RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 RTN4Q9NQC3 1192 aaKnown RBP21.73■■□□□ 1.07
CD40-201ENST00000372276 ROBO1Q9Y6N7 1651 aa21.73■■□□□ 1.07
CD40-201ENST00000372276 CYP46A1Q9Y6A2 500 aa21.73■■□□□ 1.07
CD40-201ENST00000372276 GAS2L3Q86XJ1 694 aa21.72■■□□□ 1.07
CD40-201ENST00000372276 EAF2Q96CJ1 260 aaPredicted RBP21.72■■□□□ 1.07
CD40-201ENST00000372276 TRIM44Q96DX7 344 aaPredicted RBP21.72■■□□□ 1.07
CD40-201ENST00000372276 IL25Q9H293 177 aa21.72■■□□□ 1.07
CD40-201ENST00000372276 CCDC171Q6TFL3 1326 aa21.71■■□□□ 1.07
CD40-201ENST00000372276 WDR17Q8IZU2 1322 aa21.71■■□□□ 1.07
CD40-201ENST00000372276 ZSCAN23Q3MJ62 389 aa21.71■■□□□ 1.07
CD40-201ENST00000372276 PANK2Q9BZ23 570 aa21.71■■□□□ 1.07
CD40-201ENST00000372276 ZSWIM6Q9HCJ5 1215 aa21.71■■□□□ 1.07
CD40-201ENST00000372276 NASPP49321 788 aaPredicted RBP21.7■■□□□ 1.06
CD40-201ENST00000372276 ANKRD1Q15327 319 aa21.7■■□□□ 1.06
CD40-201ENST00000372276 CAVIN1Q6NZI2 390 aaKnown RBP21.7■■□□□ 1.06
CD40-201ENST00000372276 BRINP3Q76B58 766 aa21.7■■□□□ 1.06
CD40-201ENST00000372276 MAP4K1Q92918 833 aa21.7■■□□□ 1.06
CD40-201ENST00000372276 ALDH8A1Q9H2A2 487 aaPredicted RBP21.7■■□□□ 1.06
CD40-201ENST00000372276 HMG20BQ9P0W2 317 aa21.7■■□□□ 1.06
CD40-201ENST00000372276 USP16Q9Y5T5 823 aa21.7■■□□□ 1.06
CD40-201ENST00000372276 ATP5JP18859 108 aa21.69■■□□□ 1.06
CD40-201ENST00000372276 NECTIN1Q15223 517 aa21.69■■□□□ 1.06
CD40-201ENST00000372276 NKX1-1Q15270 411 aaPredicted RBP21.69■■□□□ 1.06
CD40-201ENST00000372276 CSPP1Q1MSJ5 1256 aa21.69■■□□□ 1.06
CD40-201ENST00000372276 ZCRB1Q8TBF4 217 aaKnown RBP21.69■■□□□ 1.06
CD40-201ENST00000372276 ARXQ96QS3 562 aa21.69■■□□□ 1.06
CD40-201ENST00000372276 PHF14O94880 888 aa21.69■■□□□ 1.06
CD40-201ENST00000372276 AK2P54819 239 aa21.69■■□□□ 1.06
CD40-201ENST00000372276 PPP1R9BQ96SB3 815 aa21.69■■□□□ 1.06
CD40-201ENST00000372276 PDRG1Q9NUG6 133 aa21.69■■□□□ 1.06
CD40-201ENST00000372276 AFDNP55196 1824 aaKnown RBP21.69■■□□□ 1.06
CD40-201ENST00000372276 CASTP20810 708 aaKnown RBP21.68■■□□□ 1.06
CD40-201ENST00000372276 HSPA1LP34931 641 aa21.68■■□□□ 1.06
CD40-201ENST00000372276 CHRNA2Q15822 529 aa21.68■■□□□ 1.06
CD40-201ENST00000372276 TMEM87AQ8NBN3 555 aa21.68■■□□□ 1.06
CD40-201ENST00000372276 SMC3Q9UQE7 1217 aa21.68■■□□□ 1.06
CD40-201ENST00000372276 ARFGEF2Q9Y6D5 1785 aa21.68■■□□□ 1.06
CD40-201ENST00000372276 KCNJ4P48050 445 aa21.67■■□□□ 1.06
CD40-201ENST00000372276 RUFY3Q7L099 469 aa21.67■■□□□ 1.06
CD40-201ENST00000372276 RASEFQ8IZ41 740 aa21.67■■□□□ 1.06
CD40-201ENST00000372276 CABLES1Q8TDN4 633 aa21.67■■□□□ 1.06
CD40-201ENST00000372276 FSD1Q9BTV5 496 aa21.67■■□□□ 1.06
CD40-201ENST00000372276 RFX5P48382 616 aaPredicted RBP21.66■■□□□ 1.06
CD40-201ENST00000372276 KRT32Q14532 448 aa21.66■■□□□ 1.06
CD40-201ENST00000372276 TSGA10IPQ3SY00 556 aa21.66■■□□□ 1.06
CD40-201ENST00000372276 CCDC8Q9H0W5 538 aaPredicted RBP21.66■■□□□ 1.06
CD40-201ENST00000372276 GPR108Q9NPR9 543 aa21.66■■□□□ 1.06
CD40-201ENST00000372276 SOS2Q07890 1332 aaPredicted RBP21.66■■□□□ 1.06
CD40-201ENST00000372276 PRPF40BQ6NWY9 871 aaKnown RBP21.66■■□□□ 1.06
CD40-201ENST00000372276 LRSAM1Q6UWE0 723 aa21.66■■□□□ 1.06
CD40-201ENST00000372276 GPT2Q8TD30 523 aa21.66■■□□□ 1.06
CD40-201ENST00000372276 DDX17Q92841 729 aaKnown RBP21.66■■□□□ 1.06
CD40-201ENST00000372276 JAKMIP1Q96N16 626 aaKnown RBP21.66■■□□□ 1.06
CD40-201ENST00000372276 CARD10Q9BWT7 1032 aa21.66■■□□□ 1.06
CD40-201ENST00000372276 PRDM11Q9NQV5 511 aa21.66■■□□□ 1.06
CD40-201ENST00000372276 A0A087WZG4 1122 aa21.65■■□□□ 1.06
CD40-201ENST00000372276 CLCN1P35523 988 aa21.65■■□□□ 1.06
CD40-201ENST00000372276 PTPN12Q05209 780 aaKnown RBP21.65■■□□□ 1.06
CD40-201ENST00000372276 RBM8AQ9Y5S9 174 aaKnown RBP21.65■■□□□ 1.06
CD40-201ENST00000372276 H7C1W4 665 aa21.64■■□□□ 1.05
CD40-201ENST00000372276 LETM1O95202 739 aaPredicted RBP21.64■■□□□ 1.05
CD40-201ENST00000372276 ZSCAN22P10073 491 aaPredicted RBP21.64■■□□□ 1.05
CD40-201ENST00000372276 PTH1RQ03431 593 aa21.64■■□□□ 1.05
CD40-201ENST00000372276 NMIQ13287 307 aaPredicted RBP21.64■■□□□ 1.05
CD40-201ENST00000372276 HS1BP3Q53T59 392 aa21.64■■□□□ 1.05
CD40-201ENST00000372276 TNNI3KQ59H18 835 aa21.64■■□□□ 1.05
CD40-201ENST00000372276 CREB3L3Q68CJ9 461 aa21.64■■□□□ 1.05
CD40-201ENST00000372276 NOL8Q76FK4 1167 aaKnown RBP21.64■■□□□ 1.05
CD40-201ENST00000372276 ATG3Q9NT62 314 aa21.64■■□□□ 1.05
CD40-201ENST00000372276 FPGT-TNNI3KV9GXZ4 949 aa21.64■■□□□ 1.05
CD40-201ENST00000372276 JCADQ9P266 1359 aa21.64■■□□□ 1.05
CD40-201ENST00000372276 UBR2Q8IWV8 1755 aa21.64■■□□□ 1.05
CD40-201ENST00000372276 TOM1L2Q6ZVM7 507 aa21.63■■□□□ 1.05
CD40-201ENST00000372276 SIL1Q9H173 461 aa21.63■■□□□ 1.05
CD40-201ENST00000372276 MED23Q9ULK4 1368 aa21.63■■□□□ 1.05
CD40-201ENST00000372276 AHDC1Q5TGY3 1603 aaPredicted RBP21.63■■□□□ 1.05
CD40-201ENST00000372276 STX6O43752 255 aa21.62■■□□□ 1.05
CD40-201ENST00000372276 IL2RBP14784 551 aa21.62■■□□□ 1.05
CD40-201ENST00000372276 CASP7P55210 303 aa21.62■■□□□ 1.05
CD40-201ENST00000372276 EPHA10Q5JZY3 1008 aa21.62■■□□□ 1.05
CD40-201ENST00000372276 UBE3BQ7Z3V4 1068 aa21.62■■□□□ 1.05
CD40-201ENST00000372276 CCDC191Q8NCU4 936 aa21.62■■□□□ 1.05
CD40-201ENST00000372276 BOLA2Q9H3K6 86 aa21.62■■□□□ 1.05
CD40-201ENST00000372276 CWC25Q9NXE8 425 aaPredicted RBP21.62■■□□□ 1.05
CD40-201ENST00000372276 PDCP20941 246 aa21.62■■□□□ 1.05
CD40-201ENST00000372276 TEX13AQ9BXU3 409 aaPredicted RBP21.62■■□□□ 1.05
CD40-201ENST00000372276 RPAP1Q9BWH6 1393 aaPredicted RBP21.62■■□□□ 1.05
CD40-201ENST00000372276 GLI3P10071 1580 aa21.61■■□□□ 1.05
CD40-201ENST00000372276 FBXO3Q9UK99 471 aa21.61■■□□□ 1.05
CD40-201ENST00000372276 PAPPAQ13219 1627 aa21.6■■□□□ 1.05
CD40-201ENST00000372276 COL5A2P05997 1499 aaPredicted RBP21.6■■□□□ 1.05
CD40-201ENST00000372276 SLC27A2O14975 620 aa21.6■■□□□ 1.05
CD40-201ENST00000372276 USPL1Q5W0Q7 1092 aa21.6■■□□□ 1.05
CD40-201ENST00000372276 ESPNB1AK53 854 aa21.59■■□□□ 1.05
CD40-201ENST00000372276 BLOC1S2Q6QNY1 142 aa21.59■■□□□ 1.05
CD40-201ENST00000372276 HAUS7Q99871 368 aa21.59■■□□□ 1.05
CD40-201ENST00000372276 U3KPZ7 1027 aaPredicted RBP21.59■■□□□ 1.05
CD40-201ENST00000372276 NHSL1Q5SYE7 1610 aa21.59■■□□□ 1.05
CD40-201ENST00000372276 SYT1P21579 422 aa21.58■■□□□ 1.05
CD40-201ENST00000372276 IL15P40933 162 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms