RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 CHMP4AQ9BY43 222 aa21.5■■□□□ 1.03
HNF4A-203ENST00000372920 NMIQ13287 307 aaPredicted RBP21.49■■□□□ 1.03
HNF4A-203ENST00000372920 RIOK3O14730 519 aaKnown RBP21.49■■□□□ 1.03
HNF4A-203ENST00000372920 SLC27A2O14975 620 aa21.49■■□□□ 1.03
HNF4A-203ENST00000372920 CHAF1AQ13111 956 aaPredicted RBP21.49■■□□□ 1.03
HNF4A-203ENST00000372920 LUZP1Q86V48 1076 aa21.49■■□□□ 1.03
HNF4A-203ENST00000372920 PTGS1P23219 599 aa21.49■■□□□ 1.03
HNF4A-203ENST00000372920 MAP3K2Q9Y2U5 619 aa21.49■■□□□ 1.03
HNF4A-203ENST00000372920 MED1Q15648 1581 aaPredicted RBP21.48■■□□□ 1.03
HNF4A-203ENST00000372920 MARF1Q9Y4F3 1742 aaKnown RBP21.48■■□□□ 1.03
HNF4A-203ENST00000372920 PDCP20941 246 aa21.48■■□□□ 1.03
HNF4A-203ENST00000372920 PSMA5P28066 241 aa21.48■■□□□ 1.03
HNF4A-203ENST00000372920 TCEANC2Q96MN5 208 aa21.48■■□□□ 1.03
HNF4A-203ENST00000372920 PDIA4P13667 645 aaKnown RBP21.47■■□□□ 1.03
HNF4A-203ENST00000372920 PPP4R3BQ5MIZ7 849 aa21.47■■□□□ 1.03
HNF4A-203ENST00000372920 CKAP2LQ8IYA6 745 aa21.47■■□□□ 1.03
HNF4A-203ENST00000372920 TBX22Q9Y458 520 aa21.47■■□□□ 1.03
HNF4A-203ENST00000372920 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.47■■□□□ 1.03
HNF4A-203ENST00000372920 BTBD11A6QL63 1104 aa21.47■■□□□ 1.03
HNF4A-203ENST00000372920 DACT1Q9NYF0 836 aa21.47■■□□□ 1.03
HNF4A-203ENST00000372920 DBF4Q9UBU7 674 aaPredicted RBP21.47■■□□□ 1.03
HNF4A-203ENST00000372920 ALDH1L1O75891 902 aa21.47■■□□□ 1.03
HNF4A-203ENST00000372920 NBPF6Q5VWK0 638 aa21.47■■□□□ 1.03
HNF4A-203ENST00000372920 NBPF4Q96M43 638 aa21.47■■□□□ 1.03
HNF4A-203ENST00000372920 TNMDQ9H2S6 317 aa21.47■■□□□ 1.03
HNF4A-203ENST00000372920 CWF19L2Q2TBE0 894 aaKnown RBP21.46■■□□□ 1.03
HNF4A-203ENST00000372920 HIP1O00291 1037 aa21.46■■□□□ 1.03
HNF4A-203ENST00000372920 TEFQ10587 303 aa21.46■■□□□ 1.03
HNF4A-203ENST00000372920 C14orf37Q86TY3 774 aa21.46■■□□□ 1.03
HNF4A-203ENST00000372920 BLOC1S2Q6QNY1 142 aa21.45■■□□□ 1.03
HNF4A-203ENST00000372920 EAF2Q96CJ1 260 aaPredicted RBP21.45■■□□□ 1.03
HNF4A-203ENST00000372920 ANO6Q4KMQ2 910 aa21.45■■□□□ 1.02
HNF4A-203ENST00000372920 CBX8Q9HC52 389 aa21.45■■□□□ 1.02
HNF4A-203ENST00000372920 TFIP11Q9UBB9 837 aaKnown RBP21.45■■□□□ 1.02
HNF4A-203ENST00000372920 TAF6LQ9Y6J9 622 aa21.45■■□□□ 1.02
HNF4A-203ENST00000372920 A0A0D9SFI3 127 aa21.45■■□□□ 1.02
HNF4A-203ENST00000372920 SASH1O94885 1247 aa21.45■■□□□ 1.02
HNF4A-203ENST00000372920 CBX1P83916 185 aa21.45■■□□□ 1.02
HNF4A-203ENST00000372920 PROSER3Q2NL68 480 aa21.45■■□□□ 1.02
HNF4A-203ENST00000372920 SCAND2PQ9GZW5 306 aaPredicted RBP21.45■■□□□ 1.02
HNF4A-203ENST00000372920 CCDC8Q9H0W5 538 aaPredicted RBP21.45■■□□□ 1.02
HNF4A-203ENST00000372920 SNRKQ9NRH2 765 aa21.45■■□□□ 1.02
HNF4A-203ENST00000372920 KDM3BQ7LBC6 1761 aa21.44■■□□□ 1.02
HNF4A-203ENST00000372920 ATP2B3Q16720 1220 aa21.44■■□□□ 1.02
HNF4A-203ENST00000372920 SPATA32Q96LK8 384 aa21.44■■□□□ 1.02
HNF4A-203ENST00000372920 GOLGA6L4A6NEF3 574 aa21.44■■□□□ 1.02
HNF4A-203ENST00000372920 ANKRD1Q15327 319 aa21.44■■□□□ 1.02
HNF4A-203ENST00000372920 LARP1Q6PKG0 1096 aaKnown RBP21.44■■□□□ 1.02
HNF4A-203ENST00000372920 ZSCAN20P17040 1043 aaPredicted RBP21.44■■□□□ 1.02
HNF4A-203ENST00000372920 RPS6KB1P23443 525 aa21.44■■□□□ 1.02
HNF4A-203ENST00000372920 KSR2Q6VAB6 950 aa21.44■■□□□ 1.02
HNF4A-203ENST00000372920 CCDC186Q7Z3E2 898 aa21.44■■□□□ 1.02
HNF4A-203ENST00000372920 TOB2Q14106 344 aaPredicted RBP21.43■■□□□ 1.02
HNF4A-203ENST00000372920 MPRIPQ6WCQ1 1025 aa21.43■■□□□ 1.02
HNF4A-203ENST00000372920 TLR7Q9NYK1 1049 aaKnown RBP21.43■■□□□ 1.02
HNF4A-203ENST00000372920 NPHP4O75161 1426 aaPredicted RBP21.43■■□□□ 1.02
HNF4A-203ENST00000372920 ANKARQ7Z5J8 1434 aa21.43■■□□□ 1.02
HNF4A-203ENST00000372920 RNF20Q5VTR2 975 aa21.43■■□□□ 1.02
HNF4A-203ENST00000372920 PDCL2Q8N4E4 241 aa21.43■■□□□ 1.02
HNF4A-203ENST00000372920 LEO1Q8WVC0 666 aaPredicted RBP21.43■■□□□ 1.02
HNF4A-203ENST00000372920 IP6K1Q92551 441 aa21.43■■□□□ 1.02
HNF4A-203ENST00000372920 CEBPAP49715 358 aaPredicted RBP21.42■■□□□ 1.02
HNF4A-203ENST00000372920 NPHP3Q7Z494 1330 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 DMTNQ08495 405 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 SUCLG2Q96I99 432 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 FSD1Q9BTV5 496 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 BOLA2Q9H3K6 86 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 DDX19AQ9NUU7 478 aaKnown RBP21.42■■□□□ 1.02
HNF4A-203ENST00000372920 HDAC5Q9UQL6 1122 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 CHD2O14647 1828 aaKnown RBP21.42■■□□□ 1.02
HNF4A-203ENST00000372920 CTIFO43310 598 aaKnown RBP21.42■■□□□ 1.02
HNF4A-203ENST00000372920 LRMPQ12912 555 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 STK3Q13188 491 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
HNF4A-203ENST00000372920 ANKRD7Q92527 254 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 KAZALD1Q96I82 304 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 CLSTN2Q9H4D0 955 aa21.42■■□□□ 1.02
HNF4A-203ENST00000372920 G3BP1Q13283 466 aaKnown RBP eCLIP21.41■■□□□ 1.026e-9■□□□□ 9.6
HNF4A-203ENST00000372920 RBM43Q6ZSC3 357 aaKnown RBP21.41■■□□□ 1.02
HNF4A-203ENST00000372920 DRC7Q8IY82 874 aa21.41■■□□□ 1.02
HNF4A-203ENST00000372920 NRBP1Q9UHY1 535 aa21.41■■□□□ 1.02
HNF4A-203ENST00000372920 AKAP4Q5JQC9 854 aa21.41■■□□□ 1.02
HNF4A-203ENST00000372920 ALDH8A1Q9H2A2 487 aaPredicted RBP21.41■■□□□ 1.02
HNF4A-203ENST00000372920 BICC1Q9H694 974 aaKnown RBP21.4■■□□□ 1.02
HNF4A-203ENST00000372920 ZNF75DP51815 510 aa21.4■■□□□ 1.02
HNF4A-203ENST00000372920 PLA2G4DQ86XP0 818 aa21.4■■□□□ 1.02
HNF4A-203ENST00000372920 ADGRL3Q9HAR2 1447 aa21.4■■□□□ 1.02
HNF4A-203ENST00000372920 MED23Q9ULK4 1368 aa21.4■■□□□ 1.02
HNF4A-203ENST00000372920 UTP14CQ5TAP6 766 aaKnown RBP21.4■■□□□ 1.02
HNF4A-203ENST00000372920 TRIM5Q9C035 493 aa21.4■■□□□ 1.02
HNF4A-203ENST00000372920 USP54Q70EL1 1684 aa21.4■■□□□ 1.02
HNF4A-203ENST00000372920 GRM8O00222 908 aa21.39■■□□□ 1.02
HNF4A-203ENST00000372920 NR1I2O75469 434 aa21.39■■□□□ 1.02
HNF4A-203ENST00000372920 ZNF589Q86UQ0 364 aaPredicted RBP21.39■■□□□ 1.02
HNF4A-203ENST00000372920 GIGYF1O75420 1035 aaPredicted RBP21.39■■□□□ 1.01
HNF4A-203ENST00000372920 PRAMEF22A3QJZ6 481 aa21.39■■□□□ 1.01
HNF4A-203ENST00000372920 TDRD7Q8NHU6 1098 aaKnown RBP21.39■■□□□ 1.01
HNF4A-203ENST00000372920 PGBD1Q96JS3 809 aa21.39■■□□□ 1.01
HNF4A-203ENST00000372920 SIL1Q9H173 461 aa21.38■■□□□ 1.01
HNF4A-203ENST00000372920 ZSCAN25Q6NSZ9 544 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms