RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 TSHZ2Q9NRE2 1034 aa22.06■■□□□ 1.12
C9orf43-202ENST00000374165 CWC25Q9NXE8 425 aaPredicted RBP22.06■■□□□ 1.12
C9orf43-202ENST00000374165 HMGB2P26583 209 aaKnown RBP22.06■■□□□ 1.12
C9orf43-202ENST00000374165 BICDL1Q6ZP65 573 aa22.06■■□□□ 1.12
C9orf43-202ENST00000374165 NIP7Q9Y221 180 aaKnown RBP eCLIP22.06■■□□□ 1.12
C9orf43-202ENST00000374165 HSP90AB3PQ58FF7 597 aa22.05■■□□□ 1.12
C9orf43-202ENST00000374165 UBE3BQ7Z3V4 1068 aa22.05■■□□□ 1.12
C9orf43-202ENST00000374165 PDGFDQ9GZP0 370 aaPredicted RBP22.05■■□□□ 1.12
C9orf43-202ENST00000374165 UTYO14607 1347 aa22.05■■□□□ 1.12
C9orf43-202ENST00000374165 UBTFL1P0CB47 393 aaPredicted RBP22.04■■□□□ 1.12
C9orf43-202ENST00000374165 GYS1P13807 737 aa22.04■■□□□ 1.12
C9orf43-202ENST00000374165 KAZALD1Q96I82 304 aa22.04■■□□□ 1.12
C9orf43-202ENST00000374165 LRRFIP2Q9Y608 721 aaKnown RBP22.04■■□□□ 1.12
C9orf43-202ENST00000374165 FAM177BA6PVY3 158 aa22.04■■□□□ 1.12
C9orf43-202ENST00000374165 GNAI3P08754 354 aa22.04■■□□□ 1.12
C9orf43-202ENST00000374165 CASP7P55210 303 aa22.04■■□□□ 1.12
C9orf43-202ENST00000374165 SUSD4Q5VX71 490 aa22.04■■□□□ 1.12
C9orf43-202ENST00000374165 ZNF652Q9Y2D9 606 aa22.04■■□□□ 1.12
C9orf43-202ENST00000374165 H7C1W4 665 aa22.03■■□□□ 1.12
C9orf43-202ENST00000374165 SIRT2Q8IXJ6 389 aa22.03■■□□□ 1.12
C9orf43-202ENST00000374165 FAM89AQ96GI7 184 aa22.03■■□□□ 1.12
C9orf43-202ENST00000374165 STK32BQ9NY57 414 aa22.03■■□□□ 1.12
C9orf43-202ENST00000374165 MSH5O43196 834 aa22.02■■□□□ 1.12
C9orf43-202ENST00000374165 GNAI2P04899 355 aa22.02■■□□□ 1.12
C9orf43-202ENST00000374165 SUCLG2Q96I99 432 aa22.02■■□□□ 1.12
C9orf43-202ENST00000374165 IBTKQ9P2D0 1353 aaPredicted RBP22.02■■□□□ 1.12
C9orf43-202ENST00000374165 SRCAPQ6ZRS2 3230 aa22.01■■□□□ 1.11
C9orf43-202ENST00000374165 IGHDP01880 384 aa22.01■■□□□ 1.11
C9orf43-202ENST00000374165 EPHA10Q5JZY3 1008 aa22.01■■□□□ 1.11
C9orf43-202ENST00000374165 CHMP4BQ9H444 224 aaKnown RBP22.01■■□□□ 1.11
C9orf43-202ENST00000374165 AAMPQ13685 434 aa22.01■■□□□ 1.11
C9orf43-202ENST00000374165 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
C9orf43-202ENST00000374165 NFIXQ14938 502 aa22■■□□□ 1.11
C9orf43-202ENST00000374165 TRMT112Q9UI30 125 aaKnown RBP22■■□□□ 1.11
C9orf43-202ENST00000374165 RGL2O15211 777 aa21.99■■□□□ 1.11
C9orf43-202ENST00000374165 CEP85Q6P2H3 762 aa21.99■■□□□ 1.11
C9orf43-202ENST00000374165 ZBTB38Q8NAP3 1195 aaPredicted RBP21.99■■□□□ 1.11
C9orf43-202ENST00000374165 PCCAP05165 728 aaPredicted RBP21.98■■□□□ 1.11
C9orf43-202ENST00000374165 NUTM1Q86Y26 1132 aa21.98■■□□□ 1.11
C9orf43-202ENST00000374165 FLAD1Q8NFF5 587 aa21.98■■□□□ 1.11
C9orf43-202ENST00000374165 SETDB2Q96T68 719 aa21.98■■□□□ 1.11
C9orf43-202ENST00000374165 BICC1Q9H694 974 aaKnown RBP21.98■■□□□ 1.11
C9orf43-202ENST00000374165 QSER1Q2KHR3 1735 aa21.98■■□□□ 1.11
C9orf43-202ENST00000374165 NTSR2O95665 410 aa21.97■■□□□ 1.11
C9orf43-202ENST00000374165 PNMA6EA0A0J9YXQ4 647 aa21.97■■□□□ 1.11
C9orf43-202ENST00000374165 PARP10Q53GL7 1025 aa21.97■■□□□ 1.11
C9orf43-202ENST00000374165 UTP14AQ9BVJ6 771 aaKnown RBP21.96■■□□□ 1.11
C9orf43-202ENST00000374165 COL24A1Q17RW2 1714 aa21.96■■□□□ 1.11
C9orf43-202ENST00000374165 TM4SF1P30408 202 aa21.96■■□□□ 1.11
C9orf43-202ENST00000374165 MSL1Q68DK7 614 aa21.96■■□□□ 1.11
C9orf43-202ENST00000374165 ANKRD44Q8N8A2 993 aa21.96■■□□□ 1.11
C9orf43-202ENST00000374165 FOXO4P98177 505 aa21.95■■□□□ 1.1
C9orf43-202ENST00000374165 CCDC24Q8N4L8 307 aa21.95■■□□□ 1.1
C9orf43-202ENST00000374165 DDR1Q08345 913 aa21.94■■□□□ 1.1
C9orf43-202ENST00000374165 PPP1R42Q7Z4L9 355 aa21.94■■□□□ 1.1
C9orf43-202ENST00000374165 RPAP2Q8IXW5 612 aaPredicted RBP21.94■■□□□ 1.1
C9orf43-202ENST00000374165 KDM2BQ8NHM5 1336 aa21.93■■□□□ 1.1
C9orf43-202ENST00000374165 SH3TC1Q8TE82 1336 aa21.93■■□□□ 1.1
C9orf43-202ENST00000374165 IRS4O14654 1257 aaPredicted RBP21.93■■□□□ 1.1
C9orf43-202ENST00000374165 HCLS1P14317 486 aaPredicted RBP21.93■■□□□ 1.1
C9orf43-202ENST00000374165 ATP8B2P98198 1209 aa21.93■■□□□ 1.1
C9orf43-202ENST00000374165 ERFEQ4G0M1 354 aa21.93■■□□□ 1.1
C9orf43-202ENST00000374165 NBPF5PQ86XG9 351 aaPredicted RBP21.92■■□□□ 1.1
C9orf43-202ENST00000374165 DDX60Q8IY21 1712 aaKnown RBP21.92■■□□□ 1.1
C9orf43-202ENST00000374165 HDAC1Q13547 482 aaPredicted RBP21.92■■□□□ 1.1
C9orf43-202ENST00000374165 NLGN1Q8N2Q7 840 aa21.92■■□□□ 1.1
C9orf43-202ENST00000374165 CDHR2Q9BYE9 1310 aa21.91■■□□□ 1.1
C9orf43-202ENST00000374165 CARMIL3Q8ND23 1372 aa21.91■■□□□ 1.1
C9orf43-202ENST00000374165 RABL6Q3YEC7 729 aaPredicted RBP21.91■■□□□ 1.1
C9orf43-202ENST00000374165 LMBR1LQ6UX01 489 aa21.91■■□□□ 1.1
C9orf43-202ENST00000374165 MYH3P11055 1940 aa21.91■■□□□ 1.1
C9orf43-202ENST00000374165 POLRMTO00411 1230 aaKnown RBP21.9■■□□□ 1.1
C9orf43-202ENST00000374165 SRGAP3O43295 1099 aa21.9■■□□□ 1.1
C9orf43-202ENST00000374165 CCDC85AQ96PX6 553 aaPredicted RBP21.9■■□□□ 1.1
C9orf43-202ENST00000374165 ABCC12Q96J65 1359 aa21.9■■□□□ 1.1
C9orf43-202ENST00000374165 MTX1Q13505 466 aa21.9■■□□□ 1.1
C9orf43-202ENST00000374165 R3HDM1Q15032 1099 aaKnown RBP21.9■■□□□ 1.1
C9orf43-202ENST00000374165 TPTE2Q6XPS3 522 aa21.89■■□□□ 1.1
C9orf43-202ENST00000374165 CENPQQ7L2Z9 268 aaPredicted RBP21.89■■□□□ 1.1
C9orf43-202ENST00000374165 RWDD1Q9H446 243 aaPredicted RBP21.89■■□□□ 1.1
C9orf43-202ENST00000374165 SERPINB2P05120 415 aa21.89■■□□□ 1.09
C9orf43-202ENST00000374165 MMP10P09238 476 aa21.89■■□□□ 1.09
C9orf43-202ENST00000374165 C3orf67Q6ZVT6 689 aa21.89■■□□□ 1.09
C9orf43-202ENST00000374165 SSH3Q8TE77 659 aa21.89■■□□□ 1.09
C9orf43-202ENST00000374165 PLA2G12BQ9BX93 195 aa21.89■■□□□ 1.09
C9orf43-202ENST00000374165 HDAC5Q9UQL6 1122 aa21.89■■□□□ 1.09
C9orf43-202ENST00000374165 CASZ1Q86V15 1759 aa21.88■■□□□ 1.09
C9orf43-202ENST00000374165 GTF2E1P29083 439 aaPredicted RBP21.88■■□□□ 1.09
C9orf43-202ENST00000374165 TTLL11Q8NHH1 800 aa21.88■■□□□ 1.09
C9orf43-202ENST00000374165 KLHDC4Q8TBB5 520 aa21.88■■□□□ 1.09
C9orf43-202ENST00000374165 POLA2Q14181 598 aa21.87■■□□□ 1.09
C9orf43-202ENST00000374165 PRR5LQ6MZQ0 368 aa21.87■■□□□ 1.09
C9orf43-202ENST00000374165 PSDA5PKW4 1024 aaPredicted RBP21.87■■□□□ 1.09
C9orf43-202ENST00000374165 PDE8AO60658 829 aa21.87■■□□□ 1.09
C9orf43-202ENST00000374165 NYXQ9GZU5 481 aa21.87■■□□□ 1.09
C9orf43-202ENST00000374165 CSF1RP07333 972 aa21.86■■□□□ 1.09
C9orf43-202ENST00000374165 PA2G4Q9UQ80 394 aaKnown RBP21.86■■□□□ 1.09
C9orf43-202ENST00000374165 CHMP3Q9Y3E7 222 aa21.86■■□□□ 1.09
C9orf43-202ENST00000374165 CTSWP56202 376 aa21.85■■□□□ 1.09
C9orf43-202ENST00000374165 SKAP1Q86WV1 359 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms