RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 HDAC5Q9UQL6 1122 aa14.78□□□□□ -0.04
HMGCL-202ENST00000374487 MRC1P22897 1456 aa14.78□□□□□ -0.04
HMGCL-202ENST00000374487 PHF14O94880 888 aa14.77□□□□□ -0.04
HMGCL-202ENST00000374487 DDX58O95786 925 aaKnown RBP14.77□□□□□ -0.04
HMGCL-202ENST00000374487 DDIT3P35638 169 aa14.77□□□□□ -0.04
HMGCL-202ENST00000374487 ZNF790Q6PG37 636 aa14.77□□□□□ -0.04
HMGCL-202ENST00000374487 SIPA1L3O60292 1781 aaPredicted RBP14.77□□□□□ -0.05
HMGCL-202ENST00000374487 ALDH1L1O75891 902 aa14.77□□□□□ -0.05
HMGCL-202ENST00000374487 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.05
HMGCL-202ENST00000374487 RHPN1Q8TCX5 695 aa14.77□□□□□ -0.05
HMGCL-202ENST00000374487 KIF1BPQ96EK5 621 aa14.77□□□□□ -0.05
HMGCL-202ENST00000374487 AIMP1Q12904 312 aaKnown RBP14.76□□□□□ -0.05
HMGCL-202ENST00000374487 COL23A1Q86Y22 540 aaPredicted RBP14.76□□□□□ -0.05
HMGCL-202ENST00000374487 NUTM1Q86Y26 1132 aa14.76□□□□□ -0.05
HMGCL-202ENST00000374487 DNAJC10Q8IXB1 793 aa14.76□□□□□ -0.05
HMGCL-202ENST00000374487 ZNF496Q96IT1 587 aaPredicted RBP14.76□□□□□ -0.05
HMGCL-202ENST00000374487 DDX21Q9NR30 783 aaKnown RBP eCLIP14.76□□□□□ -0.05
HMGCL-202ENST00000374487 C5P01031 1676 aa14.76□□□□□ -0.05
HMGCL-202ENST00000374487 ST18O60284 1047 aa14.75□□□□□ -0.05
HMGCL-202ENST00000374487 OS9Q13438 667 aaPredicted RBP14.75□□□□□ -0.05
HMGCL-202ENST00000374487 N4BP2Q86UW6 1770 aaPredicted RBP14.75□□□□□ -0.05
HMGCL-202ENST00000374487 AOX1Q06278 1338 aa14.75□□□□□ -0.05
HMGCL-202ENST00000374487 TAF1LQ8IZX4 1826 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 TUBGCP6Q96RT7 1819 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 CWF19L2Q2TBE0 894 aaKnown RBP14.74□□□□□ -0.05
HMGCL-202ENST00000374487 ESYT1Q9BSJ8 1104 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 KCPQ6ZWJ8 1503 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 DDX11L8A8MPP1 907 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 GNPATO15228 680 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 CHMLP26374 656 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 MSL1Q68DK7 614 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 TTC5Q8N0Z6 440 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 LINS1Q8NG48 757 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 C4BP0C0L5 1744 aa14.74□□□□□ -0.05
HMGCL-202ENST00000374487 MCCP23508 829 aa14.73□□□□□ -0.05
HMGCL-202ENST00000374487 RIC3Q7Z5B4 369 aa14.73□□□□□ -0.05
HMGCL-202ENST00000374487 AK7Q96M32 723 aa14.73□□□□□ -0.05
HMGCL-202ENST00000374487 GBP4Q96PP9 640 aa14.73□□□□□ -0.05
HMGCL-202ENST00000374487 MYL6BP14649 208 aa14.73□□□□□ -0.05
HMGCL-202ENST00000374487 TNPO1Q92973 898 aaKnown RBP14.73□□□□□ -0.05
HMGCL-202ENST00000374487 CASZ1Q86V15 1759 aa14.73□□□□□ -0.05
HMGCL-202ENST00000374487 PIP4K2AP48426 406 aaPredicted RBP14.72□□□□□ -0.05
HMGCL-202ENST00000374487 MTX1Q13505 466 aa14.72□□□□□ -0.05
HMGCL-202ENST00000374487 RAB3GAP1Q15042 981 aa14.72□□□□□ -0.05
HMGCL-202ENST00000374487 ANO2Q9NQ90 1003 aa14.72□□□□□ -0.05
HMGCL-202ENST00000374487 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.71□□□□□ -0.05
HMGCL-202ENST00000374487 GRM8O00222 908 aa14.71□□□□□ -0.05
HMGCL-202ENST00000374487 TRAK2O60296 914 aa14.71□□□□□ -0.05
HMGCL-202ENST00000374487 CRKLP46109 303 aaKnown RBP14.71□□□□□ -0.05
HMGCL-202ENST00000374487 NEXNQ0ZGT2 675 aa14.71□□□□□ -0.05
HMGCL-202ENST00000374487 PDIA6Q15084 440 aa14.71□□□□□ -0.05
HMGCL-202ENST00000374487 INTS5Q6P9B9 1019 aaKnown RBP14.71□□□□□ -0.05
HMGCL-202ENST00000374487 CLASRPQ8N2M8 674 aaKnown RBP14.71□□□□□ -0.05
HMGCL-202ENST00000374487 TJP1Q07157 1748 aa14.71□□□□□ -0.06
HMGCL-202ENST00000374487 SNRPA1P09661 255 aaKnown RBP14.7□□□□□ -0.06
HMGCL-202ENST00000374487 PTGER2P43116 358 aa14.7□□□□□ -0.06
HMGCL-202ENST00000374487 MAP4K4O95819 1239 aaPredicted RBP14.7□□□□□ -0.06
HMGCL-202ENST00000374487 CYP19A1P11511 503 aaPredicted RBP14.7□□□□□ -0.06
HMGCL-202ENST00000374487 ERC1Q8IUD2 1116 aa14.7□□□□□ -0.06
HMGCL-202ENST00000374487 MYH14Q7Z406 1995 aaKnown RBP14.69□□□□□ -0.06
HMGCL-202ENST00000374487 CNTROBQ8N137 903 aa14.69□□□□□ -0.06
HMGCL-202ENST00000374487 PI4K2BQ8TCG2 481 aa14.69□□□□□ -0.06
HMGCL-202ENST00000374487 XAGE3Q8WTP9 111 aa14.69□□□□□ -0.06
HMGCL-202ENST00000374487 GZF1Q9H116 711 aaPredicted RBP14.69□□□□□ -0.06
HMGCL-202ENST00000374487 USP16Q9Y5T5 823 aa14.69□□□□□ -0.06
HMGCL-202ENST00000374487 NEK4P51957 841 aa14.68□□□□□ -0.06
HMGCL-202ENST00000374487 COPS6Q7L5N1 327 aa14.68□□□□□ -0.06
HMGCL-202ENST00000374487 FMNL2Q96PY5 1086 aa14.68□□□□□ -0.06
HMGCL-202ENST00000374487 SPON1Q9HCB6 807 aa14.68□□□□□ -0.06
HMGCL-202ENST00000374487 ZBTB1Q9Y2K1 713 aa14.68□□□□□ -0.06
HMGCL-202ENST00000374487 ARHGEF1Q92888 912 aaKnown RBP14.68□□□□□ -0.06
HMGCL-202ENST00000374487 COL5A3P25940 1745 aaPredicted RBP14.68□□□□□ -0.06
HMGCL-202ENST00000374487 A1BGP04217 495 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
HMGCL-202ENST00000374487 GPATCH3Q96I76 525 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 SUCLG2Q96I99 432 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 BICC1Q9H694 974 aaKnown RBP14.67□□□□□ -0.06
HMGCL-202ENST00000374487 SRP68Q9UHB9 627 aaKnown RBP14.67□□□□□ -0.06
HMGCL-202ENST00000374487 PA2G4Q9UQ80 394 aaKnown RBP14.67□□□□□ -0.06
HMGCL-202ENST00000374487 TTC41PQ6P2S7 1318 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 UBR2Q8IWV8 1755 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 UBR3Q6ZT12 1888 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 GLRX3O76003 335 aaKnown RBP14.67□□□□□ -0.06
HMGCL-202ENST00000374487 PTMSP20962 102 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 ANAPC15P60006 121 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 G3BP1Q13283 466 aaKnown RBP eCLIP14.67□□□□□ -0.06
HMGCL-202ENST00000374487 ANKRD13DQ6ZTN6 518 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 SGIP1Q9BQI5 828 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 MTFR1LQ9H019 292 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 CWC22Q9HCG8 908 aaKnown RBP14.67□□□□□ -0.06
HMGCL-202ENST00000374487 UTYO14607 1347 aa14.67□□□□□ -0.06
HMGCL-202ENST00000374487 IGKV5-2P06315 115 aa14.66□□□□□ -0.06
HMGCL-202ENST00000374487 NUCB2P80303 420 aa14.66□□□□□ -0.06
HMGCL-202ENST00000374487 MYD88Q99836 296 aa14.66□□□□□ -0.06
HMGCL-202ENST00000374487 RTCBQ9Y3I0 505 aaKnown RBP14.66□□□□□ -0.06
HMGCL-202ENST00000374487 CNTNAP4Q9C0A0 1308 aa14.66□□□□□ -0.06
HMGCL-202ENST00000374487 GOLGA6L22H0YM25 854 aa14.66□□□□□ -0.06
HMGCL-202ENST00000374487 RPS6KA4O75676 772 aa14.66□□□□□ -0.06
HMGCL-202ENST00000374487 SSFA2P28290 1259 aa14.66□□□□□ -0.06
HMGCL-202ENST00000374487 MCM2P49736 904 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms