RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 USP44Q9H0E7 712 aa14.13□□□□□ -0.15
CSGALNACT2-201ENST00000374466 CWC25Q9NXE8 425 aaPredicted RBP14.13□□□□□ -0.15
CSGALNACT2-201ENST00000374466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
CSGALNACT2-201ENST00000374466 RLBP1P12271 317 aa14.12□□□□□ -0.15
CSGALNACT2-201ENST00000374466 HOXA10P31260 410 aaPredicted RBP14.12□□□□□ -0.15
CSGALNACT2-201ENST00000374466 PPP1R42Q7Z4L9 355 aa14.12□□□□□ -0.15
CSGALNACT2-201ENST00000374466 NEXNQ0ZGT2 675 aa14.11□□□□□ -0.15
CSGALNACT2-201ENST00000374466 EIF2S2P20042 333 aaKnown RBP14.11□□□□□ -0.15
CSGALNACT2-201ENST00000374466 RPAP2Q8IXW5 612 aaPredicted RBP14.11□□□□□ -0.15
CSGALNACT2-201ENST00000374466 MTFR1LQ9H019 292 aa14.11□□□□□ -0.15
CSGALNACT2-201ENST00000374466 GRM8O00222 908 aa14.11□□□□□ -0.15
CSGALNACT2-201ENST00000374466 IGSF3O75054 1194 aa14.11□□□□□ -0.15
CSGALNACT2-201ENST00000374466 HLFQ16534 295 aa14.11□□□□□ -0.15
CSGALNACT2-201ENST00000374466 TMEM57Q8N5G2 664 aa14.11□□□□□ -0.15
CSGALNACT2-201ENST00000374466 NOP58Q9Y2X3 529 aaKnown RBP14.11□□□□□ -0.15
CSGALNACT2-201ENST00000374466 FER1L6Q2WGJ9 1857 aa14.1□□□□□ -0.15
CSGALNACT2-201ENST00000374466 TMC4Q7Z404 712 aa14.1□□□□□ -0.15
CSGALNACT2-201ENST00000374466 FOXO4P98177 505 aa14.1□□□□□ -0.15
CSGALNACT2-201ENST00000374466 FKBP5Q13451 457 aaPredicted RBP14.1□□□□□ -0.15
CSGALNACT2-201ENST00000374466 GRIPAP1Q4V328 841 aa14.1□□□□□ -0.15
CSGALNACT2-201ENST00000374466 KAZALD1Q96I82 304 aa14.1□□□□□ -0.15
CSGALNACT2-201ENST00000374466 TICAM2Q86XR7 235 aa14.09□□□□□ -0.15
CSGALNACT2-201ENST00000374466 RFC4P35249 363 aa14.08□□□□□ -0.15
CSGALNACT2-201ENST00000374466 RIC3Q7Z5B4 369 aa14.08□□□□□ -0.15
CSGALNACT2-201ENST00000374466 SSH3Q8TE77 659 aa14.08□□□□□ -0.15
CSGALNACT2-201ENST00000374466 ABCC12Q96J65 1359 aa14.08□□□□□ -0.16
CSGALNACT2-201ENST00000374466 ZPR1O75312 459 aa14.08□□□□□ -0.16
CSGALNACT2-201ENST00000374466 ANKRD44Q8N8A2 993 aa14.08□□□□□ -0.16
CSGALNACT2-201ENST00000374466 CIAO1O76071 339 aa14.08□□□□□ -0.16
CSGALNACT2-201ENST00000374466 UTP14AQ9BVJ6 771 aaKnown RBP14.08□□□□□ -0.16
CSGALNACT2-201ENST00000374466 CANXP27824 592 aaKnown RBP14.07□□□□□ -0.16
CSGALNACT2-201ENST00000374466 NFIXQ14938 502 aa14.07□□□□□ -0.16
CSGALNACT2-201ENST00000374466 TBC1D9BQ66K14 1250 aa14.07□□□□□ -0.16
CSGALNACT2-201ENST00000374466 DICER1Q9UPY3 1922 aaKnown RBP14.07□□□□□ -0.16
CSGALNACT2-201ENST00000374466 ELL2O00472 640 aaPredicted RBP14.07□□□□□ -0.16
CSGALNACT2-201ENST00000374466 RFX5P48382 616 aaPredicted RBP14.07□□□□□ -0.16
CSGALNACT2-201ENST00000374466 USPL1Q5W0Q7 1092 aa14.07□□□□□ -0.16
CSGALNACT2-201ENST00000374466 KDM2BQ8NHM5 1336 aa14.07□□□□□ -0.16
CSGALNACT2-201ENST00000374466 DEFB132Q7Z7B7 95 aa14.07□□□□□ -0.16
CSGALNACT2-201ENST00000374466 MYL6BP14649 208 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 PTGER2P43116 358 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 DDR1Q08345 913 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 BRIP1Q9BX63 1249 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 MAST2Q6P0Q8 1798 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 PDE8AO60658 829 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 ATP8B2P98198 1209 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 STYK1Q6J9G0 422 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 DOCK2Q92608 1830 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 SH3TC1Q8TE82 1336 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 COL4A1P02462 1669 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 SUSD4Q5VX71 490 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 C15orf52Q6ZUT6 534 aaKnown RBP14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 YTHDC1Q96MU7 727 aaKnown RBP14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 CRAMP1Q96RY5 1269 aa14.06□□□□□ -0.16
CSGALNACT2-201ENST00000374466 CD2APQ9Y5K6 639 aa14.05□□□□□ -0.16
CSGALNACT2-201ENST00000374466 GPR108Q9NPR9 543 aa14.05□□□□□ -0.16
CSGALNACT2-201ENST00000374466 COPRSQ9NQ92 184 aa14.05□□□□□ -0.16
CSGALNACT2-201ENST00000374466 FKBP8Q14318 412 aa14.05□□□□□ -0.16
CSGALNACT2-201ENST00000374466 CLUAP1Q96AJ1 413 aa14.05□□□□□ -0.16
CSGALNACT2-201ENST00000374466 MYD88Q99836 296 aa14.05□□□□□ -0.16
CSGALNACT2-201ENST00000374466 TFCP2L1Q9NZI6 479 aa14.05□□□□□ -0.16
CSGALNACT2-201ENST00000374466 GNAI2P04899 355 aa14.04□□□□□ -0.16
CSGALNACT2-201ENST00000374466 TGFB2P61812 414 aa14.04□□□□□ -0.16
CSGALNACT2-201ENST00000374466 VPS33BQ9H267 617 aa14.04□□□□□ -0.16
CSGALNACT2-201ENST00000374466 SUPT16HQ9Y5B9 1047 aaKnown RBP14.04□□□□□ -0.16
CSGALNACT2-201ENST00000374466 C20orf194Q5TEA3 1177 aa14.03□□□□□ -0.16
CSGALNACT2-201ENST00000374466 SETDB2Q96T68 719 aa14.03□□□□□ -0.16
CSGALNACT2-201ENST00000374466 CEP85Q6P2H3 762 aa14.03□□□□□ -0.16
CSGALNACT2-201ENST00000374466 TPTE2Q6XPS3 522 aa14.03□□□□□ -0.16
CSGALNACT2-201ENST00000374466 PRR5LQ6MZQ0 368 aa14.03□□□□□ -0.16
CSGALNACT2-201ENST00000374466 FTSJ3Q8IY81 847 aaKnown RBP14.03□□□□□ -0.16
CSGALNACT2-201ENST00000374466 IRS2Q9Y4H2 1338 aa14.02□□□□□ -0.16
CSGALNACT2-201ENST00000374466 ANXA1P04083 346 aa14.02□□□□□ -0.17
CSGALNACT2-201ENST00000374466 CTSWP56202 376 aa14.02□□□□□ -0.17
CSGALNACT2-201ENST00000374466 SMC5Q8IY18 1101 aa14.02□□□□□ -0.17
CSGALNACT2-201ENST00000374466 SRP68Q9UHB9 627 aaKnown RBP14.02□□□□□ -0.17
CSGALNACT2-201ENST00000374466 EP400Q96L91 3159 aa14.01□□□□□ -0.17
CSGALNACT2-201ENST00000374466 F6X3S4 739 aa14.01□□□□□ -0.17
CSGALNACT2-201ENST00000374466 TBC1D2BQ9UPU7 963 aa14.01□□□□□ -0.17
CSGALNACT2-201ENST00000374466 TNNQ9UQP3 1299 aa14.01□□□□□ -0.17
CSGALNACT2-201ENST00000374466 PDS5AQ29RF7 1337 aaKnown RBP14.01□□□□□ -0.17
CSGALNACT2-201ENST00000374466 SUCLG2Q96I99 432 aa14.01□□□□□ -0.17
CSGALNACT2-201ENST00000374466 CRBNQ96SW2 442 aa14.01□□□□□ -0.17
CSGALNACT2-201ENST00000374466 NIP7Q9Y221 180 aaKnown RBP eCLIP14.01□□□□□ -0.17
CSGALNACT2-201ENST00000374466 LTBP3Q9NS15 1303 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 RAB11FIP3O75154 756 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 SERPINB2P05120 415 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 TTLL11Q8NHH1 800 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 PANK1Q8TE04 598 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 DCTPP1Q9H773 170 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 PDE6BP35913 854 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 GCC1Q96CN9 775 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 MEIS3Q99687 375 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 ZBTB3Q9H5J0 574 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 PODXL2Q9NZ53 605 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 UBTFL1P0CB47 393 aaPredicted RBP14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 TMED8Q6PL24 325 aaPredicted RBP14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 SIRT2Q8IXJ6 389 aa14□□□□□ -0.17
CSGALNACT2-201ENST00000374466 BCL2L13Q9BXK5 485 aa13.99□□□□□ -0.17
CSGALNACT2-201ENST00000374466 AOX1Q06278 1338 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms