RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SNRKQ9NRH2 765 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 ATP5J2-PTCD1G3V325 749 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 IARSP41252 1262 aaKnown RBP13.37□□□□□ -0.27
PTCH1-203ENST00000375274 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
PTCH1-203ENST00000375274 SPATA31E1Q6ZUB1 1445 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 MAP3K12Q12852 859 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 CCDC150Q8NCX0 1101 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 LRRC2Q9BYS8 371 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 DNAJC25Q9H1X3 360 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 SYCP1Q15431 976 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 CCDC102BQ68D86 513 aa13.37□□□□□ -0.27
PTCH1-203ENST00000375274 BLMP54132 1417 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-203ENST00000375274 RBSNQ9H1K0 784 aa13.36□□□□□ -0.27
PTCH1-203ENST00000375274 GOLGA6L9A6NEM1 432 aa13.36□□□□□ -0.27
PTCH1-203ENST00000375274 TYRO3Q06418 890 aa13.36□□□□□ -0.27
PTCH1-203ENST00000375274 A2MP01023 1474 aa13.36□□□□□ -0.27
PTCH1-203ENST00000375274 SHANK2Q9UPX8 1470 aa13.36□□□□□ -0.27
PTCH1-203ENST00000375274 CTTNBP2Q8WZ74 1663 aa13.36□□□□□ -0.27
PTCH1-203ENST00000375274 MICU3Q86XE3 530 aa13.36□□□□□ -0.27
PTCH1-203ENST00000375274 ZNF397Q8NF99 534 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-203ENST00000375274 MAP9Q49MG5 647 aa13.35□□□□□ -0.27
PTCH1-203ENST00000375274 A0A1W2PP64 1363 aa13.35□□□□□ -0.27
PTCH1-203ENST00000375274 ALDH1L1O75891 902 aa13.35□□□□□ -0.27
PTCH1-203ENST00000375274 SYT1P21579 422 aa13.35□□□□□ -0.27
PTCH1-203ENST00000375274 SSRP1Q08945 709 aaKnown RBP13.35□□□□□ -0.27
PTCH1-203ENST00000375274 PHAXQ9H814 394 aaKnown RBP13.35□□□□□ -0.27
PTCH1-203ENST00000375274 GNG11P61952 73 aa13.35□□□□□ -0.27
PTCH1-203ENST00000375274 SPA17Q15506 151 aa13.35□□□□□ -0.27
PTCH1-203ENST00000375274 CTCFLQ8NI51 663 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-203ENST00000375274 OTUD7AQ8TE49 926 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-203ENST00000375274 ZBTB3Q9H5J0 574 aa13.35□□□□□ -0.27
PTCH1-203ENST00000375274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
PTCH1-203ENST00000375274 DENND4BO75064 1496 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-203ENST00000375274 TRAPPC8Q9Y2L5 1435 aa13.35□□□□□ -0.27
PTCH1-203ENST00000375274 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
PTCH1-203ENST00000375274 IQCA1Q86XH1 822 aa13.35□□□□□ -0.27
PTCH1-203ENST00000375274 SOS1Q07889 1333 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-203ENST00000375274 GRM8O00222 908 aa13.34□□□□□ -0.27
PTCH1-203ENST00000375274 RAB11FIP4Q86YS3 637 aa13.34□□□□□ -0.27
PTCH1-203ENST00000375274 KRT222Q8N1A0 295 aa13.34□□□□□ -0.27
PTCH1-203ENST00000375274 NCOA7Q8NI08 942 aa13.34□□□□□ -0.27
PTCH1-203ENST00000375274 MRPS27Q92552 414 aaKnown RBP13.34□□□□□ -0.27
PTCH1-203ENST00000375274 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTCH1-203ENST00000375274 USP8P40818 1118 aa13.34□□□□□ -0.27
PTCH1-203ENST00000375274 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
PTCH1-203ENST00000375274 TMX1Q9H3N1 280 aa13.34□□□□□ -0.27
PTCH1-203ENST00000375274 TTC41PQ6P2S7 1318 aa13.34□□□□□ -0.27
PTCH1-203ENST00000375274 SYKP43405 635 aa13.34□□□□□ -0.27
PTCH1-203ENST00000375274 JARID2Q92833 1246 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-203ENST00000375274 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-203ENST00000375274 RNF41Q9H4P4 317 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-203ENST00000375274 KCNG4Q8TDN1 519 aa13.34□□□□□ -0.27
PTCH1-203ENST00000375274 TRIM35Q9UPQ4 493 aa13.34□□□□□ -0.27
PTCH1-203ENST00000375274 KLF18A0A0U1RQI7 1052 aa13.33□□□□□ -0.28
PTCH1-203ENST00000375274 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTCH1-203ENST00000375274 TAF4BQ92750 862 aa13.33□□□□□ -0.28
PTCH1-203ENST00000375274 PRM3Q9NNZ6 103 aa13.33□□□□□ -0.28
PTCH1-203ENST00000375274 UBASH3AP57075 661 aa13.33□□□□□ -0.28
PTCH1-203ENST00000375274 LDHAL6AQ6ZMR3 332 aa13.33□□□□□ -0.28
PTCH1-203ENST00000375274 PA2G4Q9UQ80 394 aaKnown RBP13.33□□□□□ -0.28
PTCH1-203ENST00000375274 DNMT1P26358 1616 aaKnown RBP13.33□□□□□ -0.28
PTCH1-203ENST00000375274 POGZQ7Z3K3 1410 aa13.33□□□□□ -0.28
PTCH1-203ENST00000375274 RANBP6O60518 1105 aaKnown RBP13.33□□□□□ -0.28
PTCH1-203ENST00000375274 ZNF445P59923 1031 aa13.33□□□□□ -0.28
PTCH1-203ENST00000375274 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-203ENST00000375274 TRERF1Q96PN7 1200 aa13.33□□□□□ -0.28
PTCH1-203ENST00000375274 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.28
PTCH1-203ENST00000375274 TMEM67Q5HYA8 995 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 KSR2Q6VAB6 950 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 Q6ZUG5 572 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 CCDC144CPQ8IYA2 1237 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 TTC21AQ8NDW8 1320 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 YEATS4O95619 227 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 PTGS1P23219 599 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 MCM3P25205 808 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 NMIQ13287 307 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-203ENST00000375274 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 AOPEPQ8N6M6 819 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 ZSWIM4Q9H7M6 989 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 CWC25Q9NXE8 425 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-203ENST00000375274 DNAI1Q9UI46 699 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 CCDC12Q8WUD4 166 aaPredicted RBP13.32□□□□□ -0.28
PTCH1-203ENST00000375274 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
PTCH1-203ENST00000375274 TRMT112Q9UI30 125 aaKnown RBP13.32□□□□□ -0.28
PTCH1-203ENST00000375274 IFNL2Q8IZJ0 200 aa13.31□□□□□ -0.28
PTCH1-203ENST00000375274 LINS1Q8NG48 757 aa13.31□□□□□ -0.28
PTCH1-203ENST00000375274 ZFYVE9O95405 1425 aa13.31□□□□□ -0.28
PTCH1-203ENST00000375274 ANKRD18BA2A2Z9 1011 aa13.31□□□□□ -0.28
PTCH1-203ENST00000375274 CREB3L3Q68CJ9 461 aa13.31□□□□□ -0.28
PTCH1-203ENST00000375274 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
PTCH1-203ENST00000375274 KANK3Q6NY19 840 aa13.31□□□□□ -0.28
PTCH1-203ENST00000375274 COPS6Q7L5N1 327 aa13.31□□□□□ -0.28
PTCH1-203ENST00000375274 ADAMTS12P58397 1594 aa13.31□□□□□ -0.28
PTCH1-203ENST00000375274 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 PAFAH1B1P43034 410 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 ABCA5Q8WWZ7 1642 aa13.3□□□□□ -0.28
PTCH1-203ENST00000375274 SLU7O95391 586 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms