31■□□□□ 0.52
FXN-201ENST00000377270 LRCH2Q5VUJ6 765 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms