RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 GOLGA6L6A8MZA4 724 aa17.2■□□□□ 0.34
A1CF-202ENST00000373993 PTGER2P43116 358 aa17.2■□□□□ 0.34
A1CF-202ENST00000373993 MTHFSP49914 203 aa17.2■□□□□ 0.34
A1CF-202ENST00000373993 CUL4AQ13619 759 aa17.2■□□□□ 0.34
A1CF-202ENST00000373993 SULT6B1Q6IMI4 303 aa17.2■□□□□ 0.34
A1CF-202ENST00000373993 KIAA1524Q8TCG1 905 aa17.2■□□□□ 0.34
A1CF-202ENST00000373993 PIGBQ92521 554 aa17.2■□□□□ 0.34
A1CF-202ENST00000373993 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
A1CF-202ENST00000373993 CGNQ9P2M7 1197 aaKnown RBP17.2■□□□□ 0.34
A1CF-202ENST00000373993 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
A1CF-202ENST00000373993 AK9Q5TCS8 1911 aa17.2■□□□□ 0.34
A1CF-202ENST00000373993 PNPLA7Q6ZV29 1317 aa17.2■□□□□ 0.34
A1CF-202ENST00000373993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.2■□□□□ 0.342e-8■■■■□ 21.1
A1CF-202ENST00000373993 TMOD3Q9NYL9 352 aa17.2■□□□□ 0.34
A1CF-202ENST00000373993 RBM27Q9P2N5 1060 aaKnown RBP17.2■□□□□ 0.34
A1CF-202ENST00000373993 MORC2Q9Y6X9 1032 aaPredicted RBP17.2■□□□□ 0.34
A1CF-202ENST00000373993 EPB41L2O43491 1005 aaKnown RBP17.19■□□□□ 0.34
A1CF-202ENST00000373993 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
A1CF-202ENST00000373993 TAF7LQ5H9L4 462 aa17.19■□□□□ 0.34
A1CF-202ENST00000373993 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
A1CF-202ENST00000373993 QSER1Q2KHR3 1735 aa17.19■□□□□ 0.34
A1CF-202ENST00000373993 ZNF530Q6P9A1 599 aaPredicted RBP17.19■□□□□ 0.34
A1CF-202ENST00000373993 IL13P35225 146 aa17.18■□□□□ 0.34
A1CF-202ENST00000373993 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
A1CF-202ENST00000373993 PLEKHO1Q53GL0 409 aaPredicted RBP17.18■□□□□ 0.34
A1CF-202ENST00000373993 TTC22Q5TAA0 569 aa17.17■□□□□ 0.34
A1CF-202ENST00000373993 PLEKHF1Q96S99 279 aa17.17■□□□□ 0.34
A1CF-202ENST00000373993 DDX41Q9UJV9 622 aaKnown RBP17.17■□□□□ 0.34
A1CF-202ENST00000373993 HMOX1P09601 288 aa17.17■□□□□ 0.34
A1CF-202ENST00000373993 CCDC183Q5T5S1 534 aa17.17■□□□□ 0.34
A1CF-202ENST00000373993 KDM4AO75164 1064 aa17.16■□□□□ 0.34
A1CF-202ENST00000373993 ZNF771Q7L3S4 317 aaPredicted RBP17.16■□□□□ 0.34
A1CF-202ENST00000373993 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
A1CF-202ENST00000373993 CALCOCO1Q9P1Z2 691 aa17.16■□□□□ 0.34
A1CF-202ENST00000373993 ASAP1Q9ULH1 1129 aa17.16■□□□□ 0.34
A1CF-202ENST00000373993 PAXBP1Q9Y5B6 917 aa17.16■□□□□ 0.34
A1CF-202ENST00000373993 GOLGB1Q14789 3259 aaKnown RBP17.16■□□□□ 0.34
A1CF-202ENST00000373993 CDK11BP21127 795 aaKnown RBP17.15■□□□□ 0.34
A1CF-202ENST00000373993 ANAPC15P60006 121 aa17.15■□□□□ 0.34
A1CF-202ENST00000373993 PLEKHM2Q8IWE5 1019 aa17.15■□□□□ 0.34
A1CF-202ENST00000373993 FHDC1Q9C0D6 1143 aaPredicted RBP17.15■□□□□ 0.34
A1CF-202ENST00000373993 CTNNA3Q9UI47 895 aa17.15■□□□□ 0.34
A1CF-202ENST00000373993 TRIM35Q9UPQ4 493 aa17.15■□□□□ 0.34
A1CF-202ENST00000373993 ADCY5O95622 1261 aa17.15■□□□□ 0.34
A1CF-202ENST00000373993 C1orf141Q5JVX7 400 aa17.15■□□□□ 0.34
A1CF-202ENST00000373993 DCTPP1Q9H773 170 aa17.15■□□□□ 0.34
A1CF-202ENST00000373993 C4BP0C0L5 1744 aa17.14■□□□□ 0.34
A1CF-202ENST00000373993 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
A1CF-202ENST00000373993 SGIP1Q9BQI5 828 aa17.14■□□□□ 0.33
A1CF-202ENST00000373993 SMTNL1A8MU46 457 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 RIOK3O14730 519 aaKnown RBP17.13■□□□□ 0.33
A1CF-202ENST00000373993 SLFN14P0C7P3 912 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 MSL1Q68DK7 614 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 TIGD1Q96MW7 591 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 LOC102724428A0A0B4J2F2 783 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
A1CF-202ENST00000373993 U2AF1L5P0DN76 240 aaPredicted RBP17.13■□□□□ 0.33
A1CF-202ENST00000373993 MX1P20591 662 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 SIK1P57059 783 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 U2AF1Q01081 240 aaKnown RBP eCLIP17.13■□□□□ 0.33
A1CF-202ENST00000373993 PKP1Q13835 747 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 SMIM5Q71RC9 77 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
A1CF-202ENST00000373993 AK7Q96M32 723 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 ABCC4O15439 1325 aa17.13■□□□□ 0.33
A1CF-202ENST00000373993 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
A1CF-202ENST00000373993 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
A1CF-202ENST00000373993 KDRP35968 1356 aa17.12■□□□□ 0.33
A1CF-202ENST00000373993 RNF214Q8ND24 703 aa17.12■□□□□ 0.33
A1CF-202ENST00000373993 DCAF5Q96JK2 942 aa17.12■□□□□ 0.33
A1CF-202ENST00000373993 WDR33Q9C0J8 1336 aaKnown RBP17.12■□□□□ 0.33
A1CF-202ENST00000373993 POLD1P28340 1107 aa17.11■□□□□ 0.33
A1CF-202ENST00000373993 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
A1CF-202ENST00000373993 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
A1CF-202ENST00000373993 FAM53CQ9NYF3 392 aa17.11■□□□□ 0.33
A1CF-202ENST00000373993 PLEKHG2Q9H7P9 1386 aa17.11■□□□□ 0.33
A1CF-202ENST00000373993 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
A1CF-202ENST00000373993 U2SURPO15042 1029 aaKnown RBP17.11■□□□□ 0.33
A1CF-202ENST00000373993 CABP4P57796 275 aa17.11■□□□□ 0.33
A1CF-202ENST00000373993 SLC16A10Q8TF71 515 aa17.11■□□□□ 0.33
A1CF-202ENST00000373993 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
A1CF-202ENST00000373993 ARID3AQ99856 593 aa17.11■□□□□ 0.33
A1CF-202ENST00000373993 SYT17Q9BSW7 474 aa17.11■□□□□ 0.33
A1CF-202ENST00000373993 NSFL1CQ9UNZ2 370 aaKnown RBP17.11■□□□□ 0.33
A1CF-202ENST00000373993 TULP2O00295 520 aa17.1■□□□□ 0.33
A1CF-202ENST00000373993 TERF2Q15554 542 aa17.1■□□□□ 0.33
A1CF-202ENST00000373993 ZGPATQ8N5A5 531 aaKnown RBP17.1■□□□□ 0.33
A1CF-202ENST00000373993 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
A1CF-202ENST00000373993 API5Q9BZZ5 524 aaKnown RBP17.1■□□□□ 0.33
A1CF-202ENST00000373993 ERC2O15083 957 aa17.09■□□□□ 0.33
A1CF-202ENST00000373993 U2AF2P26368 475 aaKnown RBP eCLIP17.09■□□□□ 0.339e-10■■■□□ 16.6
A1CF-202ENST00000373993 SLFNL1Q499Z3 407 aa17.09■□□□□ 0.33
A1CF-202ENST00000373993 AMIGO3Q86WK7 504 aa17.09■□□□□ 0.33
A1CF-202ENST00000373993 COL3A1P02461 1466 aaPredicted RBP17.09■□□□□ 0.33
A1CF-202ENST00000373993 UBR3Q6ZT12 1888 aa17.09■□□□□ 0.33
A1CF-202ENST00000373993 ERVV-2B6SEH9 535 aa17.09■□□□□ 0.33
A1CF-202ENST00000373993 ITPK1Q13572 414 aa17.09■□□□□ 0.33
A1CF-202ENST00000373993 KRT222Q8N1A0 295 aa17.09■□□□□ 0.33
A1CF-202ENST00000373993 RNF20Q5VTR2 975 aa17.08■□□□□ 0.33
A1CF-202ENST00000373993 RPAP2Q8IXW5 612 aaPredicted RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1188.9 ms