RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 CC2D1AQ6P1N0 951 aaPredicted RBP11.23□□□□□ -0.61
SF3A3-201ENST00000373019 SARM1Q6SZW1 724 aa11.23□□□□□ -0.61
SF3A3-201ENST00000373019 MRFAP1L1Q96HT8 127 aa11.23□□□□□ -0.61
SF3A3-201ENST00000373019 DNAJC25Q9H1X3 360 aa11.23□□□□□ -0.61
SF3A3-201ENST00000373019 EPC1Q9H2F5 836 aa11.23□□□□□ -0.61
SF3A3-201ENST00000373019 ZSCAN16Q9H4T2 348 aaPredicted RBP11.23□□□□□ -0.61
SF3A3-201ENST00000373019 MED4Q9NPJ6 270 aa11.23□□□□□ -0.61
SF3A3-201ENST00000373019 H3BQF6 201 aa11.23□□□□□ -0.61
SF3A3-201ENST00000373019 KIF2AO00139 706 aaPredicted RBP11.23□□□□□ -0.61
SF3A3-201ENST00000373019 FANCGO15287 622 aa11.23□□□□□ -0.61
SF3A3-201ENST00000373019 SNW1Q13573 536 aaKnown RBP11.23□□□□□ -0.61
SF3A3-201ENST00000373019 CCDC91Q7Z6B0 441 aa11.23□□□□□ -0.61
SF3A3-201ENST00000373019 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
SF3A3-201ENST00000373019 ARGLU1Q9NWB6 273 aaPredicted RBP11.23□□□□□ -0.61
SF3A3-201ENST00000373019 ATP6V1DQ9Y5K8 247 aa11.23□□□□□ -0.61
SF3A3-201ENST00000373019 FAM135BQ49AJ0 1406 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 PATL2C9JE40 543 aaKnown RBP11.22□□□□□ -0.61
SF3A3-201ENST00000373019 PDE1AP54750 535 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 AK7Q96M32 723 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 PRAM1Q96QH2 718 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 IL25Q9H293 177 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 COL3A1P02461 1466 aaPredicted RBP11.22□□□□□ -0.61
SF3A3-201ENST00000373019 TTC21BQ7Z4L5 1316 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 VWDEQ8N2E2 1590 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 CORO7P57737 925 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 IQCB1Q15051 598 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 CEP85Q6P2H3 762 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 DACT1Q9NYF0 836 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 MSH6P52701 1360 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 MYO3AQ8NEV4 1616 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 CEP170BQ9Y4F5 1589 aaPredicted RBP11.22□□□□□ -0.61
SF3A3-201ENST00000373019 MCTP2Q6DN12 878 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 PPP1R13BQ96KQ4 1090 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 TTC14Q96N46 770 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 FUT8Q9BYC5 575 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 TNMDQ9H2S6 317 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 ANO2Q9NQ90 1003 aa11.22□□□□□ -0.61
SF3A3-201ENST00000373019 SPATA31D1Q6ZQQ2 1576 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 TADA3O75528 432 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 GNAI3P08754 354 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 UBXN4Q92575 508 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 RIMS2Q9UQ26 1411 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 KIF1CO43896 1103 aaKnown RBP11.21□□□□□ -0.61
SF3A3-201ENST00000373019 RPS6KA5O75582 802 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 CPP00450 1065 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 MCCP23508 829 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 TSHZ3Q63HK5 1081 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 PPM1EQ8WY54 764 aa11.21□□□□□ -0.61
SF3A3-201ENST00000373019 SBNO2Q9Y2G9 1366 aa11.21□□□□□ -0.62
SF3A3-201ENST00000373019 RUFY3Q7L099 469 aa11.21□□□□□ -0.62
SF3A3-201ENST00000373019 FAM212AQ96EL1 285 aa11.21□□□□□ -0.62
SF3A3-201ENST00000373019 CEP89Q96ST8 783 aa11.21□□□□□ -0.62
SF3A3-201ENST00000373019 YTHDC2Q9H6S0 1430 aaKnown RBP11.2□□□□□ -0.62
SF3A3-201ENST00000373019 CHMLP26374 656 aa11.2□□□□□ -0.62
SF3A3-201ENST00000373019 PREX1Q8TCU6 1659 aa11.2□□□□□ -0.62
SF3A3-201ENST00000373019 ELL2O00472 640 aaPredicted RBP11.2□□□□□ -0.62
SF3A3-201ENST00000373019 LARGE1O95461 756 aa11.2□□□□□ -0.62
SF3A3-201ENST00000373019 IVLP07476 585 aa11.2□□□□□ -0.62
SF3A3-201ENST00000373019 MMS22LQ6ZRQ5 1243 aa11.2□□□□□ -0.62
SF3A3-201ENST00000373019 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
SF3A3-201ENST00000373019 CCDC158Q5M9N0 1113 aa11.2□□□□□ -0.62
SF3A3-201ENST00000373019 NBPF6Q5VWK0 638 aa11.2□□□□□ -0.62
SF3A3-201ENST00000373019 NBPF4Q96M43 638 aa11.2□□□□□ -0.62
SF3A3-201ENST00000373019 SALL3Q9BXA9 1300 aa11.19□□□□□ -0.62
SF3A3-201ENST00000373019 AK2P54819 239 aa11.19□□□□□ -0.62
SF3A3-201ENST00000373019 RPAP2Q8IXW5 612 aaPredicted RBP11.19□□□□□ -0.62
SF3A3-201ENST00000373019 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
SF3A3-201ENST00000373019 HSPA4P34932 840 aa11.19□□□□□ -0.62
SF3A3-201ENST00000373019 KRT24Q2M2I5 525 aa11.19□□□□□ -0.62
SF3A3-201ENST00000373019 GORABQ5T7V8 394 aa11.19□□□□□ -0.62
SF3A3-201ENST00000373019 PDRG1Q9NUG6 133 aa11.19□□□□□ -0.62
SF3A3-201ENST00000373019 LMTK3Q96Q04 1460 aa11.19□□□□□ -0.62
SF3A3-201ENST00000373019 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
SF3A3-201ENST00000373019 CLSTN2Q9H4D0 955 aa11.19□□□□□ -0.62
SF3A3-201ENST00000373019 EFCAB8A8MWE9 144 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 GJB2P29033 226 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 LTKP29376 864 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 TMEM132EQ6IEE7 984 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 FAM173BQ6P4H8 233 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 NBPF11Q86T75 865 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 SMC3Q9UQE7 1217 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 TTC21AQ8NDW8 1320 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 NR1I2O75469 434 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 MAP2K2P36507 400 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 C11orf57Q6ZUT1 292 aaPredicted RBP11.18□□□□□ -0.62
SF3A3-201ENST00000373019 CEP120Q8N960 986 aa11.18□□□□□ -0.62
SF3A3-201ENST00000373019 IFIT2P09913 472 aaKnown RBP11.17□□□□□ -0.62
SF3A3-201ENST00000373019 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
SF3A3-201ENST00000373019 TRIM65Q6PJ69 517 aa11.17□□□□□ -0.62
SF3A3-201ENST00000373019 LEKR1Q6ZMV7 388 aa11.17□□□□□ -0.62
SF3A3-201ENST00000373019 TRPM2O94759 1503 aa11.17□□□□□ -0.62
SF3A3-201ENST00000373019 NPHP4O75161 1426 aaPredicted RBP11.17□□□□□ -0.62
SF3A3-201ENST00000373019 MAP2K7O14733 419 aa11.17□□□□□ -0.62
SF3A3-201ENST00000373019 ATP6V1AP38606 617 aa11.17□□□□□ -0.62
SF3A3-201ENST00000373019 TMED8Q6PL24 325 aaPredicted RBP11.17□□□□□ -0.62
SF3A3-201ENST00000373019 CWC27Q6UX04 472 aaKnown RBP11.17□□□□□ -0.62
SF3A3-201ENST00000373019 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms